RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 LINC00313P59037 77 aa6.87□□□□□ -1.31
CLDN4-202ENST00000431918 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
CLDN4-202ENST00000431918 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
CLDN4-202ENST00000431918 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
CLDN4-202ENST00000431918 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
CLDN4-202ENST00000431918 SPANXA2-OT1Q8N9U9 137 aa6.84□□□□□ -1.31
CLDN4-202ENST00000431918 MRPL34Q9BQ48 92 aaKnown RBP6.84□□□□□ -1.31
CLDN4-202ENST00000431918 FBN3Q75N90 2809 aa6.84□□□□□ -1.32
CLDN4-202ENST00000431918 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
CLDN4-202ENST00000431918 MMP24-AS1A0A0U1RRL7 71 aa6.83□□□□□ -1.32
CLDN4-202ENST00000431918 LCE6AA0A183 80 aa6.82□□□□□ -1.32
CLDN4-202ENST00000431918 TP53AIP1Q9HCN2 124 aa6.82□□□□□ -1.32
CLDN4-202ENST00000431918 SPINK7P58062 85 aa6.81□□□□□ -1.32
CLDN4-202ENST00000431918 TYMSOSQ8TAI1 123 aa6.81□□□□□ -1.32
CLDN4-202ENST00000431918 SSBP3-AS1Q7Z2R9 100 aa6.81□□□□□ -1.32
CLDN4-202ENST00000431918 MEGF8Q7Z7M0 2845 aa6.8□□□□□ -1.32
CLDN4-202ENST00000431918 H3BPC8 53 aa6.8□□□□□ -1.32
CLDN4-202ENST00000431918 DNAH10Q8IVF4 4471 aa6.78□□□□□ -1.32
CLDN4-202ENST00000431918 LINC00483Q53H64 154 aa6.78□□□□□ -1.32
CLDN4-202ENST00000431918 DNAH9Q9NYC9 4486 aa6.78□□□□□ -1.32
CLDN4-202ENST00000431918 PRR26Q8N8Z3 221 aa6.78□□□□□ -1.32
CLDN4-202ENST00000431918 FLG2Q5D862 2391 aaPredicted RBP6.77□□□□□ -1.33
CLDN4-202ENST00000431918 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
CLDN4-202ENST00000431918 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
CLDN4-202ENST00000431918 IGKV2D-30A0A075B6S6 120 aa6.76□□□□□ -1.33
CLDN4-202ENST00000431918 IGKV2-30P06310 120 aa6.76□□□□□ -1.33
CLDN4-202ENST00000431918 A0A087X002 238 aa6.75□□□□□ -1.33
CLDN4-202ENST00000431918 NOTCH2NLQ7Z3S9 236 aa6.75□□□□□ -1.33
CLDN4-202ENST00000431918 LINC01558Q9Y6Z2 57 aa6.75□□□□□ -1.33
CLDN4-202ENST00000431918 CMYA5Q8N3K9 4069 aa6.75□□□□□ -1.33
CLDN4-202ENST00000431918 PLECQ15149 4684 aaKnown RBP6.7□□□□□ -1.34
CLDN4-202ENST00000431918 IGLV7-46A0A075B6I9 117 aa6.7□□□□□ -1.34
CLDN4-202ENST00000431918 Q96NJ1 140 aa6.7□□□□□ -1.34
CLDN4-202ENST00000431918 LYSTQ99698 3801 aa6.69□□□□□ -1.34
CLDN4-202ENST00000431918 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
CLDN4-202ENST00000431918 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
CLDN4-202ENST00000431918 A0A1B0GU69 56 aa6.65□□□□□ -1.34
CLDN4-202ENST00000431918 FAM229AH3BQW9 127 aa6.65□□□□□ -1.34
CLDN4-202ENST00000431918 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
CLDN4-202ENST00000431918 SPINK1P00995 79 aa6.64□□□□□ -1.35
CLDN4-202ENST00000431918 C9orf92A6NGG3 77 aa6.64□□□□□ -1.35
CLDN4-202ENST00000431918 KRTAP13-2Q52LG2 175 aa6.64□□□□□ -1.35
CLDN4-202ENST00000431918 PRKDCP78527 4128 aaKnown RBP6.63□□□□□ -1.35
CLDN4-202ENST00000431918 HRES1P13985 223 aa6.61□□□□□ -1.35
CLDN4-202ENST00000431918 Q5W150 140 aa6.61□□□□□ -1.35
CLDN4-202ENST00000431918 STARD9Q9P2P6 4700 aa6.59□□□□□ -1.35
CLDN4-202ENST00000431918 ACYP2P14621 99 aa6.59□□□□□ -1.35
CLDN4-202ENST00000431918 MIR22HGQ0VDD5 57 aa6.59□□□□□ -1.36
CLDN4-202ENST00000431918 DNHD1Q96M86 4753 aa6.59□□□□□ -1.36
CLDN4-202ENST00000431918 Q6ZSA8 131 aa6.56□□□□□ -1.36
CLDN4-202ENST00000431918 UQCR11O14957 56 aa6.56□□□□□ -1.36
CLDN4-202ENST00000431918 DNAH1Q9P2D7 4330 aa6.55□□□□□ -1.36
CLDN4-202ENST00000431918 DNAH7Q8WXX0 4024 aa6.53□□□□□ -1.36
CLDN4-202ENST00000431918 Q8N1X5 172 aa6.51□□□□□ -1.37
CLDN4-202ENST00000431918 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
CLDN4-202ENST00000431918 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
CLDN4-202ENST00000431918 KRTAP21-3Q3LHN1 58 aa6.48□□□□□ -1.37
CLDN4-202ENST00000431918 ASB16-AS1Q495Z4 193 aa6.48□□□□□ -1.37
CLDN4-202ENST00000431918 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
CLDN4-202ENST00000431918 DNAH11Q96DT5 4516 aa6.44□□□□□ -1.38
CLDN4-202ENST00000431918 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
CLDN4-202ENST00000431918 K7ERS5 55 aa6.41□□□□□ -1.38
CLDN4-202ENST00000431918 ROMO1P60602 79 aa6.37□□□□□ -1.39
CLDN4-202ENST00000431918 Q5VSD8 79 aa6.36□□□□□ -1.39
CLDN4-202ENST00000431918 DNAH17Q9UFH2 4485 aa6.36□□□□□ -1.39
CLDN4-202ENST00000431918 DMAC1Q96GE9 116 aa6.35□□□□□ -1.39
CLDN4-202ENST00000431918 SPINT4Q6UDR6 99 aa6.34□□□□□ -1.4
CLDN4-202ENST00000431918 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
CLDN4-202ENST00000431918 DNAH2Q9P225 4427 aa6.32□□□□□ -1.4
CLDN4-202ENST00000431918 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
CLDN4-202ENST00000431918 FRAS1Q86XX4 4008 aa6.31□□□□□ -1.4
CLDN4-202ENST00000431918 DYNC2H1Q8NCM8 4307 aaKnown RBP6.31□□□□□ -1.4
CLDN4-202ENST00000431918 KRTAP16-1A8MUX0 517 aa6.31□□□□□ -1.4
CLDN4-202ENST00000431918 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
CLDN4-202ENST00000431918 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
CLDN4-202ENST00000431918 J3QL48 77 aa6.28□□□□□ -1.4
CLDN4-202ENST00000431918 DNAH6Q9C0G6 4158 aa6.28□□□□□ -1.4
CLDN4-202ENST00000431918 LRP1BQ9NZR2 4599 aa6.27□□□□□ -1.41
CLDN4-202ENST00000431918 A0A1B0GVY2 172 aa6.27□□□□□ -1.41
CLDN4-202ENST00000431918 HECTD4Q9Y4D8 3996 aa6.26□□□□□ -1.41
CLDN4-202ENST00000431918 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
CLDN4-202ENST00000431918 A0A0A0MQY5 61 aa6.24□□□□□ -1.41
CLDN4-202ENST00000431918 DNAH5Q8TE73 4624 aa6.22□□□□□ -1.41
CLDN4-202ENST00000431918 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.42
CLDN4-202ENST00000431918 FAT1Q14517 4588 aa6.18□□□□□ -1.42
CLDN4-202ENST00000431918 A8MUU9 505 aa6.18□□□□□ -1.42
CLDN4-202ENST00000431918 ALMS1Q8TCU4 4167 aa6.16□□□□□ -1.42
CLDN4-202ENST00000431918 C20orf166-AS1Q96NR2 134 aa6.15□□□□□ -1.42
CLDN4-202ENST00000431918 NDUFAF8A1L188 74 aa6.14□□□□□ -1.43
CLDN4-202ENST00000431918 VPS13BQ7Z7G8 4022 aa6.13□□□□□ -1.43
CLDN4-202ENST00000431918 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
CLDN4-202ENST00000431918 COX6B2Q6YFQ2 88 aa6.1□□□□□ -1.43
CLDN4-202ENST00000431918 A0A1B0GU33 70 aa6.09□□□□□ -1.43
CLDN4-202ENST00000431918 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
CLDN4-202ENST00000431918 P0C880 135 aa6.07□□□□□ -1.44
CLDN4-202ENST00000431918 KRTAP10-4P60372 401 aaPredicted RBP6.07□□□□□ -1.44
CLDN4-202ENST00000431918 A0A0D9SG42 100 aa6.07□□□□□ -1.44
CLDN4-202ENST00000431918 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
CLDN4-202ENST00000431918 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
CLDN4-202ENST00000431918 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms