RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LINC00472Q9H8W2 130 aa8.14□□□□□ -1.11
COL18A1-205ENST00000423214 KRTAP9-7A8MTY7 169 aa8.13□□□□□ -1.11
COL18A1-205ENST00000423214 NOTCH2NLQ7Z3S9 236 aa8.13□□□□□ -1.11
COL18A1-205ENST00000423214 DSCR8Q96T75 97 aa8.13□□□□□ -1.11
COL18A1-205ENST00000423214 RBM12B-AS1Q9P1G2 102 aa8.13□□□□□ -1.11
COL18A1-205ENST00000423214 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
COL18A1-205ENST00000423214 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
COL18A1-205ENST00000423214 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
COL18A1-205ENST00000423214 MT2AP02795 61 aa8.09□□□□□ -1.11
COL18A1-205ENST00000423214 C9JAW5 83 aa8.08□□□□□ -1.12
COL18A1-205ENST00000423214 ATXN8Q156A1 80 aa8.08□□□□□ -1.12
COL18A1-205ENST00000423214 HRES1P13985 223 aa8.05□□□□□ -1.12
COL18A1-205ENST00000423214 MPLKIPQ8TAP9 179 aa8.04□□□□□ -1.12
COL18A1-205ENST00000423214 MT1FP04733 61 aa8.03□□□□□ -1.12
COL18A1-205ENST00000423214 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
COL18A1-205ENST00000423214 Q6ZQT0 140 aa8.02□□□□□ -1.13
COL18A1-205ENST00000423214 A0A1B0GVX0 72 aa8.01□□□□□ -1.13
COL18A1-205ENST00000423214 JMJD7-PLA2G4BH0Y9G9 81 aa8□□□□□ -1.13
COL18A1-205ENST00000423214 MTURNQ8N3F0 131 aa8□□□□□ -1.13
COL18A1-205ENST00000423214 FCGBPQ9Y6R7 5405 aaPredicted RBP7.99□□□□□ -1.13
COL18A1-205ENST00000423214 C8orf87E5RJ46 101 aa7.99□□□□□ -1.13
COL18A1-205ENST00000423214 TAX1BP3O14907 124 aa7.99□□□□□ -1.13
COL18A1-205ENST00000423214 LYRM7Q5U5X0 104 aa7.99□□□□□ -1.13
COL18A1-205ENST00000423214 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
COL18A1-205ENST00000423214 LCE2BO14633 110 aa7.97□□□□□ -1.13
COL18A1-205ENST00000423214 C21orf62-AS1Q17RA5 79 aa7.97□□□□□ -1.13
COL18A1-205ENST00000423214 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
COL18A1-205ENST00000423214 LOC110117498A0A087WWA1 95 aa7.96□□□□□ -1.14
COL18A1-205ENST00000423214 C9orf118A6NHY6 69 aa7.96□□□□□ -1.14
COL18A1-205ENST00000423214 J3KT08 172 aa7.96□□□□□ -1.14
COL18A1-205ENST00000423214 PCP4L1A6NKN8 68 aa7.95□□□□□ -1.14
COL18A1-205ENST00000423214 KRTAP9-3Q9BYQ3 159 aa7.94□□□□□ -1.14
COL18A1-205ENST00000423214 ZCCHC13Q8WW36 166 aaKnown RBP7.93□□□□□ -1.14
COL18A1-205ENST00000423214 A0A1W2PPM0 123 aa7.92□□□□□ -1.14
COL18A1-205ENST00000423214 NDUFB1O75438 58 aa7.92□□□□□ -1.14
COL18A1-205ENST00000423214 PDE6GP18545 87 aa7.92□□□□□ -1.14
COL18A1-205ENST00000423214 A0A1B0GW54 56 aa7.9□□□□□ -1.14
COL18A1-205ENST00000423214 A8MWP4 228 aa7.89□□□□□ -1.15
COL18A1-205ENST00000423214 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
COL18A1-205ENST00000423214 SPINK7P58062 85 aa7.88□□□□□ -1.15
COL18A1-205ENST00000423214 C8orf17Q9NRJ1 99 aa7.88□□□□□ -1.15
COL18A1-205ENST00000423214 NREPQ16612 68 aa7.87□□□□□ -1.15
COL18A1-205ENST00000423214 COL5A1-AS1Q5SY13 56 aa7.86□□□□□ -1.15
COL18A1-205ENST00000423214 LINC00846Q9NV44 126 aa7.86□□□□□ -1.15
COL18A1-205ENST00000423214 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
COL18A1-205ENST00000423214 H3BT86 120 aa7.84□□□□□ -1.15
COL18A1-205ENST00000423214 SPCS1Q9Y6A9 102 aa7.84□□□□□ -1.15
COL18A1-205ENST00000423214 MACF1Q9UPN3 7388 aaKnown RBP7.83□□□□□ -1.16
COL18A1-205ENST00000423214 WFDC13Q8IUB5 93 aa7.83□□□□□ -1.16
COL18A1-205ENST00000423214 PRR15Q8IV56 129 aa7.82□□□□□ -1.16
COL18A1-205ENST00000423214 Q6ZVQ6 151 aa7.81□□□□□ -1.16
COL18A1-205ENST00000423214 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
COL18A1-205ENST00000423214 K7EQZ3 153 aa7.76□□□□□ -1.17
COL18A1-205ENST00000423214 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
COL18A1-205ENST00000423214 K7EP34 96 aa7.75□□□□□ -1.17
COL18A1-205ENST00000423214 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
COL18A1-205ENST00000423214 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
COL18A1-205ENST00000423214 TMEM254Q8TBM7 123 aa7.74□□□□□ -1.17
COL18A1-205ENST00000423214 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
COL18A1-205ENST00000423214 BPY2O14599 106 aa7.72□□□□□ -1.17
COL18A1-205ENST00000423214 hDV103S1A0JD37 113 aa7.71□□□□□ -1.18
COL18A1-205ENST00000423214 NDUFS5O43920 106 aa7.71□□□□□ -1.18
COL18A1-205ENST00000423214 PRO0461Q9UI25 63 aa7.71□□□□□ -1.18
COL18A1-205ENST00000423214 Q8N9L7 120 aa7.68□□□□□ -1.18
COL18A1-205ENST00000423214 GTF2H5Q6ZYL4 71 aa7.66□□□□□ -1.18
COL18A1-205ENST00000423214 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
COL18A1-205ENST00000423214 Q5W150 140 aa7.62□□□□□ -1.19
COL18A1-205ENST00000423214 CASC2Q6XLA1 102 aa7.61□□□□□ -1.19
COL18A1-205ENST00000423214 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
COL18A1-205ENST00000423214 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
COL18A1-205ENST00000423214 HCG22E2RYF7 251 aa7.58□□□□□ -1.2
COL18A1-205ENST00000423214 UBL5Q9BZL1 73 aa7.57□□□□□ -1.2
COL18A1-205ENST00000423214 ETDBQ3ZM63 59 aa7.56□□□□□ -1.2
COL18A1-205ENST00000423214 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
COL18A1-205ENST00000423214 F8W1H4 67 aa7.55□□□□□ -1.2
COL18A1-205ENST00000423214 KRTAP6-3Q3LI67 103 aa7.53□□□□□ -1.2
COL18A1-205ENST00000423214 A0A1B0GV90 55 aa7.52□□□□□ -1.21
COL18A1-205ENST00000423214 CXCL6P80162 114 aa7.49□□□□□ -1.21
COL18A1-205ENST00000423214 C4orf26Q17RF5 130 aa7.47□□□□□ -1.21
COL18A1-205ENST00000423214 FAM236AA0A1B0GUQ0 79 aa7.44□□□□□ -1.22
COL18A1-205ENST00000423214 FAM236BA0A1B0GV22 79 aa7.44□□□□□ -1.22
COL18A1-205ENST00000423214 C5orf47Q569G3 176 aa7.41□□□□□ -1.22
COL18A1-205ENST00000423214 A6NN06 94 aa7.37□□□□□ -1.23
COL18A1-205ENST00000423214 KRTAP3-1Q9BYR8 98 aa7.35□□□□□ -1.23
COL18A1-205ENST00000423214 TP53AIP1Q9HCN2 124 aa7.35□□□□□ -1.23
COL18A1-205ENST00000423214 S4R3F8 94 aa7.35□□□□□ -1.23
COL18A1-205ENST00000423214 ACYP1P07311 99 aa7.34□□□□□ -1.23
COL18A1-205ENST00000423214 Q5VV11 94 aa7.33□□□□□ -1.24
COL18A1-205ENST00000423214 C1orf64Q8NEQ6 169 aa7.31□□□□□ -1.24
COL18A1-205ENST00000423214 MT1BP07438 61 aa7.29□□□□□ -1.24
COL18A1-205ENST00000423214 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
COL18A1-205ENST00000423214 NEBP20929 6669 aa7.29□□□□□ -1.24
COL18A1-205ENST00000423214 FAM240AA0A1B0GVK7 77 aa7.27□□□□□ -1.25
COL18A1-205ENST00000423214 LCA10Q71F78 164 aa7.26□□□□□ -1.25
COL18A1-205ENST00000423214 MUC12Q9UKN1 5478 aa7.25□□□□□ -1.25
COL18A1-205ENST00000423214 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
COL18A1-205ENST00000423214 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
COL18A1-205ENST00000423214 HIST1H4AP62805 103 aaKnown RBP7.23□□□□□ -1.25
COL18A1-205ENST00000423214 CYP4F30PQ9H0H9 118 aa7.23□□□□□ -1.25
COL18A1-205ENST00000423214 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms