RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 Q6ZQT0 140 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 SCXQ7RTU7 201 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 DEFB108BQ8NET1 73 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 SND1-IT1Q9HBX3 110 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 CRCT1Q9UGL9 99 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 DNAH2Q9P225 4427 aa1.99□□□□□ -2.09
GTF3C3-204ENST00000435252 TRAV12-3A0A0B4J271 114 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 IGKV2-29A2NJV5 120 aaPredicted RBP1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 CHKB-CPT1BH3BT56 60 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 I3L2K1 104 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 NDUFB1O75438 58 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 KLK9Q2XQG4 91 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 RPL39P5Q59GN2 51 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 FAM74A4Q5TZK3 123 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 VPS13DQ5THJ4 4388 aa1.98□□□□□ -2.09
GTF3C3-204ENST00000435252 TRBV10-1A0A0K0K1A3 114 aa1.97□□□□□ -2.09
GTF3C3-204ENST00000435252 NCR3O14931 201 aa1.97□□□□□ -2.09
GTF3C3-204ENST00000435252 IGHV3-53P01767 116 aa1.97□□□□□ -2.09
GTF3C3-204ENST00000435252 RPL39LQ96EH5 51 aaKnown RBP1.97□□□□□ -2.09
GTF3C3-204ENST00000435252 LINC01558Q9Y6Z2 57 aa1.97□□□□□ -2.09
GTF3C3-204ENST00000435252 FSIP2Q5CZC0 6907 aa1.97□□□□□ -2.09
GTF3C3-204ENST00000435252 PKD1P98161 4303 aa1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 IGKV2-40A0A087WW87 121 aaPredicted RBP1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 IGHV3-43A0A0B4J1X8 118 aa1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 H3BPC8 53 aa1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 IGKV2D-40P01614 121 aaPredicted RBP1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 IGLV1-51P01701 117 aa1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 RPL39P62891 51 aaKnown RBP1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 SMIM11BQ8TCY0 68 aa1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 VPS13BQ7Z7G8 4022 aa1.96□□□□□ -2.1
GTF3C3-204ENST00000435252 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 IGLV10-54A0A075B6I4 117 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 TRAV21A0A0B4J279 112 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 K7ERS5 55 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 LECT2O14960 151 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 CRPP02741 224 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 CASC2Q6XLA1 102 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 Q6ZTI0 123 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 Q8N814 137 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 HIGD2AQ9BW72 106 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 XAGE1AQ9HD64 81 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 FAT1Q14517 4588 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 LRP2P98164 4655 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
GTF3C3-204ENST00000435252 IGHV3-73A0A0B4J1V6 119 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 TRBV6-4A0A1B0GX49 114 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 A6NED7 52 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 K7EIM0 57 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 M0QY20 66 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 RNASE3P12724 160 aaKnown RBP1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 HAMPP81172 84 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 ZFAND2AQ8N6M9 145 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 KCNQ1DNQ9H478 68 aa1.94□□□□□ -2.1
GTF3C3-204ENST00000435252 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 Q8TAT8 98 aa1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 LINC00208Q96KT6 92 aa1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 LINC00467Q9BRT7 94 aa1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 PRR15LQ9BU68 103 aa1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 ZNF706Q9Y5V0 76 aaPredicted RBP1.93□□□□□ -2.1
GTF3C3-204ENST00000435252 IGHV3-64A0A075B6Q5 118 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 TRGV2A0A075B6R0 118 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 ETDCA0A1B0GVM5 59 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 C10orf55Q5SWW7 151 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 Q5VSD8 79 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 CDKN2A-AS1Q9UH64 79 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 SORL1Q92673 2214 aa1.92□□□□□ -2.1
GTF3C3-204ENST00000435252 PKHD1L1Q86WI1 4243 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 IGHV3-15A0A0B4J1V0 119 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 IGHV3-21A0A0B4J1V1 117 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 A0A1W2PNM2 257 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 NUPR2A6NF83 97 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 MGPP08493 103 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 CCL18P55774 89 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 ROMO1P60602 79 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 LINC00575Q6W349 94 aa1.91□□□□□ -2.1
GTF3C3-204ENST00000435252 A0A087WSZ3 146 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 M0R2N4 97 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 NDUFA4O00483 81 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 MRPL33O75394 65 aaKnown RBP1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 COX7BP24311 80 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 LELP1Q5T871 98 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 SPATA8Q6RVD6 105 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 C9orf163Q8N9P6 203 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 Q8NAQ8 132 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 Q8NDZ9 215 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 COX7B2Q8TF08 81 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 LEAP2Q969E1 77 aa1.9□□□□□ -2.11
GTF3C3-204ENST00000435252 COX6A2Q02221 97 aa1.89□□□□□ -2.11
GTF3C3-204ENST00000435252 C1orf134Q5TEV5 83 aa1.89□□□□□ -2.11
GTF3C3-204ENST00000435252 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.89□□□□□ -2.11
GTF3C3-204ENST00000435252 WFDC10AQ9H1F0 79 aa1.89□□□□□ -2.11
GTF3C3-204ENST00000435252 H3BUX3 64 aa1.88□□□□□ -2.11
GTF3C3-204ENST00000435252 SPINK7P58062 85 aa1.88□□□□□ -2.11
GTF3C3-204ENST00000435252 SPRR4Q96PI1 79 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms