RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 ASB16-AS1Q495Z4 193 aa3.7□□□□□ -1.82
ATP2C1-203ENST00000422190 LINC00336Q6ZUF6 198 aa3.7□□□□□ -1.82
ATP2C1-203ENST00000422190 SSBP3-AS1Q7Z2R9 100 aa3.7□□□□□ -1.82
ATP2C1-203ENST00000422190 TP53AIP1Q9HCN2 124 aa3.7□□□□□ -1.82
ATP2C1-203ENST00000422190 DNAH5Q8TE73 4624 aa3.69□□□□□ -1.82
ATP2C1-203ENST00000422190 KRTAP13-2Q52LG2 175 aa3.68□□□□□ -1.82
ATP2C1-203ENST00000422190 Q6ZSA8 131 aa3.68□□□□□ -1.82
ATP2C1-203ENST00000422190 SPANXA2-OT1Q8N9U9 137 aa3.68□□□□□ -1.82
ATP2C1-203ENST00000422190 CD164Q04900 197 aa3.68□□□□□ -1.82
ATP2C1-203ENST00000422190 PSPHP1O15172 72 aa3.66□□□□□ -1.82
ATP2C1-203ENST00000422190 ALMS1Q8TCU4 4167 aa3.66□□□□□ -1.82
ATP2C1-203ENST00000422190 BRK1Q8WUW1 75 aa3.66□□□□□ -1.82
ATP2C1-203ENST00000422190 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
ATP2C1-203ENST00000422190 HYDINQ4G0P3 5121 aa3.66□□□□□ -1.82
ATP2C1-203ENST00000422190 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.82
ATP2C1-203ENST00000422190 Q5W150 140 aa3.65□□□□□ -1.82
ATP2C1-203ENST00000422190 RETNLBQ9BQ08 111 aa3.65□□□□□ -1.83
ATP2C1-203ENST00000422190 Q1T7F1 81 aa3.65□□□□□ -1.83
ATP2C1-203ENST00000422190 C1orf195Q5TG92 126 aa3.64□□□□□ -1.83
ATP2C1-203ENST00000422190 PLA2G1BP04054 148 aaKnown RBP3.64□□□□□ -1.83
ATP2C1-203ENST00000422190 LINC00313P59037 77 aa3.64□□□□□ -1.83
ATP2C1-203ENST00000422190 COA5Q86WW8 74 aa3.64□□□□□ -1.83
ATP2C1-203ENST00000422190 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
ATP2C1-203ENST00000422190 C8orf87E5RJ46 101 aa3.63□□□□□ -1.83
ATP2C1-203ENST00000422190 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
ATP2C1-203ENST00000422190 A8MUN3 132 aa3.63□□□□□ -1.83
ATP2C1-203ENST00000422190 FAT2Q9NYQ8 4349 aa3.62□□□□□ -1.83
ATP2C1-203ENST00000422190 PKD1P98161 4303 aa3.62□□□□□ -1.83
ATP2C1-203ENST00000422190 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
ATP2C1-203ENST00000422190 LOC101927531A0A1B0GV80 90 aa3.62□□□□□ -1.83
ATP2C1-203ENST00000422190 SMR3BP02814 79 aaPredicted RBP3.62□□□□□ -1.83
ATP2C1-203ENST00000422190 Q8N9P0 234 aaPredicted RBP3.62□□□□□ -1.83
ATP2C1-203ENST00000422190 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
ATP2C1-203ENST00000422190 V9GYY9 64 aa3.61□□□□□ -1.83
ATP2C1-203ENST00000422190 LIMD2Q9BT23 127 aa3.6□□□□□ -1.83
ATP2C1-203ENST00000422190 KRTAP13-3Q3SY46 172 aa3.6□□□□□ -1.83
ATP2C1-203ENST00000422190 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
ATP2C1-203ENST00000422190 PRR15LQ9BU68 103 aa3.59□□□□□ -1.83
ATP2C1-203ENST00000422190 HRES1P13985 223 aa3.59□□□□□ -1.83
ATP2C1-203ENST00000422190 FAM229AH3BQW9 127 aa3.59□□□□□ -1.84
ATP2C1-203ENST00000422190 SPAG11AQ6PDA7 123 aa3.58□□□□□ -1.84
ATP2C1-203ENST00000422190 Q5VV11 94 aa3.57□□□□□ -1.84
ATP2C1-203ENST00000422190 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
ATP2C1-203ENST00000422190 SPINK1P00995 79 aa3.57□□□□□ -1.84
ATP2C1-203ENST00000422190 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
ATP2C1-203ENST00000422190 KRTAP16-1A8MUX0 517 aa3.56□□□□□ -1.84
ATP2C1-203ENST00000422190 LINC00304Q8N9R0 145 aa3.56□□□□□ -1.84
ATP2C1-203ENST00000422190 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
ATP2C1-203ENST00000422190 IGKV2-30P06310 120 aa3.56□□□□□ -1.84
ATP2C1-203ENST00000422190 SACSQ9NZJ4 4579 aa3.55□□□□□ -1.84
ATP2C1-203ENST00000422190 A8MU10 97 aa3.54□□□□□ -1.84
ATP2C1-203ENST00000422190 ACYP2P14621 99 aa3.54□□□□□ -1.84
ATP2C1-203ENST00000422190 DYNC1H1Q14204 4646 aaKnown RBP3.54□□□□□ -1.84
ATP2C1-203ENST00000422190 A6NED7 52 aa3.52□□□□□ -1.85
ATP2C1-203ENST00000422190 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
ATP2C1-203ENST00000422190 LINC01558Q9Y6Z2 57 aa3.52□□□□□ -1.85
ATP2C1-203ENST00000422190 FAT1Q14517 4588 aa3.52□□□□□ -1.85
ATP2C1-203ENST00000422190 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
ATP2C1-203ENST00000422190 Q75L30 129 aa3.51□□□□□ -1.85
ATP2C1-203ENST00000422190 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
ATP2C1-203ENST00000422190 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
ATP2C1-203ENST00000422190 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
ATP2C1-203ENST00000422190 RPS29P62273 56 aaKnown RBP3.48□□□□□ -1.85
ATP2C1-203ENST00000422190 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
ATP2C1-203ENST00000422190 LCA10Q71F78 164 aa3.48□□□□□ -1.85
ATP2C1-203ENST00000422190 SPINK7P58062 85 aa3.48□□□□□ -1.85
ATP2C1-203ENST00000422190 LCE2DQ5TA82 110 aaPredicted RBP3.47□□□□□ -1.85
ATP2C1-203ENST00000422190 Q8N1X5 172 aa3.47□□□□□ -1.85
ATP2C1-203ENST00000422190 APOBP04114 4563 aaKnown RBP3.46□□□□□ -1.86
ATP2C1-203ENST00000422190 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
ATP2C1-203ENST00000422190 DMBT1Q9UGM3 2413 aaPredicted RBP3.44□□□□□ -1.86
ATP2C1-203ENST00000422190 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
ATP2C1-203ENST00000422190 RYR2Q92736 4967 aa3.44□□□□□ -1.86
ATP2C1-203ENST00000422190 A0A1B0GU69 56 aa3.44□□□□□ -1.86
ATP2C1-203ENST00000422190 FLG2Q5D862 2391 aaPredicted RBP3.44□□□□□ -1.86
ATP2C1-203ENST00000422190 KMT2CQ8NEZ4 4911 aaKnown RBP3.43□□□□□ -1.86
ATP2C1-203ENST00000422190 A8MUU9 505 aa3.42□□□□□ -1.86
ATP2C1-203ENST00000422190 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
ATP2C1-203ENST00000422190 C20orf166-AS1Q96NR2 134 aa3.42□□□□□ -1.86
ATP2C1-203ENST00000422190 Q5VSD8 79 aa3.4□□□□□ -1.87
ATP2C1-203ENST00000422190 PKHD1L1Q86WI1 4243 aa3.4□□□□□ -1.87
ATP2C1-203ENST00000422190 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
ATP2C1-203ENST00000422190 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
ATP2C1-203ENST00000422190 KRTAP3-2Q9BYR7 98 aa3.37□□□□□ -1.87
ATP2C1-203ENST00000422190 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
ATP2C1-203ENST00000422190 KRTAP3-1Q9BYR8 98 aa3.36□□□□□ -1.87
ATP2C1-203ENST00000422190 A6NN06 94 aa3.36□□□□□ -1.87
ATP2C1-203ENST00000422190 UQCR11O14957 56 aa3.36□□□□□ -1.87
ATP2C1-203ENST00000422190 SEC61GP60059 68 aa3.35□□□□□ -1.87
ATP2C1-203ENST00000422190 MIR22HGQ0VDD5 57 aa3.35□□□□□ -1.87
ATP2C1-203ENST00000422190 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.88
ATP2C1-203ENST00000422190 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.88
ATP2C1-203ENST00000422190 HSPG2P98160 4391 aa3.33□□□□□ -1.88
ATP2C1-203ENST00000422190 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
ATP2C1-203ENST00000422190 TNXBP22105 4242 aa3.32□□□□□ -1.88
ATP2C1-203ENST00000422190 FAT3Q8TDW7 4589 aa3.32□□□□□ -1.88
ATP2C1-203ENST00000422190 COX6B2Q6YFQ2 88 aa3.32□□□□□ -1.88
ATP2C1-203ENST00000422190 MYCBP2O75592 4640 aa3.31□□□□□ -1.88
ATP2C1-203ENST00000422190 RYR3Q15413 4870 aa3.31□□□□□ -1.88
ATP2C1-203ENST00000422190 RYR1P21817 5038 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms