RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 MDFIQ99750 246 aa8.92□□□□□ -0.98
SH3PXD2A-204ENST00000420222 FRAS1Q86XX4 4008 aa8.91□□□□□ -0.98
SH3PXD2A-204ENST00000420222 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.98
SH3PXD2A-204ENST00000420222 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
SH3PXD2A-204ENST00000420222 TGP01266 2768 aa8.89□□□□□ -0.99
SH3PXD2A-204ENST00000420222 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
SH3PXD2A-204ENST00000420222 WWC2-AS2Q96NR7 200 aa8.88□□□□□ -0.99
SH3PXD2A-204ENST00000420222 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
SH3PXD2A-204ENST00000420222 NBDYA0A0U1RRE5 68 aa8.87□□□□□ -0.99
SH3PXD2A-204ENST00000420222 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
SH3PXD2A-204ENST00000420222 LINC00313P59037 77 aa8.85□□□□□ -0.99
SH3PXD2A-204ENST00000420222 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
SH3PXD2A-204ENST00000420222 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
SH3PXD2A-204ENST00000420222 DNAH3Q8TD57 4116 aa8.83□□□□□ -1
SH3PXD2A-204ENST00000420222 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
SH3PXD2A-204ENST00000420222 ACYP2P14621 99 aa8.82□□□□□ -1
SH3PXD2A-204ENST00000420222 A0A1B0GU69 56 aa8.81□□□□□ -1
SH3PXD2A-204ENST00000420222 FBN3Q75N90 2809 aa8.8□□□□□ -1
SH3PXD2A-204ENST00000420222 PLECQ15149 4684 aaKnown RBP8.78□□□□□ -1
SH3PXD2A-204ENST00000420222 RTL8CO15255 209 aa8.78□□□□□ -1
SH3PXD2A-204ENST00000420222 IGLV5-52A0A0A0MRZ9 124 aa8.77□□□□□ -1.01
SH3PXD2A-204ENST00000420222 ZNF861PO60384 105 aa8.77□□□□□ -1.01
SH3PXD2A-204ENST00000420222 LINC00483Q53H64 154 aa8.77□□□□□ -1.01
SH3PXD2A-204ENST00000420222 IGKV2D-30A0A075B6S6 120 aa8.75□□□□□ -1.01
SH3PXD2A-204ENST00000420222 IGKV2-30P06310 120 aa8.75□□□□□ -1.01
SH3PXD2A-204ENST00000420222 MEGF8Q7Z7M0 2845 aa8.75□□□□□ -1.01
SH3PXD2A-204ENST00000420222 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
SH3PXD2A-204ENST00000420222 A0A087WTM6 91 aa8.74□□□□□ -1.01
SH3PXD2A-204ENST00000420222 SPINK1P00995 79 aa8.74□□□□□ -1.01
SH3PXD2A-204ENST00000420222 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
SH3PXD2A-204ENST00000420222 C8orf87E5RJ46 101 aa8.67□□□□□ -1.02
SH3PXD2A-204ENST00000420222 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
SH3PXD2A-204ENST00000420222 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
SH3PXD2A-204ENST00000420222 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
SH3PXD2A-204ENST00000420222 IGLV7-43P04211 117 aa8.63□□□□□ -1.03
SH3PXD2A-204ENST00000420222 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
SH3PXD2A-204ENST00000420222 HECTD4Q9Y4D8 3996 aa8.62□□□□□ -1.03
SH3PXD2A-204ENST00000420222 KMT2AQ03164 3969 aa8.62□□□□□ -1.03
SH3PXD2A-204ENST00000420222 NUPR2A6NF83 97 aa8.62□□□□□ -1.03
SH3PXD2A-204ENST00000420222 UQCR11O14957 56 aa8.61□□□□□ -1.03
SH3PXD2A-204ENST00000420222 STARD9Q9P2P6 4700 aa8.6□□□□□ -1.03
SH3PXD2A-204ENST00000420222 Q8N1X5 172 aa8.58□□□□□ -1.04
SH3PXD2A-204ENST00000420222 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
SH3PXD2A-204ENST00000420222 LINC01554Q52M75 96 aa8.56□□□□□ -1.04
SH3PXD2A-204ENST00000420222 CSAG1Q6PB30 78 aa8.56□□□□□ -1.04
SH3PXD2A-204ENST00000420222 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
SH3PXD2A-204ENST00000420222 SPATA8Q6RVD6 105 aa8.54□□□□□ -1.04
SH3PXD2A-204ENST00000420222 FLG2Q5D862 2391 aaPredicted RBP8.53□□□□□ -1.04
SH3PXD2A-204ENST00000420222 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
SH3PXD2A-204ENST00000420222 LY6G6CO95867 125 aa8.51□□□□□ -1.05
SH3PXD2A-204ENST00000420222 SSBP3-AS1Q7Z2R9 100 aa8.5□□□□□ -1.05
SH3PXD2A-204ENST00000420222 C1orf134Q5TEV5 83 aa8.49□□□□□ -1.05
SH3PXD2A-204ENST00000420222 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
SH3PXD2A-204ENST00000420222 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
SH3PXD2A-204ENST00000420222 KRTAP13-2Q52LG2 175 aa8.48□□□□□ -1.05
SH3PXD2A-204ENST00000420222 C4orf48Q5BLP8 95 aa8.46□□□□□ -1.06
SH3PXD2A-204ENST00000420222 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
SH3PXD2A-204ENST00000420222 VPS13DQ5THJ4 4388 aa8.42□□□□□ -1.06
SH3PXD2A-204ENST00000420222 DNAH11Q96DT5 4516 aa8.41□□□□□ -1.06
SH3PXD2A-204ENST00000420222 DYNC2H1Q8NCM8 4307 aaKnown RBP8.4□□□□□ -1.06
SH3PXD2A-204ENST00000420222 KRTAP16-1A8MUX0 517 aa8.4□□□□□ -1.07
SH3PXD2A-204ENST00000420222 H3BS24 57 aa8.4□□□□□ -1.07
SH3PXD2A-204ENST00000420222 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
SH3PXD2A-204ENST00000420222 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
SH3PXD2A-204ENST00000420222 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
SH3PXD2A-204ENST00000420222 C9orf92A6NGG3 77 aa8.33□□□□□ -1.08
SH3PXD2A-204ENST00000420222 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
SH3PXD2A-204ENST00000420222 LRP1BQ9NZR2 4599 aa8.3□□□□□ -1.08
SH3PXD2A-204ENST00000420222 KRTAP10-1P60331 282 aa8.29□□□□□ -1.08
SH3PXD2A-204ENST00000420222 H0YAA0 97 aa8.27□□□□□ -1.09
SH3PXD2A-204ENST00000420222 Q6ZSA8 131 aa8.27□□□□□ -1.09
SH3PXD2A-204ENST00000420222 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
SH3PXD2A-204ENST00000420222 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
SH3PXD2A-204ENST00000420222 A0A1B0GU33 70 aa8.2□□□□□ -1.1
SH3PXD2A-204ENST00000420222 VPS13BQ7Z7G8 4022 aa8.2□□□□□ -1.1
SH3PXD2A-204ENST00000420222 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
SH3PXD2A-204ENST00000420222 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
SH3PXD2A-204ENST00000420222 A8MUU9 505 aa8.16□□□□□ -1.1
SH3PXD2A-204ENST00000420222 KRTAP25-1Q3LHN0 102 aa8.12□□□□□ -1.11
SH3PXD2A-204ENST00000420222 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
SH3PXD2A-204ENST00000420222 H1FX-AS1Q4G0G2 97 aa8.1□□□□□ -1.11
SH3PXD2A-204ENST00000420222 HYDINQ4G0P3 5121 aa8.07□□□□□ -1.12
SH3PXD2A-204ENST00000420222 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
SH3PXD2A-204ENST00000420222 A0A0D9SG42 100 aa8.06□□□□□ -1.12
SH3PXD2A-204ENST00000420222 K7ERS5 55 aa8.05□□□□□ -1.12
SH3PXD2A-204ENST00000420222 ROMO1P60602 79 aa8.02□□□□□ -1.12
SH3PXD2A-204ENST00000420222 PKD1P98161 4303 aa7.99□□□□□ -1.13
SH3PXD2A-204ENST00000420222 COX6B2Q6YFQ2 88 aa7.99□□□□□ -1.13
SH3PXD2A-204ENST00000420222 PKHD1P08F94 4074 aa7.98□□□□□ -1.13
SH3PXD2A-204ENST00000420222 DNHD1Q96M86 4753 aa7.97□□□□□ -1.13
SH3PXD2A-204ENST00000420222 FAT1Q14517 4588 aa7.91□□□□□ -1.14
SH3PXD2A-204ENST00000420222 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.14
SH3PXD2A-204ENST00000420222 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
SH3PXD2A-204ENST00000420222 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
SH3PXD2A-204ENST00000420222 P0C880 135 aa7.83□□□□□ -1.16
SH3PXD2A-204ENST00000420222 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
SH3PXD2A-204ENST00000420222 KRTAP13-4Q3LI77 160 aa7.81□□□□□ -1.16
SH3PXD2A-204ENST00000420222 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
SH3PXD2A-204ENST00000420222 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
SH3PXD2A-204ENST00000420222 DYNC1H1Q14204 4646 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 1703.5 ms