RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 NDUFC1O43677 76 aa8.12□□□□□ -1.11
RBM39-216ENST00000444878 KTN1-AS1Q86SY8 53 aa8.12□□□□□ -1.11
RBM39-216ENST00000444878 CASC2Q6XLA1 102 aa8.11□□□□□ -1.11
RBM39-216ENST00000444878 KRTAP29-1A8MX34 341 aaPredicted RBP8.1□□□□□ -1.11
RBM39-216ENST00000444878 LCE6AA0A183 80 aa8.09□□□□□ -1.11
RBM39-216ENST00000444878 MP68P56378 58 aa8.09□□□□□ -1.11
RBM39-216ENST00000444878 SSBP3-AS1Q7Z2R9 100 aa8.08□□□□□ -1.12
RBM39-216ENST00000444878 PKHD1P08F94 4074 aa8.07□□□□□ -1.12
RBM39-216ENST00000444878 A8MUN3 132 aa8.07□□□□□ -1.12
RBM39-216ENST00000444878 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
RBM39-216ENST00000444878 MMP24-AS1A0A0U1RRL7 71 aa8.05□□□□□ -1.12
RBM39-216ENST00000444878 A0A087X002 238 aa8.04□□□□□ -1.12
RBM39-216ENST00000444878 hDV103S1A0JD37 113 aa8.03□□□□□ -1.12
RBM39-216ENST00000444878 PSPHP1O15172 72 aa8.02□□□□□ -1.13
RBM39-216ENST00000444878 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
RBM39-216ENST00000444878 IGHV6-1A0A0B4J1U7 121 aa8.02□□□□□ -1.13
RBM39-216ENST00000444878 A0A1B0GVX0 72 aa8.02□□□□□ -1.13
RBM39-216ENST00000444878 LINC00313P59037 77 aa8.02□□□□□ -1.13
RBM39-216ENST00000444878 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
RBM39-216ENST00000444878 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
RBM39-216ENST00000444878 SPINK6Q6UWN8 80 aa8□□□□□ -1.13
RBM39-216ENST00000444878 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
RBM39-216ENST00000444878 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
RBM39-216ENST00000444878 ATP5EP56381 51 aaPredicted RBP7.99□□□□□ -1.13
RBM39-216ENST00000444878 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
RBM39-216ENST00000444878 DYNC1H1Q14204 4646 aaKnown RBP7.97□□□□□ -1.13
RBM39-216ENST00000444878 ASB16-AS1Q495Z4 193 aa7.97□□□□□ -1.13
RBM39-216ENST00000444878 A0A1B0GVY2 172 aa7.96□□□□□ -1.13
RBM39-216ENST00000444878 H0Y9P7 68 aa7.96□□□□□ -1.13
RBM39-216ENST00000444878 LINC00208Q96KT6 92 aa7.95□□□□□ -1.14
RBM39-216ENST00000444878 LCA10Q71F78 164 aa7.94□□□□□ -1.14
RBM39-216ENST00000444878 NOTCH2NLQ7Z3S9 236 aa7.93□□□□□ -1.14
RBM39-216ENST00000444878 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
RBM39-216ENST00000444878 H3BPC8 53 aa7.93□□□□□ -1.14
RBM39-216ENST00000444878 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
RBM39-216ENST00000444878 TRAV22A0A0B4J277 110 aa7.92□□□□□ -1.14
RBM39-216ENST00000444878 SMR3BP02814 79 aaPredicted RBP7.91□□□□□ -1.14
RBM39-216ENST00000444878 RYR2Q92736 4967 aa7.91□□□□□ -1.14
RBM39-216ENST00000444878 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
RBM39-216ENST00000444878 KMT2CQ8NEZ4 4911 aaKnown RBP7.9□□□□□ -1.15
RBM39-216ENST00000444878 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
RBM39-216ENST00000444878 C1orf64Q8NEQ6 169 aa7.88□□□□□ -1.15
RBM39-216ENST00000444878 APOBP04114 4563 aaKnown RBP7.88□□□□□ -1.15
RBM39-216ENST00000444878 FAT1Q14517 4588 aa7.85□□□□□ -1.15
RBM39-216ENST00000444878 SPINK1P00995 79 aa7.84□□□□□ -1.16
RBM39-216ENST00000444878 PRR4Q16378 134 aa7.82□□□□□ -1.16
RBM39-216ENST00000444878 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
RBM39-216ENST00000444878 LINC00304Q8N9R0 145 aa7.79□□□□□ -1.16
RBM39-216ENST00000444878 SPANXA2-OT1Q8N9U9 137 aa7.79□□□□□ -1.16
RBM39-216ENST00000444878 KRTAP10-4P60372 401 aaPredicted RBP7.78□□□□□ -1.16
RBM39-216ENST00000444878 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
RBM39-216ENST00000444878 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
RBM39-216ENST00000444878 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
RBM39-216ENST00000444878 SPAG11AQ6PDA7 123 aa7.76□□□□□ -1.17
RBM39-216ENST00000444878 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
RBM39-216ENST00000444878 Q5W150 140 aa7.75□□□□□ -1.17
RBM39-216ENST00000444878 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
RBM39-216ENST00000444878 Q8N9P0 234 aaPredicted RBP7.73□□□□□ -1.17
RBM39-216ENST00000444878 LOC101927531A0A1B0GV80 90 aa7.72□□□□□ -1.17
RBM39-216ENST00000444878 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
RBM39-216ENST00000444878 IGLV7-46A0A075B6I9 117 aa7.71□□□□□ -1.18
RBM39-216ENST00000444878 KRTAP16-1A8MUX0 517 aa7.7□□□□□ -1.18
RBM39-216ENST00000444878 C7orf65Q6ZTY9 151 aa7.7□□□□□ -1.18
RBM39-216ENST00000444878 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
RBM39-216ENST00000444878 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
RBM39-216ENST00000444878 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
RBM39-216ENST00000444878 Q1T7F1 81 aa7.67□□□□□ -1.18
RBM39-216ENST00000444878 RETNLBQ9BQ08 111 aa7.67□□□□□ -1.18
RBM39-216ENST00000444878 RYR3Q15413 4870 aa7.66□□□□□ -1.18
RBM39-216ENST00000444878 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
RBM39-216ENST00000444878 HSPG2P98160 4391 aa7.61□□□□□ -1.19
RBM39-216ENST00000444878 Q5VSD8 79 aa7.6□□□□□ -1.19
RBM39-216ENST00000444878 COA5Q86WW8 74 aa7.6□□□□□ -1.19
RBM39-216ENST00000444878 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
RBM39-216ENST00000444878 FLG2Q5D862 2391 aaPredicted RBP7.57□□□□□ -1.2
RBM39-216ENST00000444878 HRES1P13985 223 aa7.55□□□□□ -1.2
RBM39-216ENST00000444878 LRP1Q07954 4544 aaKnown RBP7.55□□□□□ -1.2
RBM39-216ENST00000444878 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
RBM39-216ENST00000444878 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
RBM39-216ENST00000444878 RYR1P21817 5038 aa7.53□□□□□ -1.2
RBM39-216ENST00000444878 Q8N1X5 172 aa7.52□□□□□ -1.21
RBM39-216ENST00000444878 TNXBP22105 4242 aa7.5□□□□□ -1.21
RBM39-216ENST00000444878 A6NN06 94 aa7.5□□□□□ -1.21
RBM39-216ENST00000444878 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
RBM39-216ENST00000444878 ATP11AUNQ6ZP68 121 aa7.5□□□□□ -1.21
RBM39-216ENST00000444878 ACYP2P14621 99 aa7.49□□□□□ -1.21
RBM39-216ENST00000444878 C20orf166-AS1Q96NR2 134 aa7.48□□□□□ -1.21
RBM39-216ENST00000444878 DMBT1Q9UGM3 2413 aaPredicted RBP7.47□□□□□ -1.21
RBM39-216ENST00000444878 A8MUU9 505 aa7.47□□□□□ -1.21
RBM39-216ENST00000444878 DMAC1Q96GE9 116 aa7.47□□□□□ -1.21
RBM39-216ENST00000444878 KIAA1109Q2LD37 5005 aa7.46□□□□□ -1.22
RBM39-216ENST00000444878 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.22
RBM39-216ENST00000444878 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
RBM39-216ENST00000444878 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
RBM39-216ENST00000444878 CHKB-CPT1BH3BT56 60 aa7.4□□□□□ -1.22
RBM39-216ENST00000444878 PRR15LQ9BU68 103 aa7.39□□□□□ -1.23
RBM39-216ENST00000444878 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
RBM39-216ENST00000444878 Q5VV11 94 aa7.37□□□□□ -1.23
RBM39-216ENST00000444878 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
RBM39-216ENST00000444878 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms