RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 NSD1Q96L73 2696 aaPredicted RBP5.86□□□□□ -1.47
SHPRH-206ENST00000438092 UTP20O75691 2785 aaKnown RBP5.85□□□□□ -1.47
SHPRH-206ENST00000438092 ADGRG4Q8IZF6 3080 aa5.84□□□□□ -1.47
SHPRH-206ENST00000438092 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
SHPRH-206ENST00000438092 KRTAP29-1A8MX34 341 aaPredicted RBP5.83□□□□□ -1.48
SHPRH-206ENST00000438092 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
SHPRH-206ENST00000438092 HIVEP1P15822 2718 aa5.82□□□□□ -1.48
SHPRH-206ENST00000438092 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
SHPRH-206ENST00000438092 ITPR1Q14643 2758 aa5.8□□□□□ -1.48
SHPRH-206ENST00000438092 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
SHPRH-206ENST00000438092 MYO15AQ9UKN7 3530 aa5.79□□□□□ -1.48
SHPRH-206ENST00000438092 KMT2BQ9UMN6 2715 aaPredicted RBP5.79□□□□□ -1.48
SHPRH-206ENST00000438092 NBEAQ8NFP9 2946 aa5.78□□□□□ -1.48
SHPRH-206ENST00000438092 ZZEF1O43149 2961 aa5.75□□□□□ -1.49
SHPRH-206ENST00000438092 ASPMQ8IZT6 3477 aa5.74□□□□□ -1.49
SHPRH-206ENST00000438092 WDFY3Q8IZQ1 3526 aa5.73□□□□□ -1.49
SHPRH-206ENST00000438092 CELSR2Q9HCU4 2923 aa5.71□□□□□ -1.5
SHPRH-206ENST00000438092 ASB16-AS1Q495Z4 193 aa5.7□□□□□ -1.5
SHPRH-206ENST00000438092 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
SHPRH-206ENST00000438092 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
SHPRH-206ENST00000438092 KRTAP10-8P60410 259 aa5.67□□□□□ -1.5
SHPRH-206ENST00000438092 DMXL1Q9Y485 3027 aa5.65□□□□□ -1.5
SHPRH-206ENST00000438092 TNP1P09430 55 aa5.65□□□□□ -1.5
SHPRH-206ENST00000438092 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
SHPRH-206ENST00000438092 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.51
SHPRH-206ENST00000438092 LOC400499M0QZD8 3231 aa5.64□□□□□ -1.51
SHPRH-206ENST00000438092 FLNCQ14315 2725 aa5.61□□□□□ -1.51
SHPRH-206ENST00000438092 TNRC18O15417 2968 aaPredicted RBP5.61□□□□□ -1.51
SHPRH-206ENST00000438092 NDUFAF8A1L188 74 aa5.59□□□□□ -1.51
SHPRH-206ENST00000438092 TENM4Q6N022 2769 aa5.59□□□□□ -1.51
SHPRH-206ENST00000438092 DCHS2Q6V1P9 2916 aa5.59□□□□□ -1.51
SHPRH-206ENST00000438092 DCHS1Q96JQ0 3298 aa5.58□□□□□ -1.52
SHPRH-206ENST00000438092 KRTAP16-1A8MUX0 517 aa5.58□□□□□ -1.52
SHPRH-206ENST00000438092 NBPF19A0A087WUL8 3843 aa5.56□□□□□ -1.52
SHPRH-206ENST00000438092 XP32Q5T750 250 aa5.55□□□□□ -1.52
SHPRH-206ENST00000438092 KRTAP10-10P60014 251 aa5.54□□□□□ -1.52
SHPRH-206ENST00000438092 A6NN06 94 aa5.54□□□□□ -1.52
SHPRH-206ENST00000438092 TENM1Q9UKZ4 2725 aa5.52□□□□□ -1.53
SHPRH-206ENST00000438092 KRTAP21-3Q3LHN1 58 aa5.5□□□□□ -1.53
SHPRH-206ENST00000438092 RELNP78509 3460 aa5.5□□□□□ -1.53
SHPRH-206ENST00000438092 CELSR1Q9NYQ6 3014 aa5.5□□□□□ -1.53
SHPRH-206ENST00000438092 LAMA5O15230 3695 aa5.48□□□□□ -1.53
SHPRH-206ENST00000438092 FBN2P35556 2912 aa5.47□□□□□ -1.53
SHPRH-206ENST00000438092 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.53
SHPRH-206ENST00000438092 ZANQ9Y493 2812 aa5.46□□□□□ -1.54
SHPRH-206ENST00000438092 ZFHX4Q86UP3 3567 aa5.45□□□□□ -1.54
SHPRH-206ENST00000438092 CSMD1Q96PZ7 3565 aa5.44□□□□□ -1.54
SHPRH-206ENST00000438092 NF1P21359 2839 aa5.43□□□□□ -1.54
SHPRH-206ENST00000438092 NIPBLQ6KC79 2804 aaeCLIP5.4□□□□□ -1.54
SHPRH-206ENST00000438092 TENM2Q9NT68 2774 aa5.4□□□□□ -1.55
SHPRH-206ENST00000438092 HRNRQ86YZ3 2850 aaPredicted RBP5.37□□□□□ -1.55
SHPRH-206ENST00000438092 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
SHPRH-206ENST00000438092 PKD1L1Q8TDX9 2849 aa5.36□□□□□ -1.55
SHPRH-206ENST00000438092 H0YAA0 97 aa5.35□□□□□ -1.55
SHPRH-206ENST00000438092 P0C880 135 aa5.33□□□□□ -1.56
SHPRH-206ENST00000438092 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
SHPRH-206ENST00000438092 VWFP04275 2813 aa5.32□□□□□ -1.56
SHPRH-206ENST00000438092 KRTAP13-3Q3SY46 172 aa5.3□□□□□ -1.56
SHPRH-206ENST00000438092 TENM3Q9P273 2699 aa5.3□□□□□ -1.56
SHPRH-206ENST00000438092 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
SHPRH-206ENST00000438092 ZFHX3Q15911 3703 aa5.27□□□□□ -1.57
SHPRH-206ENST00000438092 TGP01266 2768 aa5.25□□□□□ -1.57
SHPRH-206ENST00000438092 DMDP11532 3685 aa5.24□□□□□ -1.57
SHPRH-206ENST00000438092 CUBNO60494 3623 aa5.21□□□□□ -1.58
SHPRH-206ENST00000438092 SMG1Q96Q15 3661 aaKnown RBP5.21□□□□□ -1.58
SHPRH-206ENST00000438092 SPENQ96T58 3664 aaKnown RBP5.2□□□□□ -1.58
SHPRH-206ENST00000438092 PDZD2O15018 2839 aa5.2□□□□□ -1.58
SHPRH-206ENST00000438092 MXRA5Q9NR99 2828 aa5.2□□□□□ -1.58
SHPRH-206ENST00000438092 SVEP1Q4LDE5 3571 aa5.17□□□□□ -1.58
SHPRH-206ENST00000438092 KRTAP12-2P59991 146 aa5.12□□□□□ -1.59
SHPRH-206ENST00000438092 CSMD2Q7Z408 3487 aa5.1□□□□□ -1.59
SHPRH-206ENST00000438092 MUC3AQ02505 3323 aa5□□□□□ -1.61
SHPRH-206ENST00000438092 FBN1P35555 2871 aaKnown RBP4.99□□□□□ -1.61
SHPRH-206ENST00000438092 SRRM2Q9UQ35 2752 aaKnown RBP4.98□□□□□ -1.61
SHPRH-206ENST00000438092 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
SHPRH-206ENST00000438092 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
SHPRH-206ENST00000438092 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
SHPRH-206ENST00000438092 TRRAPQ9Y4A5 3859 aa4.94□□□□□ -1.62
SHPRH-206ENST00000438092 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
SHPRH-206ENST00000438092 COL7A1Q02388 2944 aa4.91□□□□□ -1.62
SHPRH-206ENST00000438092 ANK3Q12955 4377 aaKnown RBP4.89□□□□□ -1.63
SHPRH-206ENST00000438092 FBN3Q75N90 2809 aa4.88□□□□□ -1.63
SHPRH-206ENST00000438092 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
SHPRH-206ENST00000438092 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
SHPRH-206ENST00000438092 VPS13CQ709C8 3753 aa4.85□□□□□ -1.63
SHPRH-206ENST00000438092 BSNQ9UPA5 3926 aa4.81□□□□□ -1.64
SHPRH-206ENST00000438092 CSMD3Q7Z407 3707 aa4.8□□□□□ -1.64
SHPRH-206ENST00000438092 KRTAP4-5Q9BYR2 181 aa4.78□□□□□ -1.64
SHPRH-206ENST00000438092 OTOGQ6ZRI0 2925 aa4.76□□□□□ -1.65
SHPRH-206ENST00000438092 HUWE1Q7Z6Z7 4374 aaKnown RBP4.7□□□□□ -1.66
SHPRH-206ENST00000438092 KRTAP10-6P60371 365 aaPredicted RBP4.69□□□□□ -1.66
SHPRH-206ENST00000438092 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
SHPRH-206ENST00000438092 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
SHPRH-206ENST00000438092 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
SHPRH-206ENST00000438092 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
SHPRH-206ENST00000438092 ZNF469Q96JG9 3925 aaPredicted RBP4.52□□□□□ -1.69
SHPRH-206ENST00000438092 AKAP9Q99996 3911 aa4.51□□□□□ -1.69
SHPRH-206ENST00000438092 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
SHPRH-206ENST00000438092 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
SHPRH-206ENST00000438092 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms