RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 Q6ZVQ6 151 aa4.01□□□□□ -1.77
HDAC8-211ENST00000415409 PRR15Q8IV56 129 aa4.01□□□□□ -1.77
HDAC8-211ENST00000415409 IGLV9-49A0A0B4J1Y8 123 aa4□□□□□ -1.77
HDAC8-211ENST00000415409 CXCL6P80162 114 aa3.99□□□□□ -1.77
HDAC8-211ENST00000415409 DYNC1H1Q14204 4646 aaKnown RBP3.99□□□□□ -1.77
HDAC8-211ENST00000415409 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
HDAC8-211ENST00000415409 HIST1H4AP62805 103 aaKnown RBP3.98□□□□□ -1.77
HDAC8-211ENST00000415409 A0A0G2JQZ4 141 aa3.97□□□□□ -1.77
HDAC8-211ENST00000415409 BPY2O14599 106 aa3.97□□□□□ -1.77
HDAC8-211ENST00000415409 COX7CP15954 63 aa3.97□□□□□ -1.77
HDAC8-211ENST00000415409 MOBPQ13875 183 aa3.97□□□□□ -1.77
HDAC8-211ENST00000415409 ANAPC11Q9NYG5 84 aa3.97□□□□□ -1.77
HDAC8-211ENST00000415409 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
HDAC8-211ENST00000415409 A0A087WSZ3 146 aa3.96□□□□□ -1.78
HDAC8-211ENST00000415409 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
HDAC8-211ENST00000415409 FAM229BQ4G0N7 80 aa3.96□□□□□ -1.78
HDAC8-211ENST00000415409 SSBP3-AS1Q7Z2R9 100 aa3.96□□□□□ -1.78
HDAC8-211ENST00000415409 SERP1Q9Y6X1 66 aa3.96□□□□□ -1.78
HDAC8-211ENST00000415409 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
HDAC8-211ENST00000415409 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
HDAC8-211ENST00000415409 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
HDAC8-211ENST00000415409 RBM12B-AS1Q9P1G2 102 aa3.95□□□□□ -1.78
HDAC8-211ENST00000415409 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
HDAC8-211ENST00000415409 SMR3BP02814 79 aaPredicted RBP3.94□□□□□ -1.78
HDAC8-211ENST00000415409 A0A087WVE0 104 aa3.93□□□□□ -1.78
HDAC8-211ENST00000415409 KTN1-AS1Q86SY8 53 aa3.93□□□□□ -1.78
HDAC8-211ENST00000415409 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
HDAC8-211ENST00000415409 HERC2O95714 4834 aa3.92□□□□□ -1.78
HDAC8-211ENST00000415409 ATOX1O00244 68 aa3.92□□□□□ -1.78
HDAC8-211ENST00000415409 NDUFS5O43920 106 aa3.91□□□□□ -1.78
HDAC8-211ENST00000415409 A0A087X002 238 aa3.9□□□□□ -1.79
HDAC8-211ENST00000415409 CDK2AP2O75956 126 aa3.9□□□□□ -1.79
HDAC8-211ENST00000415409 IGKV4-1P06312 121 aa3.9□□□□□ -1.79
HDAC8-211ENST00000415409 KRTAP1-4P0C5Y4 121 aa3.9□□□□□ -1.79
HDAC8-211ENST00000415409 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
HDAC8-211ENST00000415409 Q8N9L7 120 aa3.9□□□□□ -1.79
HDAC8-211ENST00000415409 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
HDAC8-211ENST00000415409 APOBP04114 4563 aaKnown RBP3.89□□□□□ -1.79
HDAC8-211ENST00000415409 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 NDUFB1O75438 58 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 DSCR10P59022 87 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 DEFB116Q30KQ4 102 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 TYMSOSQ8TAI1 123 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
HDAC8-211ENST00000415409 A8MWP4 228 aa3.88□□□□□ -1.79
HDAC8-211ENST00000415409 K7EQZ3 153 aa3.88□□□□□ -1.79
HDAC8-211ENST00000415409 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
HDAC8-211ENST00000415409 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
HDAC8-211ENST00000415409 PCLOQ9Y6V0 5065 aa3.86□□□□□ -1.79
HDAC8-211ENST00000415409 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
HDAC8-211ENST00000415409 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
HDAC8-211ENST00000415409 Q75L30 129 aa3.86□□□□□ -1.79
HDAC8-211ENST00000415409 SERP2Q8N6R1 65 aa3.86□□□□□ -1.79
HDAC8-211ENST00000415409 TRAV7A0A075B6U4 112 aa3.85□□□□□ -1.79
HDAC8-211ENST00000415409 SPINK1P00995 79 aa3.85□□□□□ -1.79
HDAC8-211ENST00000415409 Q5VSD8 79 aa3.85□□□□□ -1.79
HDAC8-211ENST00000415409 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
HDAC8-211ENST00000415409 Q96NJ1 140 aa3.85□□□□□ -1.79
HDAC8-211ENST00000415409 LINC00304Q8N9R0 145 aa3.84□□□□□ -1.79
HDAC8-211ENST00000415409 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
HDAC8-211ENST00000415409 KRTAP29-1A8MX34 341 aaPredicted RBP3.83□□□□□ -1.8
HDAC8-211ENST00000415409 CASC2Q6XLA1 102 aa3.83□□□□□ -1.8
HDAC8-211ENST00000415409 LCA10Q71F78 164 aa3.83□□□□□ -1.8
HDAC8-211ENST00000415409 FP248Q71RG6 208 aaPredicted RBP3.83□□□□□ -1.8
HDAC8-211ENST00000415409 RYR1P21817 5038 aa3.83□□□□□ -1.8
HDAC8-211ENST00000415409 FAT1Q14517 4588 aa3.83□□□□□ -1.8
HDAC8-211ENST00000415409 IGHV6-1A0A0B4J1U7 121 aa3.82□□□□□ -1.8
HDAC8-211ENST00000415409 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
HDAC8-211ENST00000415409 WFDC13Q8IUB5 93 aa3.82□□□□□ -1.8
HDAC8-211ENST00000415409 C8orf17Q9NRJ1 99 aa3.81□□□□□ -1.8
HDAC8-211ENST00000415409 MMP24-AS1A0A0U1RRL7 71 aa3.8□□□□□ -1.8
HDAC8-211ENST00000415409 hDV103S1A0JD37 113 aa3.8□□□□□ -1.8
HDAC8-211ENST00000415409 A8MUN3 132 aa3.8□□□□□ -1.8
HDAC8-211ENST00000415409 HSPG2P98160 4391 aa3.8□□□□□ -1.8
HDAC8-211ENST00000415409 PKHD1L1Q86WI1 4243 aa3.8□□□□□ -1.8
HDAC8-211ENST00000415409 MP68P56378 58 aa3.79□□□□□ -1.8
HDAC8-211ENST00000415409 OCR1Q9BZK8 76 aa3.79□□□□□ -1.8
HDAC8-211ENST00000415409 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
HDAC8-211ENST00000415409 C20orf197Q8N268 126 aa3.78□□□□□ -1.8
HDAC8-211ENST00000415409 TMEM254Q8TBM7 123 aa3.78□□□□□ -1.8
HDAC8-211ENST00000415409 LINC00313P59037 77 aa3.77□□□□□ -1.81
HDAC8-211ENST00000415409 C7orf65Q6ZTY9 151 aa3.77□□□□□ -1.81
HDAC8-211ENST00000415409 DMBT1Q9UGM3 2413 aaPredicted RBP3.76□□□□□ -1.81
HDAC8-211ENST00000415409 PSPHP1O15172 72 aa3.76□□□□□ -1.81
HDAC8-211ENST00000415409 NDUFC1O43677 76 aa3.76□□□□□ -1.81
HDAC8-211ENST00000415409 MRPL34Q9BQ48 92 aaKnown RBP3.76□□□□□ -1.81
HDAC8-211ENST00000415409 TP53AIP1Q9HCN2 124 aa3.76□□□□□ -1.81
HDAC8-211ENST00000415409 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
HDAC8-211ENST00000415409 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
HDAC8-211ENST00000415409 ABCA13Q86UQ4 5058 aa3.74□□□□□ -1.81
HDAC8-211ENST00000415409 KLKP1Q107X0 134 aa3.74□□□□□ -1.81
HDAC8-211ENST00000415409 CYSTM1Q9H1C7 97 aa3.74□□□□□ -1.81
HDAC8-211ENST00000415409 H0Y9P7 68 aa3.73□□□□□ -1.81
HDAC8-211ENST00000415409 H3BPC8 53 aa3.73□□□□□ -1.81
HDAC8-211ENST00000415409 SEC61BP60468 96 aaKnown RBP3.73□□□□□ -1.81
HDAC8-211ENST00000415409 SNURFQ9Y675 71 aa3.73□□□□□ -1.81
HDAC8-211ENST00000415409 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
HDAC8-211ENST00000415409 H7BZZ5 65 aa3.7□□□□□ -1.82
HDAC8-211ENST00000415409 LINC01554Q52M75 96 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms