RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 TRANK1O15050 2925 aa2.69□□□□□ -1.98
XIST-202ENST00000417942 SRRM2Q9UQ35 2752 aaKnown RBP2.69□□□□□ -1.98
XIST-202ENST00000417942 LRBAP50851 2863 aa2.69□□□□□ -1.98
XIST-202ENST00000417942 KALRNO60229 2985 aa2.69□□□□□ -1.98
XIST-202ENST00000417942 C5orf42Q9H799 3197 aa2.69□□□□□ -1.98
XIST-202ENST00000417942 C2CD3Q4AC94 2353 aa2.68□□□□□ -1.98
XIST-202ENST00000417942 CHD9Q3L8U1 2897 aa2.67□□□□□ -1.98
XIST-202ENST00000417942 COL6A5A8TX70 2615 aa2.67□□□□□ -1.98
XIST-202ENST00000417942 NCOR1O75376 2440 aa2.67□□□□□ -1.98
XIST-202ENST00000417942 DMXL1Q9Y485 3027 aa2.64□□□□□ -1.99
XIST-202ENST00000417942 DNAH11Q96DT5 4516 aa2.64□□□□□ -1.99
XIST-202ENST00000417942 ABCA2Q9BZC7 2435 aa2.63□□□□□ -1.99
XIST-202ENST00000417942 MEGF8Q7Z7M0 2845 aa2.63□□□□□ -1.99
XIST-202ENST00000417942 FAM186AA6NE01 2351 aa2.63□□□□□ -1.99
XIST-202ENST00000417942 CCDC168Q8NDH2 2452 aa2.63□□□□□ -1.99
XIST-202ENST00000417942 F8P00451 2351 aa2.63□□□□□ -1.99
XIST-202ENST00000417942 COL12A1Q99715 3063 aa2.62□□□□□ -1.99
XIST-202ENST00000417942 SPEGQ15772 3267 aa2.62□□□□□ -1.99
XIST-202ENST00000417942 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
XIST-202ENST00000417942 EP300Q09472 2414 aaPredicted RBP2.62□□□□□ -1.99
XIST-202ENST00000417942 ZFHX4Q86UP3 3567 aa2.6□□□□□ -1.99
XIST-202ENST00000417942 DMDP11532 3685 aa2.6□□□□□ -1.99
XIST-202ENST00000417942 MYCBP2O75592 4640 aa2.59□□□□□ -1.99
XIST-202ENST00000417942 DCHS1Q96JQ0 3298 aa2.59□□□□□ -1.99
XIST-202ENST00000417942 NF1P21359 2839 aa2.58□□□□□ -2
XIST-202ENST00000417942 UNC80Q8N2C7 3258 aa2.58□□□□□ -2
XIST-202ENST00000417942 FRYQ5TBA9 3013 aa2.57□□□□□ -2
XIST-202ENST00000417942 NCOR2Q9Y618 2525 aa2.57□□□□□ -2
XIST-202ENST00000417942 CELSR3Q9NYQ7 3312 aa2.56□□□□□ -2
XIST-202ENST00000417942 CEP290O15078 2479 aa2.56□□□□□ -2
XIST-202ENST00000417942 ATMQ13315 3056 aa2.55□□□□□ -2
XIST-202ENST00000417942 RELNP78509 3460 aa2.55□□□□□ -2
XIST-202ENST00000417942 HIVEP3Q5T1R4 2406 aa2.55□□□□□ -2
XIST-202ENST00000417942 LAMA2P24043 3122 aaKnown RBP2.55□□□□□ -2
XIST-202ENST00000417942 NAV2Q8IVL1 2488 aa2.54□□□□□ -2
XIST-202ENST00000417942 DNAH12Q6ZR08 3092 aa2.54□□□□□ -2
XIST-202ENST00000417942 PKD1L2Q7Z442 2459 aa2.53□□□□□ -2
XIST-202ENST00000417942 CREBBPQ92793 2442 aa2.52□□□□□ -2.01
XIST-202ENST00000417942 SETD2Q9BYW2 2564 aaPredicted RBP2.52□□□□□ -2.01
XIST-202ENST00000417942 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
XIST-202ENST00000417942 RP1L1Q8IWN7 2480 aaPredicted RBP2.52□□□□□ -2.01
XIST-202ENST00000417942 USP34Q70CQ2 3546 aa2.52□□□□□ -2.01
XIST-202ENST00000417942 DMBT1Q9UGM3 2413 aaPredicted RBP2.51□□□□□ -2.01
XIST-202ENST00000417942 SPG11Q96JI7 2443 aa2.51□□□□□ -2.01
XIST-202ENST00000417942 LAMA1P25391 3075 aa2.5□□□□□ -2.01
XIST-202ENST00000417942 FREM2Q5SZK8 3169 aa2.5□□□□□ -2.01
XIST-202ENST00000417942 TTC28Q96AY4 2481 aa2.49□□□□□ -2.01
XIST-202ENST00000417942 DNAH8Q96JB1 4490 aa2.49□□□□□ -2.01
XIST-202ENST00000417942 FRAS1Q86XX4 4008 aa2.49□□□□□ -2.01
XIST-202ENST00000417942 PTPN13Q12923 2485 aa2.49□□□□□ -2.01
XIST-202ENST00000417942 NBASA2RRP1 2371 aa2.49□□□□□ -2.01
XIST-202ENST00000417942 RPS29P62273 56 aaKnown RBP2.48□□□□□ -2.01
XIST-202ENST00000417942 ANKHD1Q8IWZ3 2542 aaKnown RBP2.48□□□□□ -2.01
XIST-202ENST00000417942 DMXL2Q8TDJ6 3036 aa2.48□□□□□ -2.01
XIST-202ENST00000417942 XIRP2A4UGR9 3374 aa2.48□□□□□ -2.01
XIST-202ENST00000417942 EP400Q96L91 3159 aa2.47□□□□□ -2.01
XIST-202ENST00000417942 HTN3P15516 51 aa2.47□□□□□ -2.01
XIST-202ENST00000417942 RIF1Q5UIP0 2472 aaKnown RBP2.47□□□□□ -2.01
XIST-202ENST00000417942 DCHS2Q6V1P9 2916 aa2.46□□□□□ -2.02
XIST-202ENST00000417942 TNP1P09430 55 aa2.45□□□□□ -2.02
XIST-202ENST00000417942 ITPR3Q14573 2671 aa2.45□□□□□ -2.02
XIST-202ENST00000417942 ABCA12Q86UK0 2595 aa2.45□□□□□ -2.02
XIST-202ENST00000417942 NIPBLQ6KC79 2804 aaeCLIP2.44□□□□□ -2.02
XIST-202ENST00000417942 LAMA5O15230 3695 aa2.44□□□□□ -2.02
XIST-202ENST00000417942 COL7A1Q02388 2944 aa2.44□□□□□ -2.02
XIST-202ENST00000417942 DEFB4AO15263 64 aa2.42□□□□□ -2.02
XIST-202ENST00000417942 DEFB135Q30KP9 77 aa2.42□□□□□ -2.02
XIST-202ENST00000417942 APCP25054 2843 aa2.42□□□□□ -2.02
XIST-202ENST00000417942 LOC400499M0QZD8 3231 aa2.41□□□□□ -2.02
XIST-202ENST00000417942 PDZD2O15018 2839 aa2.41□□□□□ -2.02
XIST-202ENST00000417942 SACSQ9NZJ4 4579 aa2.41□□□□□ -2.02
XIST-202ENST00000417942 BSNQ9UPA5 3926 aa2.39□□□□□ -2.03
XIST-202ENST00000417942 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
XIST-202ENST00000417942 SPENQ96T58 3664 aaKnown RBP2.39□□□□□ -2.03
XIST-202ENST00000417942 SONP18583 2426 aaKnown RBP2.38□□□□□ -2.03
XIST-202ENST00000417942 DNAH1Q9P2D7 4330 aa2.38□□□□□ -2.03
XIST-202ENST00000417942 USP9YO00507 2555 aaPredicted RBP2.38□□□□□ -2.03
XIST-202ENST00000417942 CSMD1Q96PZ7 3565 aa2.38□□□□□ -2.03
XIST-202ENST00000417942 SMR3AQ99954 134 aa2.37□□□□□ -2.03
XIST-202ENST00000417942 ZNF292O60281 2723 aa2.37□□□□□ -2.03
XIST-202ENST00000417942 TACC2O95359 2948 aa2.37□□□□□ -2.03
XIST-202ENST00000417942 TEX15Q9BXT5 2789 aa2.36□□□□□ -2.03
XIST-202ENST00000417942 TRRAPQ9Y4A5 3859 aa2.36□□□□□ -2.03
XIST-202ENST00000417942 LAMA3Q16787 3333 aa2.35□□□□□ -2.03
XIST-202ENST00000417942 C9orf92A6NGG3 77 aa2.35□□□□□ -2.03
XIST-202ENST00000417942 SMG1Q96Q15 3661 aaKnown RBP2.35□□□□□ -2.03
XIST-202ENST00000417942 LRRK2Q5S007 2527 aa2.35□□□□□ -2.03
XIST-202ENST00000417942 HECTD1Q9ULT8 2610 aa2.35□□□□□ -2.03
XIST-202ENST00000417942 LYSTQ99698 3801 aa2.34□□□□□ -2.03
XIST-202ENST00000417942 DNAH3Q8TD57 4116 aa2.34□□□□□ -2.04
XIST-202ENST00000417942 UTP20O75691 2785 aaKnown RBP2.33□□□□□ -2.04
XIST-202ENST00000417942 KRTAP2-3P0C7H8 128 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 KRTAP2-4Q9BYR9 128 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 KRTAP2-1Q9BYU5 128 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 DNAH2Q9P225 4427 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 DNAH14Q0VDD8 3507 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 PIEZO1Q92508 2521 aa2.32□□□□□ -2.04
XIST-202ENST00000417942 HELZ2Q9BYK8 2649 aaKnown RBP2.32□□□□□ -2.04
XIST-202ENST00000417942 MUC3AQ02505 3323 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms