RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 NIPBLQ6KC79 2804 aaeCLIP6.92□□□□□ -1.3
FN1-212ENST00000446046 Q8NDZ9 215 aa6.88□□□□□ -1.31
FN1-212ENST00000446046 MYO15AQ9UKN7 3530 aa6.88□□□□□ -1.31
FN1-212ENST00000446046 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
FN1-212ENST00000446046 LOC400499M0QZD8 3231 aa6.86□□□□□ -1.31
FN1-212ENST00000446046 ROMO1P60602 79 aa6.85□□□□□ -1.31
FN1-212ENST00000446046 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
FN1-212ENST00000446046 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
FN1-212ENST00000446046 PANO1I0J062 215 aa6.84□□□□□ -1.32
FN1-212ENST00000446046 DCHS2Q6V1P9 2916 aa6.84□□□□□ -1.32
FN1-212ENST00000446046 CELSR1Q9NYQ6 3014 aa6.83□□□□□ -1.32
FN1-212ENST00000446046 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
FN1-212ENST00000446046 ASPMQ8IZT6 3477 aa6.83□□□□□ -1.32
FN1-212ENST00000446046 A0A087X002 238 aa6.82□□□□□ -1.32
FN1-212ENST00000446046 TENM4Q6N022 2769 aa6.81□□□□□ -1.32
FN1-212ENST00000446046 Q5XG85 94 aa6.81□□□□□ -1.32
FN1-212ENST00000446046 ZANQ9Y493 2812 aa6.79□□□□□ -1.32
FN1-212ENST00000446046 Q6ZRN7 208 aaPredicted RBP6.75□□□□□ -1.33
FN1-212ENST00000446046 LAMA5O15230 3695 aa6.73□□□□□ -1.33
FN1-212ENST00000446046 Q5VV11 94 aa6.73□□□□□ -1.33
FN1-212ENST00000446046 FBN2P35556 2912 aa6.72□□□□□ -1.33
FN1-212ENST00000446046 A8MUU9 505 aa6.71□□□□□ -1.34
FN1-212ENST00000446046 TENM3Q9P273 2699 aa6.71□□□□□ -1.34
FN1-212ENST00000446046 ZFHX3Q15911 3703 aa6.7□□□□□ -1.34
FN1-212ENST00000446046 C20orf166-AS1Q96NR2 134 aa6.68□□□□□ -1.34
FN1-212ENST00000446046 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
FN1-212ENST00000446046 HRNRQ86YZ3 2850 aaPredicted RBP6.65□□□□□ -1.35
FN1-212ENST00000446046 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
FN1-212ENST00000446046 PKD1L1Q8TDX9 2849 aa6.58□□□□□ -1.36
FN1-212ENST00000446046 KRTAP13-1Q8IUC0 172 aa6.57□□□□□ -1.36
FN1-212ENST00000446046 SPATA8Q6RVD6 105 aa6.56□□□□□ -1.36
FN1-212ENST00000446046 MXRA5Q9NR99 2828 aa6.55□□□□□ -1.36
FN1-212ENST00000446046 TNP1P09430 55 aa6.55□□□□□ -1.36
FN1-212ENST00000446046 DCHS1Q96JQ0 3298 aa6.54□□□□□ -1.36
FN1-212ENST00000446046 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
FN1-212ENST00000446046 SPENQ96T58 3664 aaKnown RBP6.52□□□□□ -1.37
FN1-212ENST00000446046 DMDP11532 3685 aa6.51□□□□□ -1.37
FN1-212ENST00000446046 PDZD2O15018 2839 aa6.51□□□□□ -1.37
FN1-212ENST00000446046 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
FN1-212ENST00000446046 VWFP04275 2813 aa6.5□□□□□ -1.37
FN1-212ENST00000446046 TGP01266 2768 aa6.49□□□□□ -1.37
FN1-212ENST00000446046 TENM2Q9NT68 2774 aa6.49□□□□□ -1.37
FN1-212ENST00000446046 ZFHX4Q86UP3 3567 aa6.49□□□□□ -1.37
FN1-212ENST00000446046 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
FN1-212ENST00000446046 RELNP78509 3460 aa6.48□□□□□ -1.37
FN1-212ENST00000446046 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
FN1-212ENST00000446046 TPRXLQ17RH7 258 aa6.45□□□□□ -1.38
FN1-212ENST00000446046 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
FN1-212ENST00000446046 KRTAP7-1Q8IUC3 87 aa6.4□□□□□ -1.38
FN1-212ENST00000446046 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
FN1-212ENST00000446046 XP32Q5T750 250 aa6.34□□□□□ -1.39
FN1-212ENST00000446046 COL7A1Q02388 2944 aa6.34□□□□□ -1.4
FN1-212ENST00000446046 KRTAP25-1Q3LHN0 102 aa6.33□□□□□ -1.4
FN1-212ENST00000446046 CSMD1Q96PZ7 3565 aa6.33□□□□□ -1.4
FN1-212ENST00000446046 SMG1Q96Q15 3661 aaKnown RBP6.31□□□□□ -1.4
FN1-212ENST00000446046 KRTAP10-8P60410 259 aa6.31□□□□□ -1.4
FN1-212ENST00000446046 MUC3AQ02505 3323 aa6.29□□□□□ -1.4
FN1-212ENST00000446046 H3BS24 57 aa6.28□□□□□ -1.4
FN1-212ENST00000446046 A8MU10 97 aa6.27□□□□□ -1.41
FN1-212ENST00000446046 KRTAP1-4P0C5Y4 121 aa6.24□□□□□ -1.41
FN1-212ENST00000446046 KRTAP10-10P60014 251 aa6.24□□□□□ -1.41
FN1-212ENST00000446046 KRTAP16-1A8MUX0 517 aa6.23□□□□□ -1.41
FN1-212ENST00000446046 BSNQ9UPA5 3926 aa6.21□□□□□ -1.42
FN1-212ENST00000446046 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
FN1-212ENST00000446046 A6NN06 94 aa6.16□□□□□ -1.42
FN1-212ENST00000446046 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
FN1-212ENST00000446046 TRRAPQ9Y4A5 3859 aa6.15□□□□□ -1.43
FN1-212ENST00000446046 VPS13CQ709C8 3753 aa6.14□□□□□ -1.43
FN1-212ENST00000446046 FBN1P35555 2871 aaKnown RBP6.13□□□□□ -1.43
FN1-212ENST00000446046 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
FN1-212ENST00000446046 SRRM2Q9UQ35 2752 aaKnown RBP6.09□□□□□ -1.43
FN1-212ENST00000446046 SVEP1Q4LDE5 3571 aa6.09□□□□□ -1.43
FN1-212ENST00000446046 CUBNO60494 3623 aa6.06□□□□□ -1.44
FN1-212ENST00000446046 MEGF8Q7Z7M0 2845 aa6.03□□□□□ -1.44
FN1-212ENST00000446046 NDUFAF8A1L188 74 aa6□□□□□ -1.45
FN1-212ENST00000446046 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
FN1-212ENST00000446046 H0YAA0 97 aa5.95□□□□□ -1.46
FN1-212ENST00000446046 CSMD2Q7Z408 3487 aa5.94□□□□□ -1.46
FN1-212ENST00000446046 AKAP9Q99996 3911 aa5.91□□□□□ -1.46
FN1-212ENST00000446046 P0C880 135 aa5.9□□□□□ -1.46
FN1-212ENST00000446046 OTOGQ6ZRI0 2925 aa5.88□□□□□ -1.47
FN1-212ENST00000446046 ZNF469Q96JG9 3925 aaPredicted RBP5.83□□□□□ -1.48
FN1-212ENST00000446046 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
FN1-212ENST00000446046 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
FN1-212ENST00000446046 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
FN1-212ENST00000446046 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
FN1-212ENST00000446046 ANK3Q12955 4377 aaKnown RBP5.52□□□□□ -1.53
FN1-212ENST00000446046 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
FN1-212ENST00000446046 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
FN1-212ENST00000446046 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.55
FN1-212ENST00000446046 LYSTQ99698 3801 aa5.39□□□□□ -1.55
FN1-212ENST00000446046 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
FN1-212ENST00000446046 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
FN1-212ENST00000446046 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
FN1-212ENST00000446046 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
FN1-212ENST00000446046 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
FN1-212ENST00000446046 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
FN1-212ENST00000446046 DNAH7Q8WXX0 4024 aa5.25□□□□□ -1.57
FN1-212ENST00000446046 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
FN1-212ENST00000446046 CMYA5Q8N3K9 4069 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms