RNA–Protein interactions for RNA: ENST00000434839.2

XIST-206, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 2,865 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-206ENST00000434839 KRTAP10-9P60411 292 aa4.63□□□□□ -1.67
XIST-206ENST00000434839 USP9XQ93008 2570 aaPredicted RBP4.61□□□□□ -1.67
XIST-206ENST00000434839 FLG2Q5D862 2391 aaPredicted RBP4.6□□□□□ -1.67
XIST-206ENST00000434839 NBDYA0A0U1RRE5 68 aa4.6□□□□□ -1.67
XIST-206ENST00000434839 CUBNO60494 3623 aa4.6□□□□□ -1.67
XIST-206ENST00000434839 VPS13CQ709C8 3753 aa4.6□□□□□ -1.67
XIST-206ENST00000434839 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
XIST-206ENST00000434839 TPRXLQ17RH7 258 aa4.59□□□□□ -1.67
XIST-206ENST00000434839 FLNCQ14315 2725 aa4.59□□□□□ -1.68
XIST-206ENST00000434839 SPINK1P00995 79 aa4.58□□□□□ -1.68
XIST-206ENST00000434839 MAPK1IP1LQ8NDC0 245 aa4.58□□□□□ -1.68
XIST-206ENST00000434839 HIVEP1P15822 2718 aa4.58□□□□□ -1.68
XIST-206ENST00000434839 SONP18583 2426 aaKnown RBP4.57□□□□□ -1.68
XIST-206ENST00000434839 TEP1Q99973 2627 aaKnown RBP4.57□□□□□ -1.68
XIST-206ENST00000434839 HIVEP3Q5T1R4 2406 aa4.56□□□□□ -1.68
XIST-206ENST00000434839 ITPR2Q14571 2701 aa4.55□□□□□ -1.68
XIST-206ENST00000434839 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
XIST-206ENST00000434839 SPINK6Q6UWN8 80 aa4.55□□□□□ -1.68
XIST-206ENST00000434839 LRRK2Q5S007 2527 aa4.54□□□□□ -1.68
XIST-206ENST00000434839 C14orf177Q52M58 125 aa4.53□□□□□ -1.68
XIST-206ENST00000434839 TYMSOSQ8TAI1 123 aa4.53□□□□□ -1.68
XIST-206ENST00000434839 MTORP42345 2549 aa4.53□□□□□ -1.68
XIST-206ENST00000434839 MXRA5Q9NR99 2828 aa4.52□□□□□ -1.69
XIST-206ENST00000434839 CIRBP-AS1Q8TBR5 109 aa4.51□□□□□ -1.69
XIST-206ENST00000434839 HIVEP2P31629 2446 aa4.51□□□□□ -1.69
XIST-206ENST00000434839 ANK3Q12955 4377 aaKnown RBP4.51□□□□□ -1.69
XIST-206ENST00000434839 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
XIST-206ENST00000434839 NIPBLQ6KC79 2804 aaeCLIP4.51□□□□□ -1.69
XIST-206ENST00000434839 SRRM2Q9UQ35 2752 aaKnown RBP4.47□□□□□ -1.69
XIST-206ENST00000434839 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
XIST-206ENST00000434839 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
XIST-206ENST00000434839 FBN1P35555 2871 aaKnown RBP4.45□□□□□ -1.7
XIST-206ENST00000434839 NSD1Q96L73 2696 aaPredicted RBP4.45□□□□□ -1.7
XIST-206ENST00000434839 Q8N1X5 172 aa4.45□□□□□ -1.7
XIST-206ENST00000434839 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
XIST-206ENST00000434839 ZANQ9Y493 2812 aa4.44□□□□□ -1.7
XIST-206ENST00000434839 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
XIST-206ENST00000434839 LCE2CQ5TA81 110 aa4.44□□□□□ -1.7
XIST-206ENST00000434839 CSMD3Q7Z407 3707 aa4.42□□□□□ -1.7
XIST-206ENST00000434839 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
XIST-206ENST00000434839 SMR3AQ99954 134 aa4.41□□□□□ -1.7
XIST-206ENST00000434839 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.71
XIST-206ENST00000434839 SETD2Q9BYW2 2564 aaPredicted RBP4.39□□□□□ -1.71
XIST-206ENST00000434839 CENPEQ02224 2701 aa4.38□□□□□ -1.71
XIST-206ENST00000434839 DNAH1Q9P2D7 4330 aa4.38□□□□□ -1.71
XIST-206ENST00000434839 CCDC168Q8NDH2 2452 aa4.38□□□□□ -1.71
XIST-206ENST00000434839 ZNF469Q96JG9 3925 aaPredicted RBP4.37□□□□□ -1.71
XIST-206ENST00000434839 KRTAP10-3P60369 221 aa4.35□□□□□ -1.71
XIST-206ENST00000434839 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
XIST-206ENST00000434839 DNAH3Q8TD57 4116 aa4.33□□□□□ -1.72
XIST-206ENST00000434839 ITPR3Q14573 2671 aa4.32□□□□□ -1.72
XIST-206ENST00000434839 CMYA5Q8N3K9 4069 aa4.32□□□□□ -1.72
XIST-206ENST00000434839 LCE2BO14633 110 aa4.29□□□□□ -1.72
XIST-206ENST00000434839 MEGF8Q7Z7M0 2845 aa4.29□□□□□ -1.72
XIST-206ENST00000434839 A0A0D9SG42 100 aa4.28□□□□□ -1.72
XIST-206ENST00000434839 XP32Q5T750 250 aa4.28□□□□□ -1.72
XIST-206ENST00000434839 SPACA4Q8TDM5 124 aa4.28□□□□□ -1.72
XIST-206ENST00000434839 TRRAPQ9Y4A5 3859 aa4.28□□□□□ -1.72
XIST-206ENST00000434839 VWFP04275 2813 aa4.28□□□□□ -1.72
XIST-206ENST00000434839 POLQO75417 2590 aa4.27□□□□□ -1.73
XIST-206ENST00000434839 NOTCH2Q04721 2471 aa4.27□□□□□ -1.73
XIST-206ENST00000434839 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
XIST-206ENST00000434839 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
XIST-206ENST00000434839 APLNQ9ULZ1 77 aa4.26□□□□□ -1.73
XIST-206ENST00000434839 S4R3F8 94 aa4.26□□□□□ -1.73
XIST-206ENST00000434839 PKD1L1Q8TDX9 2849 aa4.25□□□□□ -1.73
XIST-206ENST00000434839 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
XIST-206ENST00000434839 PLAC4Q8WY50 150 aa4.25□□□□□ -1.73
XIST-206ENST00000434839 FLNAP21333 2647 aaKnown RBP4.23□□□□□ -1.73
XIST-206ENST00000434839 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
XIST-206ENST00000434839 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
XIST-206ENST00000434839 ACANP16112 2415 aa4.2□□□□□ -1.74
XIST-206ENST00000434839 PRKDCP78527 4128 aaKnown RBP4.2□□□□□ -1.74
XIST-206ENST00000434839 RYR3Q15413 4870 aa4.18□□□□□ -1.74
XIST-206ENST00000434839 COL7A1Q02388 2944 aa4.18□□□□□ -1.74
XIST-206ENST00000434839 FRAS1Q86XX4 4008 aa4.18□□□□□ -1.74
XIST-206ENST00000434839 DNAH8Q96JB1 4490 aa4.17□□□□□ -1.74
XIST-206ENST00000434839 KRTAP12-2P59991 146 aa4.17□□□□□ -1.74
XIST-206ENST00000434839 DNAH10Q8IVF4 4471 aa4.17□□□□□ -1.74
XIST-206ENST00000434839 TGP01266 2768 aa4.17□□□□□ -1.74
XIST-206ENST00000434839 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
XIST-206ENST00000434839 RYR2Q92736 4967 aa4.16□□□□□ -1.74
XIST-206ENST00000434839 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.74
XIST-206ENST00000434839 HERC2O95714 4834 aa4.15□□□□□ -1.75
XIST-206ENST00000434839 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.75
XIST-206ENST00000434839 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
XIST-206ENST00000434839 TENM3Q9P273 2699 aa4.14□□□□□ -1.75
XIST-206ENST00000434839 LYSTQ99698 3801 aa4.13□□□□□ -1.75
XIST-206ENST00000434839 COL6A5A8TX70 2615 aa4.13□□□□□ -1.75
XIST-206ENST00000434839 DMBT1Q9UGM3 2413 aaPredicted RBP4.13□□□□□ -1.75
XIST-206ENST00000434839 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
XIST-206ENST00000434839 UBE2DNLQ8IWF7 75 aa4.12□□□□□ -1.75
XIST-206ENST00000434839 KRTAP10-11P60412 298 aa4.12□□□□□ -1.75
XIST-206ENST00000434839 Q6ZRN7 208 aaPredicted RBP4.12□□□□□ -1.75
XIST-206ENST00000434839 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
XIST-206ENST00000434839 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
XIST-206ENST00000434839 LORP23490 312 aaPredicted RBP4.11□□□□□ -1.75
XIST-206ENST00000434839 ATRQ13535 2644 aa4.09□□□□□ -1.75
XIST-206ENST00000434839 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.75
XIST-206ENST00000434839 DNAH9Q9NYC9 4486 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms