RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MEGF8Q7Z7M0 2845 aa6.25□□□□□ -1.41
CALD1-210ENST00000443197 CD164Q04900 197 aa6.25□□□□□ -1.41
CALD1-210ENST00000443197 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
CALD1-210ENST00000443197 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
CALD1-210ENST00000443197 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
CALD1-210ENST00000443197 COA5Q86WW8 74 aa6.22□□□□□ -1.41
CALD1-210ENST00000443197 ACYP2P14621 99 aa6.21□□□□□ -1.41
CALD1-210ENST00000443197 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
CALD1-210ENST00000443197 HUWE1Q7Z6Z7 4374 aaKnown RBP6.2□□□□□ -1.42
CALD1-210ENST00000443197 A8MUN3 132 aa6.18□□□□□ -1.42
CALD1-210ENST00000443197 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
CALD1-210ENST00000443197 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
CALD1-210ENST00000443197 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
CALD1-210ENST00000443197 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
CALD1-210ENST00000443197 Q8N1X5 172 aa6.15□□□□□ -1.42
CALD1-210ENST00000443197 Q5VSD8 79 aa6.14□□□□□ -1.43
CALD1-210ENST00000443197 OXTP01178 125 aa6.14□□□□□ -1.43
CALD1-210ENST00000443197 J3QL48 77 aa6.12□□□□□ -1.43
CALD1-210ENST00000443197 A0A1B0GU69 56 aa6.11□□□□□ -1.43
CALD1-210ENST00000443197 HRES1P13985 223 aa6.11□□□□□ -1.43
CALD1-210ENST00000443197 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
CALD1-210ENST00000443197 Q6ZSA8 131 aa6.1□□□□□ -1.43
CALD1-210ENST00000443197 Q5W150 140 aa6.09□□□□□ -1.43
CALD1-210ENST00000443197 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.43
CALD1-210ENST00000443197 IGLV7-46A0A075B6I9 117 aa6.08□□□□□ -1.44
CALD1-210ENST00000443197 FP248Q71RG6 208 aaPredicted RBP6.07□□□□□ -1.44
CALD1-210ENST00000443197 ANK2Q01484 3957 aa6.05□□□□□ -1.44
CALD1-210ENST00000443197 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
CALD1-210ENST00000443197 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
CALD1-210ENST00000443197 Q5XG85 94 aa6.03□□□□□ -1.44
CALD1-210ENST00000443197 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
CALD1-210ENST00000443197 DNHD1Q96M86 4753 aa6□□□□□ -1.45
CALD1-210ENST00000443197 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
CALD1-210ENST00000443197 SPINK7P58062 85 aa5.98□□□□□ -1.45
CALD1-210ENST00000443197 DNAH10Q8IVF4 4471 aa5.97□□□□□ -1.45
CALD1-210ENST00000443197 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
CALD1-210ENST00000443197 K7ERS5 55 aa5.94□□□□□ -1.46
CALD1-210ENST00000443197 Q1T7F1 81 aa5.94□□□□□ -1.46
CALD1-210ENST00000443197 PRKDCP78527 4128 aaKnown RBP5.92□□□□□ -1.46
CALD1-210ENST00000443197 UQCR11O14957 56 aa5.89□□□□□ -1.47
CALD1-210ENST00000443197 STARD9Q9P2P6 4700 aa5.87□□□□□ -1.47
CALD1-210ENST00000443197 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
CALD1-210ENST00000443197 DMAC1Q96GE9 116 aa5.86□□□□□ -1.47
CALD1-210ENST00000443197 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
CALD1-210ENST00000443197 Q5VV11 94 aa5.85□□□□□ -1.47
CALD1-210ENST00000443197 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
CALD1-210ENST00000443197 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
CALD1-210ENST00000443197 LYSTQ99698 3801 aa5.84□□□□□ -1.47
CALD1-210ENST00000443197 LINC01558Q9Y6Z2 57 aa5.84□□□□□ -1.48
CALD1-210ENST00000443197 RBM12B-AS1Q9P1G2 102 aa5.83□□□□□ -1.48
CALD1-210ENST00000443197 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
CALD1-210ENST00000443197 DNAH1Q9P2D7 4330 aa5.82□□□□□ -1.48
CALD1-210ENST00000443197 A0A0D9SG42 100 aa5.79□□□□□ -1.48
CALD1-210ENST00000443197 Q75L30 129 aa5.79□□□□□ -1.48
CALD1-210ENST00000443197 DNAH11Q96DT5 4516 aa5.78□□□□□ -1.48
CALD1-210ENST00000443197 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
CALD1-210ENST00000443197 KMT2AQ03164 3969 aa5.77□□□□□ -1.49
CALD1-210ENST00000443197 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
CALD1-210ENST00000443197 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
CALD1-210ENST00000443197 DNAH3Q8TD57 4116 aa5.74□□□□□ -1.49
CALD1-210ENST00000443197 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
CALD1-210ENST00000443197 A0A1B0GU33 70 aa5.74□□□□□ -1.49
CALD1-210ENST00000443197 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
CALD1-210ENST00000443197 A8MU10 97 aa5.73□□□□□ -1.49
CALD1-210ENST00000443197 A8MUU9 505 aa5.73□□□□□ -1.49
CALD1-210ENST00000443197 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.49
CALD1-210ENST00000443197 S4R3F8 94 aa5.71□□□□□ -1.5
CALD1-210ENST00000443197 DNAH7Q8WXX0 4024 aa5.69□□□□□ -1.5
CALD1-210ENST00000443197 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
CALD1-210ENST00000443197 H3BS24 57 aa5.68□□□□□ -1.5
CALD1-210ENST00000443197 LCA10Q71F78 164 aa5.67□□□□□ -1.5
CALD1-210ENST00000443197 DNAH5Q8TE73 4624 aa5.67□□□□□ -1.5
CALD1-210ENST00000443197 SEC61BP60468 96 aaKnown RBP5.67□□□□□ -1.5
CALD1-210ENST00000443197 SPINT4Q6UDR6 99 aa5.66□□□□□ -1.5
CALD1-210ENST00000443197 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
CALD1-210ENST00000443197 XP32Q5T750 250 aa5.66□□□□□ -1.5
CALD1-210ENST00000443197 CSAG1Q6PB30 78 aa5.66□□□□□ -1.5
CALD1-210ENST00000443197 KRTAP10-8P60410 259 aa5.65□□□□□ -1.51
CALD1-210ENST00000443197 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.51
CALD1-210ENST00000443197 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
CALD1-210ENST00000443197 FAT1Q14517 4588 aa5.61□□□□□ -1.51
CALD1-210ENST00000443197 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
CALD1-210ENST00000443197 DNAH17Q9UFH2 4485 aa5.59□□□□□ -1.51
CALD1-210ENST00000443197 M0R2T5 61 aa5.56□□□□□ -1.52
CALD1-210ENST00000443197 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
CALD1-210ENST00000443197 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
CALD1-210ENST00000443197 H1FX-AS1Q4G0G2 97 aa5.56□□□□□ -1.52
CALD1-210ENST00000443197 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
CALD1-210ENST00000443197 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
CALD1-210ENST00000443197 DYNC1H1Q14204 4646 aaKnown RBP5.53□□□□□ -1.52
CALD1-210ENST00000443197 CRIPTQ9P021 101 aa5.52□□□□□ -1.53
CALD1-210ENST00000443197 DNAH6Q9C0G6 4158 aa5.52□□□□□ -1.53
CALD1-210ENST00000443197 DYNC2H1Q8NCM8 4307 aaKnown RBP5.52□□□□□ -1.53
CALD1-210ENST00000443197 HYDINQ4G0P3 5121 aa5.52□□□□□ -1.53
CALD1-210ENST00000443197 R4GN34 69 aa5.51□□□□□ -1.53
CALD1-210ENST00000443197 ALMS1Q8TCU4 4167 aa5.51□□□□□ -1.53
CALD1-210ENST00000443197 FRAS1Q86XX4 4008 aa5.5□□□□□ -1.53
CALD1-210ENST00000443197 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
CALD1-210ENST00000443197 KRTAP4-5Q9BYR2 181 aa5.48□□□□□ -1.53
CALD1-210ENST00000443197 M0QZ58 72 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms