RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 COX6CP09669 75 aa6.86□□□□□ -1.31
PTPRE-203ENST00000442830 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
PTPRE-203ENST00000442830 C21orf62-AS1Q17RA5 79 aa6.86□□□□□ -1.31
PTPRE-203ENST00000442830 LINC00472Q9H8W2 130 aa6.86□□□□□ -1.31
PTPRE-203ENST00000442830 IGHV6-1A0A0B4J1U7 121 aa6.85□□□□□ -1.31
PTPRE-203ENST00000442830 CCKP06307 115 aa6.85□□□□□ -1.31
PTPRE-203ENST00000442830 C2orf91Q6ZV80 131 aa6.85□□□□□ -1.31
PTPRE-203ENST00000442830 MT1FP04733 61 aa6.83□□□□□ -1.32
PTPRE-203ENST00000442830 UBE2V1Q13404 147 aa6.83□□□□□ -1.32
PTPRE-203ENST00000442830 NOTCH2NLQ7Z3S9 236 aa6.83□□□□□ -1.32
PTPRE-203ENST00000442830 PSMB2P49721 201 aa6.82□□□□□ -1.32
PTPRE-203ENST00000442830 KRTAP9-3Q9BYQ3 159 aa6.82□□□□□ -1.32
PTPRE-203ENST00000442830 A0A1B0GVX0 72 aa6.81□□□□□ -1.32
PTPRE-203ENST00000442830 J3KT08 172 aa6.81□□□□□ -1.32
PTPRE-203ENST00000442830 FXYD2P54710 66 aa6.81□□□□□ -1.32
PTPRE-203ENST00000442830 DEFB116Q30KQ4 102 aa6.79□□□□□ -1.32
PTPRE-203ENST00000442830 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
PTPRE-203ENST00000442830 A0A1B0GV72 72 aa6.78□□□□□ -1.32
PTPRE-203ENST00000442830 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
PTPRE-203ENST00000442830 TMA7Q9Y2S6 64 aaKnown RBP6.78□□□□□ -1.32
PTPRE-203ENST00000442830 HSD52Q0P140 79 aa6.77□□□□□ -1.33
PTPRE-203ENST00000442830 DSCR8Q96T75 97 aa6.77□□□□□ -1.33
PTPRE-203ENST00000442830 RBM3P98179 157 aaKnown RBP6.76□□□□□ -1.33
PTPRE-203ENST00000442830 A8MWP4 228 aa6.75□□□□□ -1.33
PTPRE-203ENST00000442830 NDUFB1O75438 58 aa6.75□□□□□ -1.33
PTPRE-203ENST00000442830 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
PTPRE-203ENST00000442830 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
PTPRE-203ENST00000442830 SPINK7P58062 85 aa6.74□□□□□ -1.33
PTPRE-203ENST00000442830 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
PTPRE-203ENST00000442830 Q8N9P0 234 aaPredicted RBP6.71□□□□□ -1.34
PTPRE-203ENST00000442830 A0A1B0GW54 56 aa6.7□□□□□ -1.34
PTPRE-203ENST00000442830 C9JAW5 83 aa6.7□□□□□ -1.34
PTPRE-203ENST00000442830 LOC105371267A0A1B0GV96 52 aa6.69□□□□□ -1.34
PTPRE-203ENST00000442830 H3BS24 57 aa6.69□□□□□ -1.34
PTPRE-203ENST00000442830 K7ERJ3 54 aa6.69□□□□□ -1.34
PTPRE-203ENST00000442830 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
PTPRE-203ENST00000442830 KRTAP19-6Q3LI70 58 aa6.68□□□□□ -1.34
PTPRE-203ENST00000442830 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
PTPRE-203ENST00000442830 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
PTPRE-203ENST00000442830 Q6ZQT0 140 aa6.67□□□□□ -1.34
PTPRE-203ENST00000442830 WFDC13Q8IUB5 93 aa6.66□□□□□ -1.34
PTPRE-203ENST00000442830 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
PTPRE-203ENST00000442830 JMJD7-PLA2G4BH0Y9G9 81 aa6.64□□□□□ -1.35
PTPRE-203ENST00000442830 BAALC-AS2P0C853 105 aa6.64□□□□□ -1.35
PTPRE-203ENST00000442830 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
PTPRE-203ENST00000442830 C8orf17Q9NRJ1 99 aa6.64□□□□□ -1.35
PTPRE-203ENST00000442830 PDE6GP18545 87 aa6.63□□□□□ -1.35
PTPRE-203ENST00000442830 UQCR10Q9UDW1 63 aa6.63□□□□□ -1.35
PTPRE-203ENST00000442830 Q6ZVQ6 151 aa6.6□□□□□ -1.35
PTPRE-203ENST00000442830 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
PTPRE-203ENST00000442830 LOC110117498A0A087WWA1 95 aa6.59□□□□□ -1.35
PTPRE-203ENST00000442830 IGKV3D-7A0A0C4DH55 119 aa6.59□□□□□ -1.35
PTPRE-203ENST00000442830 PYY3Q5JQD4 70 aa6.59□□□□□ -1.35
PTPRE-203ENST00000442830 ATXN8Q156A1 80 aa6.57□□□□□ -1.36
PTPRE-203ENST00000442830 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
PTPRE-203ENST00000442830 H1FX-AS1Q4G0G2 97 aa6.56□□□□□ -1.36
PTPRE-203ENST00000442830 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
PTPRE-203ENST00000442830 KRTAP4-9Q9BYQ8 210 aa6.56□□□□□ -1.36
PTPRE-203ENST00000442830 TMEM254Q8TBM7 123 aa6.55□□□□□ -1.36
PTPRE-203ENST00000442830 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
PTPRE-203ENST00000442830 NREPQ16612 68 aa6.52□□□□□ -1.37
PTPRE-203ENST00000442830 KRTAP6-3Q3LI67 103 aa6.51□□□□□ -1.37
PTPRE-203ENST00000442830 MMP24-AS1A0A0U1RRL7 71 aa6.49□□□□□ -1.37
PTPRE-203ENST00000442830 hDV103S1A0JD37 113 aa6.49□□□□□ -1.37
PTPRE-203ENST00000442830 M0R143 59 aa6.49□□□□□ -1.37
PTPRE-203ENST00000442830 NDUFS5O43920 106 aa6.48□□□□□ -1.37
PTPRE-203ENST00000442830 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
PTPRE-203ENST00000442830 C14orf132Q9NPU4 83 aa6.47□□□□□ -1.37
PTPRE-203ENST00000442830 TSTD3H0UI37 97 aa6.44□□□□□ -1.38
PTPRE-203ENST00000442830 IGKV2D-30A0A075B6S6 120 aa6.42□□□□□ -1.38
PTPRE-203ENST00000442830 IGKV2-30P06310 120 aa6.42□□□□□ -1.38
PTPRE-203ENST00000442830 K7EQZ3 153 aa6.41□□□□□ -1.38
PTPRE-203ENST00000442830 KRTAP4-2Q9BYR5 136 aa6.39□□□□□ -1.39
PTPRE-203ENST00000442830 BPY2O14599 106 aa6.38□□□□□ -1.39
PTPRE-203ENST00000442830 NAA38Q9BRA0 125 aaKnown RBP6.37□□□□□ -1.39
PTPRE-203ENST00000442830 H3BT86 120 aa6.35□□□□□ -1.39
PTPRE-203ENST00000442830 FAM236AA0A1B0GUQ0 79 aa6.34□□□□□ -1.39
PTPRE-203ENST00000442830 FAM236BA0A1B0GV22 79 aa6.34□□□□□ -1.39
PTPRE-203ENST00000442830 CXCL6P80162 114 aa6.34□□□□□ -1.39
PTPRE-203ENST00000442830 Q5W150 140 aa6.33□□□□□ -1.4
PTPRE-203ENST00000442830 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
PTPRE-203ENST00000442830 KRTAP4-11Q9BYQ6 195 aa6.33□□□□□ -1.4
PTPRE-203ENST00000442830 A6NN06 94 aa6.32□□□□□ -1.4
PTPRE-203ENST00000442830 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
PTPRE-203ENST00000442830 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
PTPRE-203ENST00000442830 Q5VV11 94 aa6.3□□□□□ -1.4
PTPRE-203ENST00000442830 PCP4L1A6NKN8 68 aa6.28□□□□□ -1.4
PTPRE-203ENST00000442830 C5orf47Q569G3 176 aa6.28□□□□□ -1.4
PTPRE-203ENST00000442830 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
PTPRE-203ENST00000442830 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
PTPRE-203ENST00000442830 S4R3F8 94 aa6.27□□□□□ -1.41
PTPRE-203ENST00000442830 BATFQ16520 125 aa6.24□□□□□ -1.41
PTPRE-203ENST00000442830 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
PTPRE-203ENST00000442830 NEBP20929 6669 aa6.23□□□□□ -1.41
PTPRE-203ENST00000442830 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
PTPRE-203ENST00000442830 C9orf118A6NHY6 69 aa6.22□□□□□ -1.41
PTPRE-203ENST00000442830 Q8N9L7 120 aa6.22□□□□□ -1.41
PTPRE-203ENST00000442830 MT1BP07438 61 aa6.21□□□□□ -1.42
PTPRE-203ENST00000442830 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
PTPRE-203ENST00000442830 UBL5Q9BZL1 73 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms