RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 Q6ZR54 194 aa8.4□□□□□ -1.06
CHEK2-210ENST00000416671 HRES1P13985 223 aa8.39□□□□□ -1.07
CHEK2-210ENST00000416671 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
CHEK2-210ENST00000416671 HECTD4Q9Y4D8 3996 aa8.39□□□□□ -1.07
CHEK2-210ENST00000416671 FRAS1Q86XX4 4008 aa8.37□□□□□ -1.07
CHEK2-210ENST00000416671 LY6G6CO95867 125 aa8.37□□□□□ -1.07
CHEK2-210ENST00000416671 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
CHEK2-210ENST00000416671 C8orf17Q9NRJ1 99 aa8.36□□□□□ -1.07
CHEK2-210ENST00000416671 Q96NJ1 140 aa8.35□□□□□ -1.07
CHEK2-210ENST00000416671 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
CHEK2-210ENST00000416671 A0A087WTM6 91 aa8.34□□□□□ -1.07
CHEK2-210ENST00000416671 HYDINQ4G0P3 5121 aa8.33□□□□□ -1.08
CHEK2-210ENST00000416671 IGHV6-1A0A0B4J1U7 121 aa8.3□□□□□ -1.08
CHEK2-210ENST00000416671 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
CHEK2-210ENST00000416671 A0A1B0GVX0 72 aa8.29□□□□□ -1.08
CHEK2-210ENST00000416671 RTL8CO15255 209 aa8.28□□□□□ -1.08
CHEK2-210ENST00000416671 MRPL34Q9BQ48 92 aaKnown RBP8.28□□□□□ -1.08
CHEK2-210ENST00000416671 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
CHEK2-210ENST00000416671 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
CHEK2-210ENST00000416671 DNAH8Q96JB1 4490 aa8.27□□□□□ -1.09
CHEK2-210ENST00000416671 CDK2AP2O75956 126 aa8.26□□□□□ -1.09
CHEK2-210ENST00000416671 DNAH17Q9UFH2 4485 aa8.26□□□□□ -1.09
CHEK2-210ENST00000416671 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
CHEK2-210ENST00000416671 LINC00313P59037 77 aa8.26□□□□□ -1.09
CHEK2-210ENST00000416671 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
CHEK2-210ENST00000416671 KRTAP13-1Q8IUC0 172 aa8.24□□□□□ -1.09
CHEK2-210ENST00000416671 C1orf134Q5TEV5 83 aa8.23□□□□□ -1.09
CHEK2-210ENST00000416671 C8orf87E5RJ46 101 aa8.23□□□□□ -1.09
CHEK2-210ENST00000416671 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
CHEK2-210ENST00000416671 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
CHEK2-210ENST00000416671 PRAC1Q96KF2 57 aa8.2□□□□□ -1.1
CHEK2-210ENST00000416671 A0A087X002 238 aa8.2□□□□□ -1.1
CHEK2-210ENST00000416671 ACYP2P14621 99 aa8.2□□□□□ -1.1
CHEK2-210ENST00000416671 NOTCH2NLQ7Z3S9 236 aa8.2□□□□□ -1.1
CHEK2-210ENST00000416671 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
CHEK2-210ENST00000416671 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
CHEK2-210ENST00000416671 ANAPC11Q9NYG5 84 aa8.19□□□□□ -1.1
CHEK2-210ENST00000416671 DNAH11Q96DT5 4516 aa8.18□□□□□ -1.1
CHEK2-210ENST00000416671 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
CHEK2-210ENST00000416671 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
CHEK2-210ENST00000416671 PLA2G1BP04054 148 aaKnown RBP8.16□□□□□ -1.1
CHEK2-210ENST00000416671 Q5W150 140 aa8.16□□□□□ -1.1
CHEK2-210ENST00000416671 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
CHEK2-210ENST00000416671 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
CHEK2-210ENST00000416671 KRTAP13-3Q3SY46 172 aa8.14□□□□□ -1.11
CHEK2-210ENST00000416671 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
CHEK2-210ENST00000416671 A0A1B0GU69 56 aa8.12□□□□□ -1.11
CHEK2-210ENST00000416671 PKD1P98161 4303 aa8.12□□□□□ -1.11
CHEK2-210ENST00000416671 ZNF706Q9Y5V0 76 aaPredicted RBP8.11□□□□□ -1.11
CHEK2-210ENST00000416671 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
CHEK2-210ENST00000416671 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
CHEK2-210ENST00000416671 ZNF861PO60384 105 aa8.1□□□□□ -1.11
CHEK2-210ENST00000416671 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
CHEK2-210ENST00000416671 SPINK6Q6UWN8 80 aa8.09□□□□□ -1.12
CHEK2-210ENST00000416671 KMT2CQ8NEZ4 4911 aaKnown RBP8.07□□□□□ -1.12
CHEK2-210ENST00000416671 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
CHEK2-210ENST00000416671 PKHD1P08F94 4074 aa8.04□□□□□ -1.12
CHEK2-210ENST00000416671 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
CHEK2-210ENST00000416671 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
CHEK2-210ENST00000416671 LRP1BQ9NZR2 4599 aa8.03□□□□□ -1.12
CHEK2-210ENST00000416671 UQCR11O14957 56 aa8.03□□□□□ -1.12
CHEK2-210ENST00000416671 RYR2Q92736 4967 aa8.01□□□□□ -1.13
CHEK2-210ENST00000416671 KRTAP10-1P60331 282 aa8□□□□□ -1.13
CHEK2-210ENST00000416671 FAM229AH3BQW9 127 aa7.97□□□□□ -1.13
CHEK2-210ENST00000416671 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.13
CHEK2-210ENST00000416671 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
CHEK2-210ENST00000416671 IGKV2-30P06310 120 aa7.95□□□□□ -1.14
CHEK2-210ENST00000416671 CSAG1Q6PB30 78 aa7.93□□□□□ -1.14
CHEK2-210ENST00000416671 Q6ZSA8 131 aa7.91□□□□□ -1.14
CHEK2-210ENST00000416671 H3BS24 57 aa7.91□□□□□ -1.14
CHEK2-210ENST00000416671 DYNC1H1Q14204 4646 aaKnown RBP7.91□□□□□ -1.14
CHEK2-210ENST00000416671 RYR3Q15413 4870 aa7.89□□□□□ -1.15
CHEK2-210ENST00000416671 KRTAP13-2Q52LG2 175 aa7.85□□□□□ -1.15
CHEK2-210ENST00000416671 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
CHEK2-210ENST00000416671 SSBP3-AS1Q7Z2R9 100 aa7.84□□□□□ -1.15
CHEK2-210ENST00000416671 IGKV2D-30A0A075B6S6 120 aa7.82□□□□□ -1.16
CHEK2-210ENST00000416671 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
CHEK2-210ENST00000416671 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
CHEK2-210ENST00000416671 SMR3BP02814 79 aaPredicted RBP7.78□□□□□ -1.16
CHEK2-210ENST00000416671 FAT1Q14517 4588 aa7.78□□□□□ -1.16
CHEK2-210ENST00000416671 KRTAP16-1A8MUX0 517 aa7.78□□□□□ -1.16
CHEK2-210ENST00000416671 SPINK1P00995 79 aa7.74□□□□□ -1.17
CHEK2-210ENST00000416671 TYMSOSQ8TAI1 123 aa7.69□□□□□ -1.18
CHEK2-210ENST00000416671 A8MUU9 505 aa7.67□□□□□ -1.18
CHEK2-210ENST00000416671 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
CHEK2-210ENST00000416671 Q8N1X5 172 aa7.65□□□□□ -1.18
CHEK2-210ENST00000416671 H0YAA0 97 aa7.65□□□□□ -1.18
CHEK2-210ENST00000416671 LINC00304Q8N9R0 145 aa7.63□□□□□ -1.19
CHEK2-210ENST00000416671 EPPK1P58107 5090 aaKnown RBP7.61□□□□□ -1.19
CHEK2-210ENST00000416671 HSPG2P98160 4391 aa7.61□□□□□ -1.19
CHEK2-210ENST00000416671 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
CHEK2-210ENST00000416671 ROMO1P60602 79 aa7.59□□□□□ -1.2
CHEK2-210ENST00000416671 A0A1B0GU33 70 aa7.56□□□□□ -1.2
CHEK2-210ENST00000416671 KIAA1109Q2LD37 5005 aa7.56□□□□□ -1.2
CHEK2-210ENST00000416671 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
CHEK2-210ENST00000416671 RYR1P21817 5038 aa7.54□□□□□ -1.2
CHEK2-210ENST00000416671 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
CHEK2-210ENST00000416671 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
CHEK2-210ENST00000416671 LRP1Q07954 4544 aaKnown RBP7.49□□□□□ -1.21
CHEK2-210ENST00000416671 Q5VSD8 79 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms