RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 J3KT08 172 aa9.25□□□□□ -0.93
VPS16-204ENST00000417508 C9JAW5 83 aa9.24□□□□□ -0.93
VPS16-204ENST00000417508 BAALC-AS2P0C853 105 aa9.24□□□□□ -0.93
VPS16-204ENST00000417508 HRES1P13985 223 aa9.23□□□□□ -0.93
VPS16-204ENST00000417508 A0A1B0GW54 56 aa9.18□□□□□ -0.94
VPS16-204ENST00000417508 Q6ZQT0 140 aa9.18□□□□□ -0.94
VPS16-204ENST00000417508 MTURNQ8N3F0 131 aa9.18□□□□□ -0.94
VPS16-204ENST00000417508 NDUFB1O75438 58 aa9.17□□□□□ -0.94
VPS16-204ENST00000417508 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
VPS16-204ENST00000417508 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
VPS16-204ENST00000417508 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
VPS16-204ENST00000417508 MT2AP02795 61 aa9.13□□□□□ -0.95
VPS16-204ENST00000417508 PDE6GP18545 87 aa9.13□□□□□ -0.95
VPS16-204ENST00000417508 ATXN8Q156A1 80 aa9.13□□□□□ -0.95
VPS16-204ENST00000417508 M0R143 59 aa9.12□□□□□ -0.95
VPS16-204ENST00000417508 Q8N9P0 234 aaPredicted RBP9.12□□□□□ -0.95
VPS16-204ENST00000417508 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
VPS16-204ENST00000417508 SPINK7P58062 85 aa9.1□□□□□ -0.95
VPS16-204ENST00000417508 A8MWP4 228 aa9.08□□□□□ -0.96
VPS16-204ENST00000417508 C8orf17Q9NRJ1 99 aa9.06□□□□□ -0.96
VPS16-204ENST00000417508 MT1FP04733 61 aa9.05□□□□□ -0.96
VPS16-204ENST00000417508 KRTAP10-10P60014 251 aa9.05□□□□□ -0.96
VPS16-204ENST00000417508 USH2AO75445 5202 aa9.05□□□□□ -0.96
VPS16-204ENST00000417508 LYRM7Q5U5X0 104 aa9.03□□□□□ -0.96
VPS16-204ENST00000417508 IGKV3D-7A0A0C4DH55 119 aa9.02□□□□□ -0.97
VPS16-204ENST00000417508 NAA38Q9BRA0 125 aaKnown RBP9.02□□□□□ -0.97
VPS16-204ENST00000417508 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
VPS16-204ENST00000417508 Q6ZVQ6 151 aa9□□□□□ -0.97
VPS16-204ENST00000417508 NREPQ16612 68 aa8.99□□□□□ -0.97
VPS16-204ENST00000417508 PRR15Q8IV56 129 aa8.99□□□□□ -0.97
VPS16-204ENST00000417508 C14orf132Q9NPU4 83 aa8.99□□□□□ -0.97
VPS16-204ENST00000417508 SSPOA2VEC9 5147 aa8.99□□□□□ -0.97
VPS16-204ENST00000417508 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.97□□□□□ -0.97
VPS16-204ENST00000417508 LCE2BO14633 110 aa8.97□□□□□ -0.97
VPS16-204ENST00000417508 WFDC13Q8IUB5 93 aa8.94□□□□□ -0.98
VPS16-204ENST00000417508 SMIM6P0DI80 62 aa8.93□□□□□ -0.98
VPS16-204ENST00000417508 TMEM254Q8TBM7 123 aa8.92□□□□□ -0.98
VPS16-204ENST00000417508 KRTAP9-7A8MTY7 169 aa8.91□□□□□ -0.98
VPS16-204ENST00000417508 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
VPS16-204ENST00000417508 MMP24-AS1A0A0U1RRL7 71 aa8.89□□□□□ -0.99
VPS16-204ENST00000417508 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
VPS16-204ENST00000417508 hDV103S1A0JD37 113 aa8.87□□□□□ -0.99
VPS16-204ENST00000417508 TSTD3H0UI37 97 aa8.87□□□□□ -0.99
VPS16-204ENST00000417508 H3BT86 120 aa8.86□□□□□ -0.99
VPS16-204ENST00000417508 BATFQ16520 125 aa8.84□□□□□ -0.99
VPS16-204ENST00000417508 LINC00846Q9NV44 126 aa8.84□□□□□ -0.99
VPS16-204ENST00000417508 FCGBPQ9Y6R7 5405 aaPredicted RBP8.83□□□□□ -1
VPS16-204ENST00000417508 C9orf118A6NHY6 69 aa8.82□□□□□ -1
VPS16-204ENST00000417508 K7EQZ3 153 aa8.82□□□□□ -1
VPS16-204ENST00000417508 NDUFS5O43920 106 aa8.82□□□□□ -1
VPS16-204ENST00000417508 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
VPS16-204ENST00000417508 BPY2O14599 106 aa8.8□□□□□ -1
VPS16-204ENST00000417508 A0A1W2PPM0 123 aa8.77□□□□□ -1.01
VPS16-204ENST00000417508 TAX1BP3O14907 124 aa8.75□□□□□ -1.01
VPS16-204ENST00000417508 KRTAP19-6Q3LI70 58 aa8.73□□□□□ -1.01
VPS16-204ENST00000417508 C7orf65Q6ZTY9 151 aa8.73□□□□□ -1.01
VPS16-204ENST00000417508 IGKV2D-30A0A075B6S6 120 aa8.72□□□□□ -1.01
VPS16-204ENST00000417508 IGKV2-30P06310 120 aa8.72□□□□□ -1.01
VPS16-204ENST00000417508 Q5W150 140 aa8.71□□□□□ -1.02
VPS16-204ENST00000417508 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
VPS16-204ENST00000417508 HCG22E2RYF7 251 aa8.66□□□□□ -1.02
VPS16-204ENST00000417508 CXCL6P80162 114 aa8.65□□□□□ -1.02
VPS16-204ENST00000417508 Q8N9L7 120 aa8.64□□□□□ -1.03
VPS16-204ENST00000417508 SPCS1Q9Y6A9 102 aa8.63□□□□□ -1.03
VPS16-204ENST00000417508 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
VPS16-204ENST00000417508 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
VPS16-204ENST00000417508 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
VPS16-204ENST00000417508 C4orf26Q17RF5 130 aa8.58□□□□□ -1.04
VPS16-204ENST00000417508 MACF1Q9UPN3 7388 aaKnown RBP8.55□□□□□ -1.04
VPS16-204ENST00000417508 COL5A1-AS1Q5SY13 56 aa8.51□□□□□ -1.05
VPS16-204ENST00000417508 PRO0461Q9UI25 63 aa8.5□□□□□ -1.05
VPS16-204ENST00000417508 SYNE2Q8WXH0 6885 aaKnown RBP8.47□□□□□ -1.05
VPS16-204ENST00000417508 TP53AIP1Q9HCN2 124 aa8.47□□□□□ -1.05
VPS16-204ENST00000417508 K7EP34 96 aa8.46□□□□□ -1.06
VPS16-204ENST00000417508 C5orf47Q569G3 176 aa8.46□□□□□ -1.06
VPS16-204ENST00000417508 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
VPS16-204ENST00000417508 KRTAP3-1Q9BYR8 98 aa8.45□□□□□ -1.06
VPS16-204ENST00000417508 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
VPS16-204ENST00000417508 S4R3F8 94 aa8.44□□□□□ -1.06
VPS16-204ENST00000417508 FAM236AA0A1B0GUQ0 79 aa8.42□□□□□ -1.06
VPS16-204ENST00000417508 FAM236BA0A1B0GV22 79 aa8.42□□□□□ -1.06
VPS16-204ENST00000417508 KRTAP6-3Q3LI67 103 aa8.4□□□□□ -1.06
VPS16-204ENST00000417508 GTF2H5Q6ZYL4 71 aa8.37□□□□□ -1.07
VPS16-204ENST00000417508 LCA10Q71F78 164 aa8.36□□□□□ -1.07
VPS16-204ENST00000417508 F8W1H4 67 aa8.35□□□□□ -1.07
VPS16-204ENST00000417508 SPRR2GQ9BYE4 73 aa8.32□□□□□ -1.08
VPS16-204ENST00000417508 Q5VV11 94 aa8.31□□□□□ -1.08
VPS16-204ENST00000417508 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
VPS16-204ENST00000417508 ETDBQ3ZM63 59 aa8.29□□□□□ -1.08
VPS16-204ENST00000417508 A6NN06 94 aa8.28□□□□□ -1.08
VPS16-204ENST00000417508 CYP4F30PQ9H0H9 118 aa8.28□□□□□ -1.08
VPS16-204ENST00000417508 MT1BP07438 61 aa8.27□□□□□ -1.09
VPS16-204ENST00000417508 KLKP1Q107X0 134 aa8.26□□□□□ -1.09
VPS16-204ENST00000417508 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
VPS16-204ENST00000417508 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
VPS16-204ENST00000417508 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
VPS16-204ENST00000417508 ACYP1P07311 99 aa8.2□□□□□ -1.1
VPS16-204ENST00000417508 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
VPS16-204ENST00000417508 KRTAP10-5P60370 271 aa8.15□□□□□ -1.1
VPS16-204ENST00000417508 IMUPQ9GZP8 106 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms