RNA–Protein interactions for RNA: ENST00000448535.1

AC009963.4-201, humanhuman

BASIC

Gene AC009963.4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009963.4-201ENST00000448535 TLN1Q9Y490 2541 aaKnown RBP3.31□□□□□ -1.88
AC009963.4-201ENST00000448535 SPINK1P00995 79 aa3.31□□□□□ -1.88
AC009963.4-201ENST00000448535 PTPN13Q12923 2485 aa3.31□□□□□ -1.88
AC009963.4-201ENST00000448535 BSNQ9UPA5 3926 aa3.31□□□□□ -1.88
AC009963.4-201ENST00000448535 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
AC009963.4-201ENST00000448535 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
AC009963.4-201ENST00000448535 AKAP9Q99996 3911 aa3.3□□□□□ -1.88
AC009963.4-201ENST00000448535 SETXQ7Z333 2677 aaKnown RBP3.29□□□□□ -1.88
AC009963.4-201ENST00000448535 ATMQ13315 3056 aa3.28□□□□□ -1.88
AC009963.4-201ENST00000448535 CEP295Q9C0D2 2601 aa3.28□□□□□ -1.88
AC009963.4-201ENST00000448535 IGF2RP11717 2491 aa3.28□□□□□ -1.88
AC009963.4-201ENST00000448535 SPACA4Q8TDM5 124 aa3.28□□□□□ -1.88
AC009963.4-201ENST00000448535 COL12A1Q99715 3063 aa3.28□□□□□ -1.88
AC009963.4-201ENST00000448535 ANKRD17O75179 2603 aaKnown RBP3.27□□□□□ -1.89
AC009963.4-201ENST00000448535 APCP25054 2843 aa3.27□□□□□ -1.89
AC009963.4-201ENST00000448535 NOTCH2Q04721 2471 aa3.27□□□□□ -1.89
AC009963.4-201ENST00000448535 FN1P02751 2386 aaKnown RBP3.25□□□□□ -1.89
AC009963.4-201ENST00000448535 ASPMQ8IZT6 3477 aa3.25□□□□□ -1.89
AC009963.4-201ENST00000448535 TPRXLQ17RH7 258 aa3.25□□□□□ -1.89
AC009963.4-201ENST00000448535 CIRBP-AS1Q8TBR5 109 aa3.25□□□□□ -1.89
AC009963.4-201ENST00000448535 GVINP1Q7Z2Y8 2422 aa3.24□□□□□ -1.89
AC009963.4-201ENST00000448535 JMJD1CQ15652 2540 aa3.23□□□□□ -1.89
AC009963.4-201ENST00000448535 EYSQ5T1H1 3165 aa3.22□□□□□ -1.89
AC009963.4-201ENST00000448535 OTOGQ6ZRI0 2925 aa3.22□□□□□ -1.89
AC009963.4-201ENST00000448535 CRYBG3Q68DQ2 2970 aa3.21□□□□□ -1.9
AC009963.4-201ENST00000448535 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
AC009963.4-201ENST00000448535 UBE2DNLQ8IWF7 75 aa3.21□□□□□ -1.9
AC009963.4-201ENST00000448535 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
AC009963.4-201ENST00000448535 UTP20O75691 2785 aaKnown RBP3.19□□□□□ -1.9
AC009963.4-201ENST00000448535 HIVEP2P31629 2446 aa3.19□□□□□ -1.9
AC009963.4-201ENST00000448535 MYO9AB2RTY4 2548 aa3.19□□□□□ -1.9
AC009963.4-201ENST00000448535 NBPF19A0A087WUL8 3843 aa3.18□□□□□ -1.9
AC009963.4-201ENST00000448535 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
AC009963.4-201ENST00000448535 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
AC009963.4-201ENST00000448535 TEX15Q9BXT5 2789 aa3.18□□□□□ -1.9
AC009963.4-201ENST00000448535 GCN1Q92616 2671 aaKnown RBP3.17□□□□□ -1.9
AC009963.4-201ENST00000448535 VPS13CQ709C8 3753 aa3.16□□□□□ -1.9
AC009963.4-201ENST00000448535 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
AC009963.4-201ENST00000448535 RELNP78509 3460 aa3.16□□□□□ -1.9
AC009963.4-201ENST00000448535 PLAC4Q8WY50 150 aa3.15□□□□□ -1.91
AC009963.4-201ENST00000448535 S4R3F8 94 aa3.14□□□□□ -1.91
AC009963.4-201ENST00000448535 LAMA5O15230 3695 aa3.14□□□□□ -1.91
AC009963.4-201ENST00000448535 USP9XQ93008 2570 aaPredicted RBP3.14□□□□□ -1.91
AC009963.4-201ENST00000448535 DOPEY1Q5JWR5 2465 aa3.14□□□□□ -1.91
AC009963.4-201ENST00000448535 F8P00451 2351 aa3.14□□□□□ -1.91
AC009963.4-201ENST00000448535 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
AC009963.4-201ENST00000448535 RIF1Q5UIP0 2472 aaKnown RBP3.13□□□□□ -1.91
AC009963.4-201ENST00000448535 ZFYVE26Q68DK2 2539 aa3.13□□□□□ -1.91
AC009963.4-201ENST00000448535 DNAH1Q9P2D7 4330 aa3.12□□□□□ -1.91
AC009963.4-201ENST00000448535 SVEP1Q4LDE5 3571 aa3.12□□□□□ -1.91
AC009963.4-201ENST00000448535 ANK3Q12955 4377 aaKnown RBP3.12□□□□□ -1.91
AC009963.4-201ENST00000448535 MXRA5Q9NR99 2828 aa3.12□□□□□ -1.91
AC009963.4-201ENST00000448535 MUC6Q6W4X9 2439 aa3.11□□□□□ -1.91
AC009963.4-201ENST00000448535 PIEZO1Q92508 2521 aa3.11□□□□□ -1.91
AC009963.4-201ENST00000448535 Q6ZRN7 208 aaPredicted RBP3.11□□□□□ -1.91
AC009963.4-201ENST00000448535 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
AC009963.4-201ENST00000448535 LRRK2Q5S007 2527 aa3.11□□□□□ -1.91
AC009963.4-201ENST00000448535 ZNF462Q96JM2 2506 aa3.11□□□□□ -1.91
AC009963.4-201ENST00000448535 ZNF292O60281 2723 aa3.1□□□□□ -1.91
AC009963.4-201ENST00000448535 NAV2Q8IVL1 2488 aa3.1□□□□□ -1.91
AC009963.4-201ENST00000448535 NF1P21359 2839 aa3.09□□□□□ -1.91
AC009963.4-201ENST00000448535 CHD8Q9HCK8 2581 aa3.08□□□□□ -1.92
AC009963.4-201ENST00000448535 TTC28Q96AY4 2481 aa3.08□□□□□ -1.92
AC009963.4-201ENST00000448535 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
AC009963.4-201ENST00000448535 SONP18583 2426 aaKnown RBP3.08□□□□□ -1.92
AC009963.4-201ENST00000448535 A0A0D9SG42 100 aa3.07□□□□□ -1.92
AC009963.4-201ENST00000448535 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
AC009963.4-201ENST00000448535 UNC79Q9P2D8 2635 aa3.07□□□□□ -1.92
AC009963.4-201ENST00000448535 CENPEQ02224 2701 aa3.07□□□□□ -1.92
AC009963.4-201ENST00000448535 NBEAL2Q6ZNJ1 2754 aa3.06□□□□□ -1.92
AC009963.4-201ENST00000448535 M0QZ58 72 aa3.06□□□□□ -1.92
AC009963.4-201ENST00000448535 UBR5O95071 2799 aaPredicted RBP3.06□□□□□ -1.92
AC009963.4-201ENST00000448535 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
AC009963.4-201ENST00000448535 MUC3AQ02505 3323 aa3.05□□□□□ -1.92
AC009963.4-201ENST00000448535 BDP1A6H8Y1 2624 aa3.05□□□□□ -1.92
AC009963.4-201ENST00000448535 PRO2289Q9P1D8 64 aa3.05□□□□□ -1.92
AC009963.4-201ENST00000448535 MTORP42345 2549 aa3.05□□□□□ -1.92
AC009963.4-201ENST00000448535 CCDC168Q8NDH2 2452 aa3.04□□□□□ -1.92
AC009963.4-201ENST00000448535 FLG2Q5D862 2391 aaPredicted RBP3.04□□□□□ -1.92
AC009963.4-201ENST00000448535 EPG5Q9HCE0 2579 aa3.04□□□□□ -1.92
AC009963.4-201ENST00000448535 HIVEP1P15822 2718 aa3.04□□□□□ -1.92
AC009963.4-201ENST00000448535 CSMD2Q7Z408 3487 aa3.03□□□□□ -1.92
AC009963.4-201ENST00000448535 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
AC009963.4-201ENST00000448535 TENM4Q6N022 2769 aa3.03□□□□□ -1.92
AC009963.4-201ENST00000448535 USP9YO00507 2555 aaPredicted RBP3.03□□□□□ -1.93
AC009963.4-201ENST00000448535 KRTAP12-1P59990 96 aa3.02□□□□□ -1.93
AC009963.4-201ENST00000448535 CFAP46Q8IYW2 2715 aa3.01□□□□□ -1.93
AC009963.4-201ENST00000448535 HECTD1Q9ULT8 2610 aa3.01□□□□□ -1.93
AC009963.4-201ENST00000448535 PKD1L2Q7Z442 2459 aa3□□□□□ -1.93
AC009963.4-201ENST00000448535 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
AC009963.4-201ENST00000448535 ITPR3Q14573 2671 aa3□□□□□ -1.93
AC009963.4-201ENST00000448535 ZANQ9Y493 2812 aa3□□□□□ -1.93
AC009963.4-201ENST00000448535 VPS13DQ5THJ4 4388 aa3□□□□□ -1.93
AC009963.4-201ENST00000448535 FBN2P35556 2912 aa2.99□□□□□ -1.93
AC009963.4-201ENST00000448535 INE1O15225 51 aa2.99□□□□□ -1.93
AC009963.4-201ENST00000448535 MEGF8Q7Z7M0 2845 aa2.98□□□□□ -1.93
AC009963.4-201ENST00000448535 FBN1P35555 2871 aaKnown RBP2.98□□□□□ -1.93
AC009963.4-201ENST00000448535 ACACBO00763 2458 aa2.97□□□□□ -1.93
AC009963.4-201ENST00000448535 HELZ2Q9BYK8 2649 aaKnown RBP2.96□□□□□ -1.94
AC009963.4-201ENST00000448535 ANK2Q01484 3957 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 219.9 ms