RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 C6orf99Q4VX62 202 aa6.85□□□□□ -1.31
SNHG3-202ENST00000437681 Q9BRP9 147 aa6.84□□□□□ -1.31
SNHG3-202ENST00000437681 H3BQ85 93 aa6.84□□□□□ -1.31
SNHG3-202ENST00000437681 HIGD2AQ9BW72 106 aa6.82□□□□□ -1.32
SNHG3-202ENST00000437681 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
SNHG3-202ENST00000437681 TRAV22A0A0B4J277 110 aa6.81□□□□□ -1.32
SNHG3-202ENST00000437681 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
SNHG3-202ENST00000437681 SPAG11AQ6PDA7 123 aa6.81□□□□□ -1.32
SNHG3-202ENST00000437681 LINC00575Q6W349 94 aa6.81□□□□□ -1.32
SNHG3-202ENST00000437681 TMEM254Q8TBM7 123 aa6.81□□□□□ -1.32
SNHG3-202ENST00000437681 MP68P56378 58 aa6.8□□□□□ -1.32
SNHG3-202ENST00000437681 SSBP3-AS1Q7Z2R9 100 aa6.8□□□□□ -1.32
SNHG3-202ENST00000437681 SRRM2Q9UQ35 2752 aaKnown RBP6.8□□□□□ -1.32
SNHG3-202ENST00000437681 RPS29P62273 56 aaKnown RBP6.8□□□□□ -1.32
SNHG3-202ENST00000437681 Q6ZQT0 140 aa6.8□□□□□ -1.32
SNHG3-202ENST00000437681 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.8□□□□□ -1.32
SNHG3-202ENST00000437681 MYCBP2O75592 4640 aa6.79□□□□□ -1.32
SNHG3-202ENST00000437681 TNXBP22105 4242 aa6.79□□□□□ -1.32
SNHG3-202ENST00000437681 NREPQ16612 68 aa6.79□□□□□ -1.32
SNHG3-202ENST00000437681 ATP11AUNQ6ZP68 121 aa6.79□□□□□ -1.32
SNHG3-202ENST00000437681 CXCL6P80162 114 aa6.77□□□□□ -1.33
SNHG3-202ENST00000437681 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
SNHG3-202ENST00000437681 ERC2-IT1O76042 136 aa6.76□□□□□ -1.33
SNHG3-202ENST00000437681 LOC110117498A0A087WWA1 95 aa6.75□□□□□ -1.33
SNHG3-202ENST00000437681 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
SNHG3-202ENST00000437681 hDV103S1A0JD37 113 aa6.75□□□□□ -1.33
SNHG3-202ENST00000437681 KRTAP13-2Q52LG2 175 aa6.75□□□□□ -1.33
SNHG3-202ENST00000437681 Q8NBF4 154 aa6.75□□□□□ -1.33
SNHG3-202ENST00000437681 A0A087X002 238 aa6.74□□□□□ -1.33
SNHG3-202ENST00000437681 BPY2O14599 106 aa6.74□□□□□ -1.33
SNHG3-202ENST00000437681 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
SNHG3-202ENST00000437681 Q5VV11 94 aa6.73□□□□□ -1.33
SNHG3-202ENST00000437681 LINC00304Q8N9R0 145 aa6.72□□□□□ -1.33
SNHG3-202ENST00000437681 SPINK1P00995 79 aa6.71□□□□□ -1.34
SNHG3-202ENST00000437681 PRAC1Q96KF2 57 aa6.71□□□□□ -1.34
SNHG3-202ENST00000437681 CHKB-CPT1BH3BT56 60 aa6.7□□□□□ -1.34
SNHG3-202ENST00000437681 OCR1Q9BZK8 76 aa6.7□□□□□ -1.34
SNHG3-202ENST00000437681 ST20-AS1Q8NBB2 130 aa6.69□□□□□ -1.34
SNHG3-202ENST00000437681 SMIM29Q86T20 159 aa6.68□□□□□ -1.34
SNHG3-202ENST00000437681 Q8N377 158 aa6.68□□□□□ -1.34
SNHG3-202ENST00000437681 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
SNHG3-202ENST00000437681 C1orf64Q8NEQ6 169 aa6.67□□□□□ -1.34
SNHG3-202ENST00000437681 Q6ZQY7 126 aa6.67□□□□□ -1.34
SNHG3-202ENST00000437681 Q8N9L7 120 aa6.66□□□□□ -1.34
SNHG3-202ENST00000437681 ANAPC11Q9NYG5 84 aa6.65□□□□□ -1.34
SNHG3-202ENST00000437681 PDE6GP18545 87 aa6.64□□□□□ -1.35
SNHG3-202ENST00000437681 MOBPQ13875 183 aa6.64□□□□□ -1.35
SNHG3-202ENST00000437681 LIMD2Q9BT23 127 aa6.64□□□□□ -1.35
SNHG3-202ENST00000437681 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
SNHG3-202ENST00000437681 IGKV4-1P06312 121 aa6.63□□□□□ -1.35
SNHG3-202ENST00000437681 IGLV9-49A0A0B4J1Y8 123 aa6.62□□□□□ -1.35
SNHG3-202ENST00000437681 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
SNHG3-202ENST00000437681 DEFB105AQ8NG35 78 aa6.61□□□□□ -1.35
SNHG3-202ENST00000437681 IGHV6-1A0A0B4J1U7 121 aa6.6□□□□□ -1.35
SNHG3-202ENST00000437681 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
SNHG3-202ENST00000437681 A6NED7 52 aa6.58□□□□□ -1.36
SNHG3-202ENST00000437681 A0A1B0GW54 56 aa6.57□□□□□ -1.36
SNHG3-202ENST00000437681 Q75L30 129 aa6.57□□□□□ -1.36
SNHG3-202ENST00000437681 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
SNHG3-202ENST00000437681 ZCCHC13Q8WW36 166 aaKnown RBP6.56□□□□□ -1.36
SNHG3-202ENST00000437681 RETNLBQ9BQ08 111 aa6.56□□□□□ -1.36
SNHG3-202ENST00000437681 CDC42SE1Q9NRR8 79 aa6.56□□□□□ -1.36
SNHG3-202ENST00000437681 PRR4Q16378 134 aa6.55□□□□□ -1.36
SNHG3-202ENST00000437681 PRR15LQ9BU68 103 aa6.55□□□□□ -1.36
SNHG3-202ENST00000437681 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
SNHG3-202ENST00000437681 IGFL1Q6UW32 110 aa6.54□□□□□ -1.36
SNHG3-202ENST00000437681 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
SNHG3-202ENST00000437681 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
SNHG3-202ENST00000437681 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
SNHG3-202ENST00000437681 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
SNHG3-202ENST00000437681 HERC1Q15751 4861 aa6.46□□□□□ -1.38
SNHG3-202ENST00000437681 KRTAP13-3Q3SY46 172 aa6.43□□□□□ -1.38
SNHG3-202ENST00000437681 A0A1W2PNM2 257 aa6.42□□□□□ -1.38
SNHG3-202ENST00000437681 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
SNHG3-202ENST00000437681 NDUFB1O75438 58 aa6.4□□□□□ -1.38
SNHG3-202ENST00000437681 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.39
SNHG3-202ENST00000437681 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
SNHG3-202ENST00000437681 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
SNHG3-202ENST00000437681 DSCR10P59022 87 aa6.38□□□□□ -1.39
SNHG3-202ENST00000437681 XP32Q5T750 250 aa6.37□□□□□ -1.39
SNHG3-202ENST00000437681 K7EQZ3 153 aa6.36□□□□□ -1.39
SNHG3-202ENST00000437681 A0A087WSZ3 146 aa6.36□□□□□ -1.39
SNHG3-202ENST00000437681 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
SNHG3-202ENST00000437681 Q96NJ1 140 aa6.35□□□□□ -1.39
SNHG3-202ENST00000437681 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
SNHG3-202ENST00000437681 ROMO1P60602 79 aa6.34□□□□□ -1.39
SNHG3-202ENST00000437681 LINC00472Q9H8W2 130 aa6.34□□□□□ -1.39
SNHG3-202ENST00000437681 SPANXA2-OT1Q8N9U9 137 aa6.34□□□□□ -1.39
SNHG3-202ENST00000437681 SPINK7P58062 85 aa6.33□□□□□ -1.4
SNHG3-202ENST00000437681 SEC61BP60468 96 aaKnown RBP6.31□□□□□ -1.4
SNHG3-202ENST00000437681 DEFB116Q30KQ4 102 aa6.31□□□□□ -1.4
SNHG3-202ENST00000437681 COA5Q86WW8 74 aa6.29□□□□□ -1.4
SNHG3-202ENST00000437681 WFDC13Q8IUB5 93 aa6.27□□□□□ -1.41
SNHG3-202ENST00000437681 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
SNHG3-202ENST00000437681 H0Y9P7 68 aa6.25□□□□□ -1.41
SNHG3-202ENST00000437681 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
SNHG3-202ENST00000437681 RPL37P61927 97 aaKnown RBP6.25□□□□□ -1.41
SNHG3-202ENST00000437681 NOTCH2NLQ7Z3S9 236 aa6.25□□□□□ -1.41
SNHG3-202ENST00000437681 P0C880 135 aa6.24□□□□□ -1.41
SNHG3-202ENST00000437681 C20orf166-AS1Q96NR2 134 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms