RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CCDC179H3BU77 68 aa5.8□□□□□ -1.48
SSBP3-206ENST00000420121 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
SSBP3-206ENST00000420121 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
SSBP3-206ENST00000420121 H0YGX0 51 aa5.78□□□□□ -1.48
SSBP3-206ENST00000420121 NDUFV3P56181 108 aaKnown RBP5.78□□□□□ -1.48
SSBP3-206ENST00000420121 RAB37Q96AX2 223 aa5.78□□□□□ -1.48
SSBP3-206ENST00000420121 OBSCN-AS1Q96MR7 158 aa5.78□□□□□ -1.48
SSBP3-206ENST00000420121 Q75L30 129 aa5.77□□□□□ -1.49
SSBP3-206ENST00000420121 NAA38Q9BRA0 125 aaKnown RBP5.77□□□□□ -1.49
SSBP3-206ENST00000420121 F8W1H4 67 aa5.76□□□□□ -1.49
SSBP3-206ENST00000420121 LST1O00453 97 aa5.76□□□□□ -1.49
SSBP3-206ENST00000420121 FXYD2P54710 66 aa5.76□□□□□ -1.49
SSBP3-206ENST00000420121 CEND1Q8N111 149 aa5.76□□□□□ -1.49
SSBP3-206ENST00000420121 Q96NJ1 140 aa5.75□□□□□ -1.49
SSBP3-206ENST00000420121 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
SSBP3-206ENST00000420121 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
SSBP3-206ENST00000420121 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
SSBP3-206ENST00000420121 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
SSBP3-206ENST00000420121 SPCS1Q9Y6A9 102 aa5.74□□□□□ -1.49
SSBP3-206ENST00000420121 PRO1854Q9UHT4 67 aa5.73□□□□□ -1.49
SSBP3-206ENST00000420121 A0A087WSZ3 146 aa5.72□□□□□ -1.49
SSBP3-206ENST00000420121 A0A1W2PNM2 257 aa5.72□□□□□ -1.49
SSBP3-206ENST00000420121 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
SSBP3-206ENST00000420121 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
SSBP3-206ENST00000420121 A0A1W2PPM0 123 aa5.71□□□□□ -1.5
SSBP3-206ENST00000420121 A8MUU9 505 aa5.71□□□□□ -1.5
SSBP3-206ENST00000420121 H3BMG7 143 aa5.71□□□□□ -1.5
SSBP3-206ENST00000420121 FABP2P12104 132 aa5.71□□□□□ -1.5
SSBP3-206ENST00000420121 ATP11AUNQ6ZP68 121 aa5.71□□□□□ -1.5
SSBP3-206ENST00000420121 C20orf166-AS1Q96NR2 134 aa5.71□□□□□ -1.5
SSBP3-206ENST00000420121 SNCGO76070 127 aa5.7□□□□□ -1.5
SSBP3-206ENST00000420121 FAM236DA0A1B0GTK5 79 aa5.69□□□□□ -1.5
SSBP3-206ENST00000420121 M0R2T5 61 aa5.69□□□□□ -1.5
SSBP3-206ENST00000420121 FAM236CP0DP71 79 aa5.69□□□□□ -1.5
SSBP3-206ENST00000420121 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
SSBP3-206ENST00000420121 K7ERJ3 54 aa5.67□□□□□ -1.5
SSBP3-206ENST00000420121 DSCR10P59022 87 aa5.66□□□□□ -1.5
SSBP3-206ENST00000420121 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
SSBP3-206ENST00000420121 TMEM258P61165 79 aa5.65□□□□□ -1.5
SSBP3-206ENST00000420121 TRBV7-4A0A0J9YYF1 115 aa5.64□□□□□ -1.51
SSBP3-206ENST00000420121 ORMDL1Q9P0S3 153 aa5.64□□□□□ -1.51
SSBP3-206ENST00000420121 UQCRQO14949 82 aa5.63□□□□□ -1.51
SSBP3-206ENST00000420121 ANKRD29Q8N6D5 301 aa5.63□□□□□ -1.51
SSBP3-206ENST00000420121 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
SSBP3-206ENST00000420121 NOTCH2NLQ7Z3S9 236 aa5.62□□□□□ -1.51
SSBP3-206ENST00000420121 LINC00472Q9H8W2 130 aa5.62□□□□□ -1.51
SSBP3-206ENST00000420121 DNAL4O96015 105 aa5.61□□□□□ -1.51
SSBP3-206ENST00000420121 PSMB2P49721 201 aa5.61□□□□□ -1.51
SSBP3-206ENST00000420121 TRBV20-1A0A075B6N2 111 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 FAM236AA0A1B0GUQ0 79 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 FAM236BA0A1B0GV22 79 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 H3BQ85 93 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 TMEM256-PLSCR3K7ERE1 68 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 IGKV4-1P06312 121 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 LINC00313P59037 77 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 PRO0461Q9UI25 63 aa5.6□□□□□ -1.51
SSBP3-206ENST00000420121 DEFB116Q30KQ4 102 aa5.59□□□□□ -1.51
SSBP3-206ENST00000420121 LYRM7Q5U5X0 104 aa5.59□□□□□ -1.51
SSBP3-206ENST00000420121 CCKP06307 115 aa5.58□□□□□ -1.52
SSBP3-206ENST00000420121 COX6CP09669 75 aa5.58□□□□□ -1.52
SSBP3-206ENST00000420121 TRACP01848 142 aa5.57□□□□□ -1.52
SSBP3-206ENST00000420121 MPLKIPQ8TAP9 179 aa5.57□□□□□ -1.52
SSBP3-206ENST00000420121 HRES1P13985 223 aa5.55□□□□□ -1.52
SSBP3-206ENST00000420121 IMUPQ9GZP8 106 aa5.54□□□□□ -1.52
SSBP3-206ENST00000420121 IGHV6-1A0A0B4J1U7 121 aa5.53□□□□□ -1.52
SSBP3-206ENST00000420121 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
SSBP3-206ENST00000420121 COX7CP15954 63 aa5.52□□□□□ -1.53
SSBP3-206ENST00000420121 RBM3P98179 157 aaKnown RBP5.52□□□□□ -1.53
SSBP3-206ENST00000420121 SCGB1C2P0DMR2 95 aa5.51□□□□□ -1.53
SSBP3-206ENST00000420121 FAM240AA0A1B0GVK7 77 aa5.5□□□□□ -1.53
SSBP3-206ENST00000420121 MT2AP02795 61 aa5.5□□□□□ -1.53
SSBP3-206ENST00000420121 BAALC-AS2P0C853 105 aa5.5□□□□□ -1.53
SSBP3-206ENST00000420121 C8orf87E5RJ46 101 aa5.49□□□□□ -1.53
SSBP3-206ENST00000420121 DSCR8Q96T75 97 aa5.49□□□□□ -1.53
SSBP3-206ENST00000420121 USH2AO75445 5202 aa5.49□□□□□ -1.53
SSBP3-206ENST00000420121 Q6ZQT0 140 aa5.48□□□□□ -1.53
SSBP3-206ENST00000420121 PRR15Q8IV56 129 aa5.48□□□□□ -1.53
SSBP3-206ENST00000420121 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
SSBP3-206ENST00000420121 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
SSBP3-206ENST00000420121 MT1FP04733 61 aa5.46□□□□□ -1.54
SSBP3-206ENST00000420121 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
SSBP3-206ENST00000420121 ZCCHC13Q8WW36 166 aaKnown RBP5.45□□□□□ -1.54
SSBP3-206ENST00000420121 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
SSBP3-206ENST00000420121 ATOX1O00244 68 aa5.44□□□□□ -1.54
SSBP3-206ENST00000420121 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
SSBP3-206ENST00000420121 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
SSBP3-206ENST00000420121 LOC110117498A0A087WWA1 95 aa5.43□□□□□ -1.54
SSBP3-206ENST00000420121 ATXN8Q156A1 80 aa5.43□□□□□ -1.54
SSBP3-206ENST00000420121 IGKV3D-7A0A0C4DH55 119 aa5.41□□□□□ -1.54
SSBP3-206ENST00000420121 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
SSBP3-206ENST00000420121 H3BT86 120 aa5.41□□□□□ -1.54
SSBP3-206ENST00000420121 SPINK7P58062 85 aa5.41□□□□□ -1.54
SSBP3-206ENST00000420121 C8orf17Q9NRJ1 99 aa5.41□□□□□ -1.54
SSBP3-206ENST00000420121 A0A1B0GW54 56 aa5.4□□□□□ -1.54
SSBP3-206ENST00000420121 A8MWP4 228 aa5.4□□□□□ -1.54
SSBP3-206ENST00000420121 C14orf132Q9NPU4 83 aa5.39□□□□□ -1.55
SSBP3-206ENST00000420121 NDUFB1O75438 58 aa5.38□□□□□ -1.55
SSBP3-206ENST00000420121 PDE6GP18545 87 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms