RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 NESP48681 1621 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 NRXN3Q9Y4C0 1643 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 DNMBPQ6XZF7 1577 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 NEXMIFQ5QGS0 1516 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 EFCAB6Q5THR3 1501 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 PZPP20742 1482 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 VPS8Q8N3P4 1428 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 ABCA13Q86UQ4 5058 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 GOLGA4Q13439 2230 aaKnown RBP-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 ATMQ13315 3056 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 NBPF19A0A087WUL8 3843 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 H3BUT2 72 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 SMIM13P0DJ93 91 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 CRIP1P50238 77 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 PPP3R1P63098 170 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 SELENOWP63302 87 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 LINC00308Q8TCZ7 52 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 Q9H521 79 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 MYCBP2O75592 4640 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 CENPEQ02224 2701 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 MYH4Q9Y623 1939 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 VPS13BQ7Z7G8 4022 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 CEP290O15078 2479 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 LYSTQ99698 3801 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 TJP1Q07157 1748 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 ADGRG4Q8IZF6 3080 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 WIZO95785 1651 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 LMO7Q8WWI1 1683 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 FAM208AQ9UK61 1670 aaKnown RBP-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 ALMS1Q8TCU4 4167 aa-0.27□□□□□ -2.45
PFDN4-202ENST00000441080 SAMD9Q5K651 1589 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 PEG3Q9GZU2 1588 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ABCC1P33527 1531 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ABCC2Q92887 1545 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 CFTRP13569 1480 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 RAPGEF2Q9Y4G8 1499 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 EEA1Q15075 1411 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 DMXL2Q8TDJ6 3036 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 TRANK1O15050 2925 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 MUC17Q685J3 4493 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 DEFB131BA0A096LNP1 70 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 A0A096LPF7 62 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 MYMXA0A1B0GTQ4 84 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 H3BSH0 61 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 K7EMI3 77 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 M0R1W7 72 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 MPC2O95563 127 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 HMGN2P05204 90 aaKnown RBP-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 TFF3Q07654 80 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 HMGN3Q15651 99 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ATXN8Q156A1 80 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 LINC00470Q9BZP3 86 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 TMEM167BQ9NRX6 74 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 GNG8Q9UK08 70 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 DNHD1Q96M86 4753 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ITSN1Q15811 1721 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 CROCC2H7BZ55 1655 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ZC3H13Q5T200 1668 aaKnown RBP-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 QRICH2Q9H0J4 1663 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 BOD1L1Q8NFC6 3051 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 RNF17Q9BXT8 1623 aaKnown RBP-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 CC2D2AQ9P2K1 1620 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 THOC2Q8NI27 1593 aaKnown RBP-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 LRBAP50851 2863 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ZFHX3Q15911 3703 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 NFAT5O94916 1531 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 ABCC6O95255 1503 aa-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 RANBP2P49792 3224 aaKnown RBP-0.28□□□□□ -2.45
PFDN4-202ENST00000441080 FANCAO15360 1455 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 FAT2Q9NYQ8 4349 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 FAT3Q8TDW7 4589 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 LTN1O94822 1766 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 DNAH3Q8TD57 4116 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 C3P01024 1663 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 MYOM1P52179 1685 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 CLTCQ00610 1675 aaKnown RBP-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 SHPRHQ149N8 1683 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 CEP350Q5VT06 3117 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 KANTRA0A1W2PQU2 76 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 HMGN1P05114 100 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 DEFB131AP59861 70 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 MROH1Q8NDA8 1641 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 BPTFQ12830 3046 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 PKHD1P08F94 4074 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 ARHGAP5Q13017 1502 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 URB2Q14146 1524 aaKnown RBP-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 PKHD1L1Q86WI1 4243 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 MYOM2P54296 1465 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 PRUNE2Q8WUY3 3088 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 AKAP12Q02952 1782 aa-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 SMG1Q96Q15 3661 aaKnown RBP-0.29□□□□□ -2.46
PFDN4-202ENST00000441080 CEP162Q5TB80 1403 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 DDX60Q8IY21 1712 aaKnown RBP-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 MYO5CQ9NQX4 1742 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 ZFHX4Q86UP3 3567 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 CSMD1Q96PZ7 3565 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 CFAP43Q8NDM7 1665 aa-0.3□□□□□ -2.46
PFDN4-202ENST00000441080 MADDQ8WXG6 1647 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 257.5 ms