RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 UBE2AP49459 152 aa11.06□□□□□ -0.64
PPFIA3-202ENST00000421230 LINC00472Q9H8W2 130 aa11.05□□□□□ -0.64
PPFIA3-202ENST00000421230 SRRM2Q9UQ35 2752 aaKnown RBP11.05□□□□□ -0.64
PPFIA3-202ENST00000421230 SPRR1BP22528 89 aa11.04□□□□□ -0.64
PPFIA3-202ENST00000421230 A8MWP4 228 aa11.04□□□□□ -0.64
PPFIA3-202ENST00000421230 Q5VV11 94 aa11.03□□□□□ -0.64
PPFIA3-202ENST00000421230 PSORS1C2Q9UIG4 136 aa11.03□□□□□ -0.64
PPFIA3-202ENST00000421230 Q8N9P0 234 aaPredicted RBP11□□□□□ -0.65
PPFIA3-202ENST00000421230 H0Y9J4 135 aa10.99□□□□□ -0.65
PPFIA3-202ENST00000421230 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
PPFIA3-202ENST00000421230 APOBP04114 4563 aaKnown RBP10.98□□□□□ -0.65
PPFIA3-202ENST00000421230 KTN1-AS1Q86SY8 53 aa10.98□□□□□ -0.65
PPFIA3-202ENST00000421230 LIMD2Q9BT23 127 aa10.97□□□□□ -0.65
PPFIA3-202ENST00000421230 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
PPFIA3-202ENST00000421230 MMP24-AS1A0A0U1RRL7 71 aa10.93□□□□□ -0.66
PPFIA3-202ENST00000421230 A8MU10 97 aa10.93□□□□□ -0.66
PPFIA3-202ENST00000421230 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
PPFIA3-202ENST00000421230 VPS13BQ7Z7G8 4022 aa10.9□□□□□ -0.66
PPFIA3-202ENST00000421230 CHKB-CPT1BH3BT56 60 aa10.89□□□□□ -0.67
PPFIA3-202ENST00000421230 NDUFS5O43920 106 aa10.88□□□□□ -0.67
PPFIA3-202ENST00000421230 PRR15LQ9BU68 103 aa10.88□□□□□ -0.67
PPFIA3-202ENST00000421230 SMR3BP02814 79 aaPredicted RBP10.88□□□□□ -0.67
PPFIA3-202ENST00000421230 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
PPFIA3-202ENST00000421230 COA5Q86WW8 74 aa10.88□□□□□ -0.67
PPFIA3-202ENST00000421230 ASB16-AS1Q495Z4 193 aa10.87□□□□□ -0.67
PPFIA3-202ENST00000421230 EPPK1P58107 5090 aaKnown RBP10.87□□□□□ -0.67
PPFIA3-202ENST00000421230 ZNF861PO60384 105 aa10.86□□□□□ -0.67
PPFIA3-202ENST00000421230 LOC101927531A0A1B0GV80 90 aa10.86□□□□□ -0.67
PPFIA3-202ENST00000421230 FAT1Q14517 4588 aa10.86□□□□□ -0.67
PPFIA3-202ENST00000421230 Q75L30 129 aa10.85□□□□□ -0.67
PPFIA3-202ENST00000421230 Q96NJ1 140 aa10.83□□□□□ -0.68
PPFIA3-202ENST00000421230 TP53AIP1Q9HCN2 124 aa10.82□□□□□ -0.68
PPFIA3-202ENST00000421230 LCA10Q71F78 164 aa10.79□□□□□ -0.68
PPFIA3-202ENST00000421230 MOBPQ13875 183 aa10.78□□□□□ -0.68
PPFIA3-202ENST00000421230 PCOTHQ58A44 107 aa10.77□□□□□ -0.69
PPFIA3-202ENST00000421230 C8orf17Q9NRJ1 99 aa10.76□□□□□ -0.69
PPFIA3-202ENST00000421230 ATP11AUNQ6ZP68 121 aa10.75□□□□□ -0.69
PPFIA3-202ENST00000421230 ANAPC11Q9NYG5 84 aa10.75□□□□□ -0.69
PPFIA3-202ENST00000421230 HSPG2P98160 4391 aa10.75□□□□□ -0.69
PPFIA3-202ENST00000421230 RYR1P21817 5038 aa10.74□□□□□ -0.69
PPFIA3-202ENST00000421230 LINC01558Q9Y6Z2 57 aa10.73□□□□□ -0.69
PPFIA3-202ENST00000421230 A6NED7 52 aa10.73□□□□□ -0.69
PPFIA3-202ENST00000421230 ZNF706Q9Y5V0 76 aaPredicted RBP10.72□□□□□ -0.69
PPFIA3-202ENST00000421230 KIAA1109Q2LD37 5005 aa10.71□□□□□ -0.69
PPFIA3-202ENST00000421230 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
PPFIA3-202ENST00000421230 LINC00483Q53H64 154 aa10.7□□□□□ -0.7
PPFIA3-202ENST00000421230 IGLV9-49A0A0B4J1Y8 123 aa10.69□□□□□ -0.7
PPFIA3-202ENST00000421230 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
PPFIA3-202ENST00000421230 CDC42SE1Q9NRR8 79 aa10.69□□□□□ -0.7
PPFIA3-202ENST00000421230 SPTSSBQ8NFR3 76 aa10.69□□□□□ -0.7
PPFIA3-202ENST00000421230 A0A1B0GVX0 72 aa10.68□□□□□ -0.7
PPFIA3-202ENST00000421230 KRTAP10-4P60372 401 aaPredicted RBP10.68□□□□□ -0.7
PPFIA3-202ENST00000421230 H3BS24 57 aa10.66□□□□□ -0.7
PPFIA3-202ENST00000421230 SPAG11AQ6PDA7 123 aa10.66□□□□□ -0.7
PPFIA3-202ENST00000421230 A6NN06 94 aa10.66□□□□□ -0.7
PPFIA3-202ENST00000421230 HRES1P13985 223 aa10.65□□□□□ -0.7
PPFIA3-202ENST00000421230 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.71
PPFIA3-202ENST00000421230 MRPL34Q9BQ48 92 aaKnown RBP10.64□□□□□ -0.71
PPFIA3-202ENST00000421230 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
PPFIA3-202ENST00000421230 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
PPFIA3-202ENST00000421230 SPINK6Q6UWN8 80 aa10.62□□□□□ -0.71
PPFIA3-202ENST00000421230 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
PPFIA3-202ENST00000421230 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
PPFIA3-202ENST00000421230 A0A087X002 238 aa10.59□□□□□ -0.71
PPFIA3-202ENST00000421230 Q5VSD8 79 aa10.59□□□□□ -0.71
PPFIA3-202ENST00000421230 NOTCH2NLQ7Z3S9 236 aa10.59□□□□□ -0.71
PPFIA3-202ENST00000421230 PLA2G1BP04054 148 aaKnown RBP10.58□□□□□ -0.72
PPFIA3-202ENST00000421230 SPINK7P58062 85 aa10.56□□□□□ -0.72
PPFIA3-202ENST00000421230 KRTAP13-2Q52LG2 175 aa10.53□□□□□ -0.72
PPFIA3-202ENST00000421230 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
PPFIA3-202ENST00000421230 PKHD1L1Q86WI1 4243 aa10.52□□□□□ -0.73
PPFIA3-202ENST00000421230 Q5W150 140 aa10.5□□□□□ -0.73
PPFIA3-202ENST00000421230 Q8N1X5 172 aa10.48□□□□□ -0.73
PPFIA3-202ENST00000421230 PRR26Q8N8Z3 221 aa10.47□□□□□ -0.73
PPFIA3-202ENST00000421230 BIRC6Q9NR09 4857 aa10.45□□□□□ -0.74
PPFIA3-202ENST00000421230 SSBP3-AS1Q7Z2R9 100 aa10.45□□□□□ -0.74
PPFIA3-202ENST00000421230 LRP1Q07954 4544 aaKnown RBP10.44□□□□□ -0.74
PPFIA3-202ENST00000421230 TYMSOSQ8TAI1 123 aa10.42□□□□□ -0.74
PPFIA3-202ENST00000421230 ACYP2P14621 99 aa10.41□□□□□ -0.74
PPFIA3-202ENST00000421230 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
PPFIA3-202ENST00000421230 DMAC1Q96GE9 116 aa10.36□□□□□ -0.75
PPFIA3-202ENST00000421230 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
PPFIA3-202ENST00000421230 KRTAP4-5Q9BYR2 181 aa10.35□□□□□ -0.75
PPFIA3-202ENST00000421230 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
PPFIA3-202ENST00000421230 HERC2O95714 4834 aa10.3□□□□□ -0.76
PPFIA3-202ENST00000421230 LINC01554Q52M75 96 aa10.3□□□□□ -0.76
PPFIA3-202ENST00000421230 LINC00304Q8N9R0 145 aa10.29□□□□□ -0.76
PPFIA3-202ENST00000421230 TNXBP22105 4242 aa10.29□□□□□ -0.76
PPFIA3-202ENST00000421230 ABCA13Q86UQ4 5058 aa10.25□□□□□ -0.77
PPFIA3-202ENST00000421230 SPINK1P00995 79 aa10.23□□□□□ -0.77
PPFIA3-202ENST00000421230 IGKV2-30P06310 120 aa10.23□□□□□ -0.77
PPFIA3-202ENST00000421230 LINC00313P59037 77 aa10.23□□□□□ -0.77
PPFIA3-202ENST00000421230 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
PPFIA3-202ENST00000421230 A0A1B0GU69 56 aa10.22□□□□□ -0.77
PPFIA3-202ENST00000421230 SPATA8Q6RVD6 105 aa10.21□□□□□ -0.77
PPFIA3-202ENST00000421230 RETNLBQ9BQ08 111 aa10.16□□□□□ -0.78
PPFIA3-202ENST00000421230 MT1HL1P0DM35 61 aa10.15□□□□□ -0.78
PPFIA3-202ENST00000421230 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
PPFIA3-202ENST00000421230 PRAC1Q96KF2 57 aa10.14□□□□□ -0.79
PPFIA3-202ENST00000421230 RPS29P62273 56 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms