RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 DNAH8Q96JB1 4490 aa7.62□□□□□ -1.19
CTCFL-204ENST00000422869 A0A087X002 238 aa7.61□□□□□ -1.19
CTCFL-204ENST00000422869 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
CTCFL-204ENST00000422869 ALMS1Q8TCU4 4167 aa7.6□□□□□ -1.19
CTCFL-204ENST00000422869 LINC00483Q53H64 154 aa7.6□□□□□ -1.19
CTCFL-204ENST00000422869 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
CTCFL-204ENST00000422869 K7EIL1 84 aa7.6□□□□□ -1.19
CTCFL-204ENST00000422869 PLECQ15149 4684 aaKnown RBP7.59□□□□□ -1.19
CTCFL-204ENST00000422869 UBE2DNLQ8IWF7 75 aa7.58□□□□□ -1.2
CTCFL-204ENST00000422869 ZNF706Q9Y5V0 76 aaPredicted RBP7.58□□□□□ -1.2
CTCFL-204ENST00000422869 A0A0A0MQY5 61 aa7.57□□□□□ -1.2
CTCFL-204ENST00000422869 WWC2-AS2Q96NR7 200 aa7.56□□□□□ -1.2
CTCFL-204ENST00000422869 HECTD4Q9Y4D8 3996 aa7.56□□□□□ -1.2
CTCFL-204ENST00000422869 APLNQ9ULZ1 77 aa7.56□□□□□ -1.2
CTCFL-204ENST00000422869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.56□□□□□ -1.2
CTCFL-204ENST00000422869 CDK2AP2O75956 126 aa7.55□□□□□ -1.2
CTCFL-204ENST00000422869 KRTAP13-3Q3SY46 172 aa7.54□□□□□ -1.2
CTCFL-204ENST00000422869 Q5W150 140 aa7.54□□□□□ -1.2
CTCFL-204ENST00000422869 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
CTCFL-204ENST00000422869 ANAPC11Q9NYG5 84 aa7.53□□□□□ -1.2
CTCFL-204ENST00000422869 Q6ZRN7 208 aaPredicted RBP7.52□□□□□ -1.21
CTCFL-204ENST00000422869 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
CTCFL-204ENST00000422869 DNAH17Q9UFH2 4485 aa7.48□□□□□ -1.21
CTCFL-204ENST00000422869 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
CTCFL-204ENST00000422869 RETNLBQ9BQ08 111 aa7.47□□□□□ -1.21
CTCFL-204ENST00000422869 MGAM2Q2M2H8 2515 aa7.46□□□□□ -1.22
CTCFL-204ENST00000422869 IGLV5-52A0A0A0MRZ9 124 aa7.46□□□□□ -1.22
CTCFL-204ENST00000422869 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
CTCFL-204ENST00000422869 VPS13DQ5THJ4 4388 aa7.45□□□□□ -1.22
CTCFL-204ENST00000422869 ACYP2P14621 99 aa7.44□□□□□ -1.22
CTCFL-204ENST00000422869 DNAH2Q9P225 4427 aa7.43□□□□□ -1.22
CTCFL-204ENST00000422869 ZNF861PO60384 105 aa7.43□□□□□ -1.22
CTCFL-204ENST00000422869 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
CTCFL-204ENST00000422869 STARD9Q9P2P6 4700 aa7.41□□□□□ -1.22
CTCFL-204ENST00000422869 FBN3Q75N90 2809 aa7.39□□□□□ -1.23
CTCFL-204ENST00000422869 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
CTCFL-204ENST00000422869 PRKDCP78527 4128 aaKnown RBP7.39□□□□□ -1.23
CTCFL-204ENST00000422869 A0A087WTM6 91 aa7.38□□□□□ -1.23
CTCFL-204ENST00000422869 CIRBP-AS1Q8TBR5 109 aa7.36□□□□□ -1.23
CTCFL-204ENST00000422869 RTL8CO15255 209 aa7.35□□□□□ -1.23
CTCFL-204ENST00000422869 A0A1B0GU69 56 aa7.35□□□□□ -1.23
CTCFL-204ENST00000422869 PLA2G1BP04054 148 aaKnown RBP7.33□□□□□ -1.24
CTCFL-204ENST00000422869 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
CTCFL-204ENST00000422869 SPATA8Q6RVD6 105 aa7.33□□□□□ -1.24
CTCFL-204ENST00000422869 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
CTCFL-204ENST00000422869 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
CTCFL-204ENST00000422869 C1orf134Q5TEV5 83 aa7.31□□□□□ -1.24
CTCFL-204ENST00000422869 DNAH6Q9C0G6 4158 aa7.31□□□□□ -1.24
CTCFL-204ENST00000422869 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
CTCFL-204ENST00000422869 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
CTCFL-204ENST00000422869 NUPR2A6NF83 97 aa7.29□□□□□ -1.24
CTCFL-204ENST00000422869 MEGF8Q7Z7M0 2845 aa7.28□□□□□ -1.24
CTCFL-204ENST00000422869 SSBP3-AS1Q7Z2R9 100 aa7.26□□□□□ -1.25
CTCFL-204ENST00000422869 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
CTCFL-204ENST00000422869 UQCR11O14957 56 aa7.25□□□□□ -1.25
CTCFL-204ENST00000422869 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
CTCFL-204ENST00000422869 DNAH5Q8TE73 4624 aa7.23□□□□□ -1.25
CTCFL-204ENST00000422869 TGP01266 2768 aa7.23□□□□□ -1.25
CTCFL-204ENST00000422869 KRTAP13-2Q52LG2 175 aa7.19□□□□□ -1.26
CTCFL-204ENST00000422869 IGKV2D-30A0A075B6S6 120 aa7.18□□□□□ -1.26
CTCFL-204ENST00000422869 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
CTCFL-204ENST00000422869 ROMO1P60602 79 aa7.12□□□□□ -1.27
CTCFL-204ENST00000422869 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
CTCFL-204ENST00000422869 PKD1P98161 4303 aa7.08□□□□□ -1.28
CTCFL-204ENST00000422869 SPINK1P00995 79 aa7.07□□□□□ -1.28
CTCFL-204ENST00000422869 KRTAP1-4P0C5Y4 121 aa7.05□□□□□ -1.28
CTCFL-204ENST00000422869 KRTAP10-2P60368 255 aa7.05□□□□□ -1.28
CTCFL-204ENST00000422869 Q8N1X5 172 aa7.05□□□□□ -1.28
CTCFL-204ENST00000422869 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
CTCFL-204ENST00000422869 FAT2Q9NYQ8 4349 aa7.01□□□□□ -1.29
CTCFL-204ENST00000422869 H0YAA0 97 aa7□□□□□ -1.29
CTCFL-204ENST00000422869 Q6ZSA8 131 aa7□□□□□ -1.29
CTCFL-204ENST00000422869 LY6G6CO95867 125 aa6.99□□□□□ -1.29
CTCFL-204ENST00000422869 P0C880 135 aa6.99□□□□□ -1.29
CTCFL-204ENST00000422869 A8MUU9 505 aa6.97□□□□□ -1.29
CTCFL-204ENST00000422869 TYMSOSQ8TAI1 123 aa6.96□□□□□ -1.29
CTCFL-204ENST00000422869 KRTAP10-1P60331 282 aa6.96□□□□□ -1.3
CTCFL-204ENST00000422869 CRIPTQ9P021 101 aa6.93□□□□□ -1.3
CTCFL-204ENST00000422869 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
CTCFL-204ENST00000422869 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
CTCFL-204ENST00000422869 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
CTCFL-204ENST00000422869 KRTAP25-1Q3LHN0 102 aa6.88□□□□□ -1.31
CTCFL-204ENST00000422869 A0A1B0GU33 70 aa6.88□□□□□ -1.31
CTCFL-204ENST00000422869 NDUFAF8A1L188 74 aa6.86□□□□□ -1.31
CTCFL-204ENST00000422869 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
CTCFL-204ENST00000422869 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
CTCFL-204ENST00000422869 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
CTCFL-204ENST00000422869 RPS29P62273 56 aaKnown RBP6.82□□□□□ -1.32
CTCFL-204ENST00000422869 PKHD1L1Q86WI1 4243 aa6.81□□□□□ -1.32
CTCFL-204ENST00000422869 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
CTCFL-204ENST00000422869 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
CTCFL-204ENST00000422869 DNHD1Q96M86 4753 aa6.78□□□□□ -1.32
CTCFL-204ENST00000422869 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
CTCFL-204ENST00000422869 COX6B2Q6YFQ2 88 aa6.73□□□□□ -1.33
CTCFL-204ENST00000422869 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.34
CTCFL-204ENST00000422869 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
CTCFL-204ENST00000422869 FAT1Q14517 4588 aa6.68□□□□□ -1.34
CTCFL-204ENST00000422869 K7ERS5 55 aa6.68□□□□□ -1.34
CTCFL-204ENST00000422869 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
CTCFL-204ENST00000422869 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms