RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 TRBV20-1A0A075B6N2 111 aa10.57□□□□□ -0.72
PKNOX1-202ENST00000418336 IGHV6-1A0A0B4J1U7 121 aa10.56□□□□□ -0.72
PKNOX1-202ENST00000418336 A0A1B0GVX0 72 aa10.56□□□□□ -0.72
PKNOX1-202ENST00000418336 FSIP2Q5CZC0 6907 aa10.56□□□□□ -0.72
PKNOX1-202ENST00000418336 C9orf118A6NHY6 69 aa10.55□□□□□ -0.72
PKNOX1-202ENST00000418336 COX6B2Q6YFQ2 88 aa10.54□□□□□ -0.72
PKNOX1-202ENST00000418336 C21orf62-AS1Q17RA5 79 aa10.53□□□□□ -0.72
PKNOX1-202ENST00000418336 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
PKNOX1-202ENST00000418336 C14orf132Q9NPU4 83 aa10.53□□□□□ -0.72
PKNOX1-202ENST00000418336 A0A1B0GW54 56 aa10.51□□□□□ -0.73
PKNOX1-202ENST00000418336 C8orf87E5RJ46 101 aa10.51□□□□□ -0.73
PKNOX1-202ENST00000418336 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
PKNOX1-202ENST00000418336 J3KT08 172 aa10.49□□□□□ -0.73
PKNOX1-202ENST00000418336 PDE6GP18545 87 aa10.48□□□□□ -0.73
PKNOX1-202ENST00000418336 MPLKIPQ8TAP9 179 aa10.47□□□□□ -0.73
PKNOX1-202ENST00000418336 H3BT86 120 aa10.44□□□□□ -0.74
PKNOX1-202ENST00000418336 M0R2T5 61 aa10.43□□□□□ -0.74
PKNOX1-202ENST00000418336 HRES1P13985 223 aa10.43□□□□□ -0.74
PKNOX1-202ENST00000418336 MTURNQ8N3F0 131 aa10.43□□□□□ -0.74
PKNOX1-202ENST00000418336 IGKV3D-7A0A0C4DH55 119 aa10.42□□□□□ -0.74
PKNOX1-202ENST00000418336 A8MWP4 228 aa10.42□□□□□ -0.74
PKNOX1-202ENST00000418336 Q8N9P0 234 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-202ENST00000418336 CRCT1Q9UGL9 99 aa10.39□□□□□ -0.75
PKNOX1-202ENST00000418336 C8orf17Q9NRJ1 99 aa10.38□□□□□ -0.75
PKNOX1-202ENST00000418336 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
PKNOX1-202ENST00000418336 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
PKNOX1-202ENST00000418336 NDUFB1O75438 58 aa10.34□□□□□ -0.75
PKNOX1-202ENST00000418336 PRR15Q8IV56 129 aa10.34□□□□□ -0.75
PKNOX1-202ENST00000418336 NREPQ16612 68 aa10.33□□□□□ -0.76
PKNOX1-202ENST00000418336 KRTAP9-8Q9BYQ0 159 aa10.31□□□□□ -0.76
PKNOX1-202ENST00000418336 SPCS1Q9Y6A9 102 aa10.31□□□□□ -0.76
PKNOX1-202ENST00000418336 MMP24-AS1A0A0U1RRL7 71 aa10.3□□□□□ -0.76
PKNOX1-202ENST00000418336 PRO0461Q9UI25 63 aa10.29□□□□□ -0.76
PKNOX1-202ENST00000418336 Q6ZVQ6 151 aa10.28□□□□□ -0.76
PKNOX1-202ENST00000418336 PCP4L1A6NKN8 68 aa10.26□□□□□ -0.77
PKNOX1-202ENST00000418336 K7EQZ3 153 aa10.26□□□□□ -0.77
PKNOX1-202ENST00000418336 COL5A1-AS1Q5SY13 56 aa10.26□□□□□ -0.77
PKNOX1-202ENST00000418336 SPINK7P58062 85 aa10.24□□□□□ -0.77
PKNOX1-202ENST00000418336 TMEM254Q8TBM7 123 aa10.21□□□□□ -0.77
PKNOX1-202ENST00000418336 RBM12B-AS1Q9P1G2 102 aa10.21□□□□□ -0.77
PKNOX1-202ENST00000418336 K7EP34 96 aa10.2□□□□□ -0.78
PKNOX1-202ENST00000418336 MRPL34Q9BQ48 92 aaKnown RBP10.2□□□□□ -0.78
PKNOX1-202ENST00000418336 USH2AO75445 5202 aa10.17□□□□□ -0.78
PKNOX1-202ENST00000418336 FAM236DA0A1B0GTK5 79 aa10.17□□□□□ -0.78
PKNOX1-202ENST00000418336 FAM236CP0DP71 79 aa10.17□□□□□ -0.78
PKNOX1-202ENST00000418336 BPY2O14599 106 aa10.15□□□□□ -0.78
PKNOX1-202ENST00000418336 hDV103S1A0JD37 113 aa10.14□□□□□ -0.79
PKNOX1-202ENST00000418336 MT2AP02795 61 aa10.14□□□□□ -0.79
PKNOX1-202ENST00000418336 Q8N9L7 120 aa10.12□□□□□ -0.79
PKNOX1-202ENST00000418336 LINC00846Q9NV44 126 aa10.11□□□□□ -0.79
PKNOX1-202ENST00000418336 SSPOA2VEC9 5147 aa10.1□□□□□ -0.79
PKNOX1-202ENST00000418336 MT1FP04733 61 aa10.07□□□□□ -0.8
PKNOX1-202ENST00000418336 Q5W150 140 aa10.07□□□□□ -0.8
PKNOX1-202ENST00000418336 WFDC13Q8IUB5 93 aa10.07□□□□□ -0.8
PKNOX1-202ENST00000418336 CASC2Q6XLA1 102 aa10□□□□□ -0.81
PKNOX1-202ENST00000418336 NDUFS5O43920 106 aa9.99□□□□□ -0.81
PKNOX1-202ENST00000418336 GTF2H5Q6ZYL4 71 aa9.98□□□□□ -0.81
PKNOX1-202ENST00000418336 KRTAP9-3Q9BYQ3 159 aa9.98□□□□□ -0.81
PKNOX1-202ENST00000418336 F8W1H4 67 aa9.97□□□□□ -0.81
PKNOX1-202ENST00000418336 UBL5Q9BZL1 73 aa9.97□□□□□ -0.81
PKNOX1-202ENST00000418336 ETDBQ3ZM63 59 aa9.95□□□□□ -0.82
PKNOX1-202ENST00000418336 HCG22E2RYF7 251 aa9.94□□□□□ -0.82
PKNOX1-202ENST00000418336 LCE2BO14633 110 aa9.93□□□□□ -0.82
PKNOX1-202ENST00000418336 IGKV2D-30A0A075B6S6 120 aa9.89□□□□□ -0.83
PKNOX1-202ENST00000418336 IGKV2-30P06310 120 aa9.89□□□□□ -0.83
PKNOX1-202ENST00000418336 C7orf65Q6ZTY9 151 aa9.89□□□□□ -0.83
PKNOX1-202ENST00000418336 CXCL6P80162 114 aa9.88□□□□□ -0.83
PKNOX1-202ENST00000418336 KRTAP10-10P60014 251 aa9.87□□□□□ -0.83
PKNOX1-202ENST00000418336 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
PKNOX1-202ENST00000418336 FCGBPQ9Y6R7 5405 aaPredicted RBP9.78□□□□□ -0.84
PKNOX1-202ENST00000418336 KRTAP3-1Q9BYR8 98 aa9.77□□□□□ -0.85
PKNOX1-202ENST00000418336 C4orf26Q17RF5 130 aa9.76□□□□□ -0.85
PKNOX1-202ENST00000418336 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.69□□□□□ -0.86
PKNOX1-202ENST00000418336 TP53AIP1Q9HCN2 124 aa9.69□□□□□ -0.86
PKNOX1-202ENST00000418336 A0A1B0GV90 55 aa9.68□□□□□ -0.86
PKNOX1-202ENST00000418336 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
PKNOX1-202ENST00000418336 ACYP1P07311 99 aa9.67□□□□□ -0.86
PKNOX1-202ENST00000418336 KRTAP19-1Q8IUB9 90 aa9.67□□□□□ -0.86
PKNOX1-202ENST00000418336 KRTAP9-7A8MTY7 169 aa9.64□□□□□ -0.87
PKNOX1-202ENST00000418336 ATP5EP2Q5VTU8 51 aa9.58□□□□□ -0.88
PKNOX1-202ENST00000418336 C1orf64Q8NEQ6 169 aa9.57□□□□□ -0.88
PKNOX1-202ENST00000418336 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
PKNOX1-202ENST00000418336 KRTAP19-6Q3LI70 58 aa9.53□□□□□ -0.88
PKNOX1-202ENST00000418336 TRAV22A0A0B4J277 110 aa9.51□□□□□ -0.89
PKNOX1-202ENST00000418336 C5orf47Q569G3 176 aa9.51□□□□□ -0.89
PKNOX1-202ENST00000418336 LCA10Q71F78 164 aa9.51□□□□□ -0.89
PKNOX1-202ENST00000418336 S4R3F8 94 aa9.5□□□□□ -0.89
PKNOX1-202ENST00000418336 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
PKNOX1-202ENST00000418336 MACF1Q9UPN3 7388 aaKnown RBP9.47□□□□□ -0.89
PKNOX1-202ENST00000418336 A0A087WVE0 104 aa9.47□□□□□ -0.89
PKNOX1-202ENST00000418336 HIST1H4AP62805 103 aaKnown RBP9.46□□□□□ -0.9
PKNOX1-202ENST00000418336 LINC00643Q86TS7 51 aa9.46□□□□□ -0.9
PKNOX1-202ENST00000418336 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
PKNOX1-202ENST00000418336 UQCRQO14949 82 aa9.42□□□□□ -0.9
PKNOX1-202ENST00000418336 CSAG1Q6PB30 78 aa9.4□□□□□ -0.9
PKNOX1-202ENST00000418336 SYNE2Q8WXH0 6885 aaKnown RBP9.38□□□□□ -0.91
PKNOX1-202ENST00000418336 H0Y9P7 68 aa9.36□□□□□ -0.91
PKNOX1-202ENST00000418336 ATOX1O00244 68 aa9.33□□□□□ -0.92
PKNOX1-202ENST00000418336 OCR1Q9BZK8 76 aa9.33□□□□□ -0.92
PKNOX1-202ENST00000418336 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms