RNA–Protein interactions for RNA: ENST00000418381.5

UBR3-203, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 7,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-203ENST00000418381 ZNF292O60281 2723 aa9.94□□□□□ -0.82
UBR3-203ENST00000418381 ASH1LQ9NR48 2969 aaKnown RBP9.9□□□□□ -0.82
UBR3-203ENST00000418381 ADGRG4Q8IZF6 3080 aa9.89□□□□□ -0.83
UBR3-203ENST00000418381 P0C880 135 aa9.89□□□□□ -0.83
UBR3-203ENST00000418381 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
UBR3-203ENST00000418381 KRTAP10-10P60014 251 aa9.87□□□□□ -0.83
UBR3-203ENST00000418381 NDUFAF8A1L188 74 aa9.85□□□□□ -0.83
UBR3-203ENST00000418381 RPS29P62273 56 aaKnown RBP9.85□□□□□ -0.83
UBR3-203ENST00000418381 KRTAP25-1Q3LHN0 102 aa9.85□□□□□ -0.83
UBR3-203ENST00000418381 TACC2O95359 2948 aa9.84□□□□□ -0.83
UBR3-203ENST00000418381 IGSF10Q6WRI0 2623 aa9.83□□□□□ -0.84
UBR3-203ENST00000418381 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
UBR3-203ENST00000418381 KRTAP13-2Q52LG2 175 aa9.79□□□□□ -0.84
UBR3-203ENST00000418381 KRTAP4-16G5E9R7 235 aaPredicted RBP9.79□□□□□ -0.84
UBR3-203ENST00000418381 COL12A1Q99715 3063 aa9.78□□□□□ -0.84
UBR3-203ENST00000418381 ATMQ13315 3056 aa9.75□□□□□ -0.85
UBR3-203ENST00000418381 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
UBR3-203ENST00000418381 ASB16-AS1Q495Z4 193 aa9.72□□□□□ -0.85
UBR3-203ENST00000418381 KRTAP29-1A8MX34 341 aaPredicted RBP9.71□□□□□ -0.86
UBR3-203ENST00000418381 Q6ZRN7 208 aaPredicted RBP9.7□□□□□ -0.86
UBR3-203ENST00000418381 ITPR1Q14643 2758 aa9.67□□□□□ -0.86
UBR3-203ENST00000418381 DCHS1Q96JQ0 3298 aa9.67□□□□□ -0.86
UBR3-203ENST00000418381 ZZEF1O43149 2961 aa9.66□□□□□ -0.86
UBR3-203ENST00000418381 DMXL1Q9Y485 3027 aa9.64□□□□□ -0.87
UBR3-203ENST00000418381 LOC400499M0QZD8 3231 aa9.64□□□□□ -0.87
UBR3-203ENST00000418381 UTP20O75691 2785 aaKnown RBP9.64□□□□□ -0.87
UBR3-203ENST00000418381 ASPMQ8IZT6 3477 aa9.63□□□□□ -0.87
UBR3-203ENST00000418381 UBR5O95071 2799 aaPredicted RBP9.62□□□□□ -0.87
UBR3-203ENST00000418381 NBPF19A0A087WUL8 3843 aa9.6□□□□□ -0.87
UBR3-203ENST00000418381 XP32Q5T750 250 aa9.52□□□□□ -0.88
UBR3-203ENST00000418381 HIVEP1P15822 2718 aa9.51□□□□□ -0.89
UBR3-203ENST00000418381 TNRC18O15417 2968 aaPredicted RBP9.5□□□□□ -0.89
UBR3-203ENST00000418381 LAMA5O15230 3695 aa9.47□□□□□ -0.89
UBR3-203ENST00000418381 CELSR2Q9HCU4 2923 aa9.45□□□□□ -0.9
UBR3-203ENST00000418381 KRTAP21-3Q3LHN1 58 aa9.45□□□□□ -0.9
UBR3-203ENST00000418381 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
UBR3-203ENST00000418381 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
UBR3-203ENST00000418381 PP632Q6XCG6 107 aa9.41□□□□□ -0.9
UBR3-203ENST00000418381 ZFHX4Q86UP3 3567 aa9.41□□□□□ -0.9
UBR3-203ENST00000418381 A6NN06 94 aa9.37□□□□□ -0.91
UBR3-203ENST00000418381 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
UBR3-203ENST00000418381 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
UBR3-203ENST00000418381 TPRXLQ17RH7 258 aa9.31□□□□□ -0.92
UBR3-203ENST00000418381 FLNCQ14315 2725 aa9.28□□□□□ -0.92
UBR3-203ENST00000418381 RELNP78509 3460 aa9.26□□□□□ -0.93
UBR3-203ENST00000418381 DCHS2Q6V1P9 2916 aa9.23□□□□□ -0.93
UBR3-203ENST00000418381 FBN2P35556 2912 aa9.22□□□□□ -0.93
UBR3-203ENST00000418381 ZANQ9Y493 2812 aa9.17□□□□□ -0.94
UBR3-203ENST00000418381 CELSR1Q9NYQ6 3014 aa9.16□□□□□ -0.94
UBR3-203ENST00000418381 HRNRQ86YZ3 2850 aaPredicted RBP9.1□□□□□ -0.95
UBR3-203ENST00000418381 DMDP11532 3685 aa9.1□□□□□ -0.95
UBR3-203ENST00000418381 SMG1Q96Q15 3661 aaKnown RBP9.09□□□□□ -0.95
UBR3-203ENST00000418381 H0YAA0 97 aa9.09□□□□□ -0.95
UBR3-203ENST00000418381 KRTAP1-4P0C5Y4 121 aa9.09□□□□□ -0.95
UBR3-203ENST00000418381 NF1P21359 2839 aa9.04□□□□□ -0.96
UBR3-203ENST00000418381 TENM4Q6N022 2769 aa9.02□□□□□ -0.96
UBR3-203ENST00000418381 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.97
UBR3-203ENST00000418381 SPENQ96T58 3664 aaKnown RBP9.01□□□□□ -0.97
UBR3-203ENST00000418381 CUBNO60494 3623 aa8.98□□□□□ -0.97
UBR3-203ENST00000418381 SVEP1Q4LDE5 3571 aa8.98□□□□□ -0.97
UBR3-203ENST00000418381 NIPBLQ6KC79 2804 aaeCLIP8.96□□□□□ -0.97
UBR3-203ENST00000418381 TENM3Q9P273 2699 aa8.94□□□□□ -0.98
UBR3-203ENST00000418381 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
UBR3-203ENST00000418381 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
UBR3-203ENST00000418381 ZFHX3Q15911 3703 aa8.85□□□□□ -0.99
UBR3-203ENST00000418381 VWFP04275 2813 aa8.84□□□□□ -0.99
UBR3-203ENST00000418381 PKD1L1Q8TDX9 2849 aa8.83□□□□□ -1
UBR3-203ENST00000418381 TGP01266 2768 aa8.8□□□□□ -1
UBR3-203ENST00000418381 KRTAP15-1Q3LI76 137 aa8.8□□□□□ -1
UBR3-203ENST00000418381 TENM2Q9NT68 2774 aa8.8□□□□□ -1
UBR3-203ENST00000418381 MXRA5Q9NR99 2828 aa8.79□□□□□ -1
UBR3-203ENST00000418381 PDZD2O15018 2839 aa8.76□□□□□ -1.01
UBR3-203ENST00000418381 MUC3AQ02505 3323 aa8.65□□□□□ -1.03
UBR3-203ENST00000418381 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
UBR3-203ENST00000418381 CSMD2Q7Z408 3487 aa8.47□□□□□ -1.05
UBR3-203ENST00000418381 VPS13CQ709C8 3753 aa8.41□□□□□ -1.06
UBR3-203ENST00000418381 BSNQ9UPA5 3926 aa8.38□□□□□ -1.07
UBR3-203ENST00000418381 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
UBR3-203ENST00000418381 MEGF8Q7Z7M0 2845 aa8.31□□□□□ -1.08
UBR3-203ENST00000418381 TRRAPQ9Y4A5 3859 aa8.3□□□□□ -1.08
UBR3-203ENST00000418381 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.09
UBR3-203ENST00000418381 COL7A1Q02388 2944 aa8.25□□□□□ -1.09
UBR3-203ENST00000418381 KRTAP10-12P60413 245 aa8.21□□□□□ -1.1
UBR3-203ENST00000418381 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
UBR3-203ENST00000418381 SRRM2Q9UQ35 2752 aaKnown RBP8.11□□□□□ -1.11
UBR3-203ENST00000418381 LORP23490 312 aaPredicted RBP8.09□□□□□ -1.11
UBR3-203ENST00000418381 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
UBR3-203ENST00000418381 OTOGQ6ZRI0 2925 aa8.01□□□□□ -1.13
UBR3-203ENST00000418381 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
UBR3-203ENST00000418381 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
UBR3-203ENST00000418381 ANK3Q12955 4377 aaKnown RBP7.94□□□□□ -1.14
UBR3-203ENST00000418381 KRTAP10-5P60370 271 aa7.91□□□□□ -1.14
UBR3-203ENST00000418381 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
UBR3-203ENST00000418381 KRTAP8-1Q8IUC2 63 aa7.87□□□□□ -1.15
UBR3-203ENST00000418381 AKAP9Q99996 3911 aa7.84□□□□□ -1.15
UBR3-203ENST00000418381 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
UBR3-203ENST00000418381 INE1O15225 51 aa7.8□□□□□ -1.16
UBR3-203ENST00000418381 ZNF469Q96JG9 3925 aaPredicted RBP7.8□□□□□ -1.16
UBR3-203ENST00000418381 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
UBR3-203ENST00000418381 MT1HL1P0DM35 61 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms