RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 Q5XG85 94 aa6.79□□□□□ -1.32
AC009404.1-202ENST00000439955 KRTAP4-8A0A0G2JLE6 195 aa6.78□□□□□ -1.32
AC009404.1-202ENST00000439955 NREPQ16612 68 aa6.78□□□□□ -1.32
AC009404.1-202ENST00000439955 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
AC009404.1-202ENST00000439955 LINC00304Q8N9R0 145 aa6.78□□□□□ -1.32
AC009404.1-202ENST00000439955 SPINK1P00995 79 aa6.77□□□□□ -1.33
AC009404.1-202ENST00000439955 ASB16-AS1Q495Z4 193 aa6.77□□□□□ -1.33
AC009404.1-202ENST00000439955 HRCT1Q6UXD1 115 aa6.77□□□□□ -1.33
AC009404.1-202ENST00000439955 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
AC009404.1-202ENST00000439955 LIMD2Q9BT23 127 aa6.77□□□□□ -1.33
AC009404.1-202ENST00000439955 H3BS24 57 aa6.75□□□□□ -1.33
AC009404.1-202ENST00000439955 A0A0U1RQV1 116 aa6.74□□□□□ -1.33
AC009404.1-202ENST00000439955 CXCL6P80162 114 aa6.74□□□□□ -1.33
AC009404.1-202ENST00000439955 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
AC009404.1-202ENST00000439955 J3KT08 172 aa6.72□□□□□ -1.33
AC009404.1-202ENST00000439955 BPY2O14599 106 aa6.71□□□□□ -1.34
AC009404.1-202ENST00000439955 Q96NJ1 140 aa6.71□□□□□ -1.34
AC009404.1-202ENST00000439955 SIGMAR1Q99720 223 aa6.71□□□□□ -1.34
AC009404.1-202ENST00000439955 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
AC009404.1-202ENST00000439955 IMUPQ9GZP8 106 aa6.69□□□□□ -1.34
AC009404.1-202ENST00000439955 IGKV3D-7A0A0C4DH55 119 aa6.68□□□□□ -1.34
AC009404.1-202ENST00000439955 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
AC009404.1-202ENST00000439955 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
AC009404.1-202ENST00000439955 A8MWP4 228 aa6.65□□□□□ -1.34
AC009404.1-202ENST00000439955 IGKV4-1P06312 121 aa6.65□□□□□ -1.34
AC009404.1-202ENST00000439955 DSCR10P59022 87 aa6.65□□□□□ -1.34
AC009404.1-202ENST00000439955 PRR4Q16378 134 aa6.65□□□□□ -1.34
AC009404.1-202ENST00000439955 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
AC009404.1-202ENST00000439955 NDUFB1O75438 58 aa6.63□□□□□ -1.35
AC009404.1-202ENST00000439955 PRR15Q8IV56 129 aa6.62□□□□□ -1.35
AC009404.1-202ENST00000439955 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
AC009404.1-202ENST00000439955 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
AC009404.1-202ENST00000439955 K7EQZ3 153 aa6.6□□□□□ -1.35
AC009404.1-202ENST00000439955 Q8N9L7 120 aa6.59□□□□□ -1.35
AC009404.1-202ENST00000439955 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
AC009404.1-202ENST00000439955 CRCT1Q9UGL9 99 aa6.57□□□□□ -1.36
AC009404.1-202ENST00000439955 A0A087WVE0 104 aa6.56□□□□□ -1.36
AC009404.1-202ENST00000439955 C8orf87E5RJ46 101 aa6.56□□□□□ -1.36
AC009404.1-202ENST00000439955 FP248Q71RG6 208 aaPredicted RBP6.56□□□□□ -1.36
AC009404.1-202ENST00000439955 SCGB1A1P11684 91 aa6.55□□□□□ -1.36
AC009404.1-202ENST00000439955 IGHV6-1A0A0B4J1U7 121 aa6.54□□□□□ -1.36
AC009404.1-202ENST00000439955 HCG22E2RYF7 251 aa6.54□□□□□ -1.36
AC009404.1-202ENST00000439955 C8orf17Q9NRJ1 99 aa6.54□□□□□ -1.36
AC009404.1-202ENST00000439955 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
AC009404.1-202ENST00000439955 RETNLBQ9BQ08 111 aa6.52□□□□□ -1.37
AC009404.1-202ENST00000439955 FAM236AA0A1B0GUQ0 79 aa6.51□□□□□ -1.37
AC009404.1-202ENST00000439955 FAM236BA0A1B0GV22 79 aa6.51□□□□□ -1.37
AC009404.1-202ENST00000439955 CASC2Q6XLA1 102 aa6.5□□□□□ -1.37
AC009404.1-202ENST00000439955 hDV103S1A0JD37 113 aa6.49□□□□□ -1.37
AC009404.1-202ENST00000439955 LINC00313P59037 77 aa6.49□□□□□ -1.37
AC009404.1-202ENST00000439955 KRTAP19-1Q8IUB9 90 aa6.49□□□□□ -1.37
AC009404.1-202ENST00000439955 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
AC009404.1-202ENST00000439955 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
AC009404.1-202ENST00000439955 WFDC13Q8IUB5 93 aa6.48□□□□□ -1.37
AC009404.1-202ENST00000439955 ATOX1O00244 68 aa6.47□□□□□ -1.37
AC009404.1-202ENST00000439955 IGLV7-46A0A075B6I9 117 aa6.46□□□□□ -1.38
AC009404.1-202ENST00000439955 MRPL34Q9BQ48 92 aaKnown RBP6.46□□□□□ -1.38
AC009404.1-202ENST00000439955 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
AC009404.1-202ENST00000439955 SMIM20Q8N5G0 67 aa6.45□□□□□ -1.38
AC009404.1-202ENST00000439955 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
AC009404.1-202ENST00000439955 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
AC009404.1-202ENST00000439955 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
AC009404.1-202ENST00000439955 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
AC009404.1-202ENST00000439955 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
AC009404.1-202ENST00000439955 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
AC009404.1-202ENST00000439955 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
AC009404.1-202ENST00000439955 TRAV7A0A075B6U4 112 aa6.39□□□□□ -1.39
AC009404.1-202ENST00000439955 C9orf92A6NGG3 77 aa6.39□□□□□ -1.39
AC009404.1-202ENST00000439955 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
AC009404.1-202ENST00000439955 UQCRQO14949 82 aa6.38□□□□□ -1.39
AC009404.1-202ENST00000439955 A8MUU9 505 aa6.37□□□□□ -1.39
AC009404.1-202ENST00000439955 NDUFS5O43920 106 aa6.37□□□□□ -1.39
AC009404.1-202ENST00000439955 SERP2Q8N6R1 65 aa6.37□□□□□ -1.39
AC009404.1-202ENST00000439955 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
AC009404.1-202ENST00000439955 Q75L30 129 aa6.35□□□□□ -1.39
AC009404.1-202ENST00000439955 COX7CP15954 63 aa6.33□□□□□ -1.4
AC009404.1-202ENST00000439955 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
AC009404.1-202ENST00000439955 TRAV22A0A0B4J277 110 aa6.32□□□□□ -1.4
AC009404.1-202ENST00000439955 C5orf47Q569G3 176 aa6.32□□□□□ -1.4
AC009404.1-202ENST00000439955 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
AC009404.1-202ENST00000439955 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
AC009404.1-202ENST00000439955 H3BPC8 53 aa6.29□□□□□ -1.4
AC009404.1-202ENST00000439955 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
AC009404.1-202ENST00000439955 MP68P56378 58 aa6.28□□□□□ -1.4
AC009404.1-202ENST00000439955 H0Y9P7 68 aa6.27□□□□□ -1.41
AC009404.1-202ENST00000439955 PCP4P48539 62 aa6.26□□□□□ -1.41
AC009404.1-202ENST00000439955 Q5W150 140 aa6.26□□□□□ -1.41
AC009404.1-202ENST00000439955 KRTAP4-1Q9BYQ7 146 aa6.26□□□□□ -1.41
AC009404.1-202ENST00000439955 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
AC009404.1-202ENST00000439955 KLKP1Q107X0 134 aa6.23□□□□□ -1.41
AC009404.1-202ENST00000439955 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
AC009404.1-202ENST00000439955 LOC101927531A0A1B0GV80 90 aa6.22□□□□□ -1.41
AC009404.1-202ENST00000439955 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
AC009404.1-202ENST00000439955 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
AC009404.1-202ENST00000439955 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
AC009404.1-202ENST00000439955 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
AC009404.1-202ENST00000439955 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
AC009404.1-202ENST00000439955 NDUFC1O43677 76 aa6.18□□□□□ -1.42
AC009404.1-202ENST00000439955 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
AC009404.1-202ENST00000439955 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms