RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 A0A087X002 238 aa11.27□□□□□ -0.6
TNFRSF8-202ENST00000413146 NOTCH2NLQ7Z3S9 236 aa11.27□□□□□ -0.6
TNFRSF8-202ENST00000413146 HECTD4Q9Y4D8 3996 aa11.27□□□□□ -0.61
TNFRSF8-202ENST00000413146 DNAH8Q96JB1 4490 aa11.26□□□□□ -0.61
TNFRSF8-202ENST00000413146 SPINK6Q6UWN8 80 aa11.24□□□□□ -0.61
TNFRSF8-202ENST00000413146 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
TNFRSF8-202ENST00000413146 IGLV7-43P04211 117 aa11.22□□□□□ -0.61
TNFRSF8-202ENST00000413146 DNAH17Q9UFH2 4485 aa11.21□□□□□ -0.61
TNFRSF8-202ENST00000413146 CIRBP-AS1Q8TBR5 109 aa11.2□□□□□ -0.62
TNFRSF8-202ENST00000413146 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
TNFRSF8-202ENST00000413146 LOC101927531A0A1B0GV80 90 aa11.2□□□□□ -0.62
TNFRSF8-202ENST00000413146 Q75L30 129 aa11.2□□□□□ -0.62
TNFRSF8-202ENST00000413146 C1orf134Q5TEV5 83 aa11.19□□□□□ -0.62
TNFRSF8-202ENST00000413146 MEGF8Q7Z7M0 2845 aa11.18□□□□□ -0.62
TNFRSF8-202ENST00000413146 A8MU10 97 aa11.18□□□□□ -0.62
TNFRSF8-202ENST00000413146 DNAH2Q9P225 4427 aa11.16□□□□□ -0.62
TNFRSF8-202ENST00000413146 HRES1P13985 223 aa11.16□□□□□ -0.62
TNFRSF8-202ENST00000413146 SPAG11AQ6PDA7 123 aa11.15□□□□□ -0.62
TNFRSF8-202ENST00000413146 KMT2AQ03164 3969 aa11.14□□□□□ -0.63
TNFRSF8-202ENST00000413146 A6NED7 52 aa11.13□□□□□ -0.63
TNFRSF8-202ENST00000413146 PMAIP1Q13794 54 aa11.13□□□□□ -0.63
TNFRSF8-202ENST00000413146 Q5W150 140 aa11.13□□□□□ -0.63
TNFRSF8-202ENST00000413146 LINC01558Q9Y6Z2 57 aa11.13□□□□□ -0.63
TNFRSF8-202ENST00000413146 FBN3Q75N90 2809 aa11.12□□□□□ -0.63
TNFRSF8-202ENST00000413146 SSBP3-AS1Q7Z2R9 100 aa11.11□□□□□ -0.63
TNFRSF8-202ENST00000413146 C8orf87E5RJ46 101 aa11.1□□□□□ -0.63
TNFRSF8-202ENST00000413146 KRTAP13-3Q3SY46 172 aa11.1□□□□□ -0.63
TNFRSF8-202ENST00000413146 LCA10Q71F78 164 aa11.06□□□□□ -0.64
TNFRSF8-202ENST00000413146 LY6G6CO95867 125 aa11.05□□□□□ -0.64
TNFRSF8-202ENST00000413146 SPTSSBQ8NFR3 76 aa11.03□□□□□ -0.64
TNFRSF8-202ENST00000413146 TGP01266 2768 aa11.03□□□□□ -0.64
TNFRSF8-202ENST00000413146 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
TNFRSF8-202ENST00000413146 LINC00313P59037 77 aa11.01□□□□□ -0.65
TNFRSF8-202ENST00000413146 CDC42SE1Q9NRR8 79 aa11.01□□□□□ -0.65
TNFRSF8-202ENST00000413146 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
TNFRSF8-202ENST00000413146 ALMS1Q8TCU4 4167 aa10.99□□□□□ -0.65
TNFRSF8-202ENST00000413146 ACYP2P14621 99 aa10.98□□□□□ -0.65
TNFRSF8-202ENST00000413146 KRTAP10-2P60368 255 aa10.98□□□□□ -0.65
TNFRSF8-202ENST00000413146 FAM229AH3BQW9 127 aa10.97□□□□□ -0.65
TNFRSF8-202ENST00000413146 KRTAP13-2Q52LG2 175 aa10.94□□□□□ -0.66
TNFRSF8-202ENST00000413146 DNAH11Q96DT5 4516 aa10.94□□□□□ -0.66
TNFRSF8-202ENST00000413146 RETNLBQ9BQ08 111 aa10.92□□□□□ -0.66
TNFRSF8-202ENST00000413146 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
TNFRSF8-202ENST00000413146 SPINK7P58062 85 aa10.92□□□□□ -0.66
TNFRSF8-202ENST00000413146 DMAC1Q96GE9 116 aa10.91□□□□□ -0.66
TNFRSF8-202ENST00000413146 DNAH5Q8TE73 4624 aa10.89□□□□□ -0.67
TNFRSF8-202ENST00000413146 IGKV2-30P06310 120 aa10.88□□□□□ -0.67
TNFRSF8-202ENST00000413146 KTN1-AS1Q86SY8 53 aa10.87□□□□□ -0.67
TNFRSF8-202ENST00000413146 Q6ZSA8 131 aa10.86□□□□□ -0.67
TNFRSF8-202ENST00000413146 KRTAP10-1P60331 282 aa10.85□□□□□ -0.67
TNFRSF8-202ENST00000413146 A6NN06 94 aa10.84□□□□□ -0.67
TNFRSF8-202ENST00000413146 KRTAP16-1A8MUX0 517 aa10.83□□□□□ -0.68
TNFRSF8-202ENST00000413146 KRTAP1-4P0C5Y4 121 aa10.8□□□□□ -0.68
TNFRSF8-202ENST00000413146 A0A0A0MQY5 61 aa10.79□□□□□ -0.68
TNFRSF8-202ENST00000413146 IGKV2D-30A0A075B6S6 120 aa10.74□□□□□ -0.69
TNFRSF8-202ENST00000413146 LRP1BQ9NZR2 4599 aa10.74□□□□□ -0.69
TNFRSF8-202ENST00000413146 A0A1B0GU69 56 aa10.74□□□□□ -0.69
TNFRSF8-202ENST00000413146 PKD1P98161 4303 aa10.71□□□□□ -0.69
TNFRSF8-202ENST00000413146 PLA2G1BP04054 148 aaKnown RBP10.71□□□□□ -0.69
TNFRSF8-202ENST00000413146 TYMSOSQ8TAI1 123 aa10.7□□□□□ -0.7
TNFRSF8-202ENST00000413146 C7orf65Q6ZTY9 151 aa10.68□□□□□ -0.7
TNFRSF8-202ENST00000413146 SPINK1P00995 79 aa10.67□□□□□ -0.7
TNFRSF8-202ENST00000413146 RBM12B-AS1Q9P1G2 102 aa10.66□□□□□ -0.7
TNFRSF8-202ENST00000413146 FAT2Q9NYQ8 4349 aa10.63□□□□□ -0.71
TNFRSF8-202ENST00000413146 VPS13BQ7Z7G8 4022 aa10.62□□□□□ -0.71
TNFRSF8-202ENST00000413146 HYDINQ4G0P3 5121 aa10.6□□□□□ -0.71
TNFRSF8-202ENST00000413146 SPATA8Q6RVD6 105 aa10.56□□□□□ -0.72
TNFRSF8-202ENST00000413146 UQCR11O14957 56 aa10.55□□□□□ -0.72
TNFRSF8-202ENST00000413146 LINC00304Q8N9R0 145 aa10.55□□□□□ -0.72
TNFRSF8-202ENST00000413146 MIR22HGQ0VDD5 57 aa10.52□□□□□ -0.73
TNFRSF8-202ENST00000413146 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.73
TNFRSF8-202ENST00000413146 Q8N1X5 172 aa10.48□□□□□ -0.73
TNFRSF8-202ENST00000413146 SACSQ9NZJ4 4579 aa10.42□□□□□ -0.74
TNFRSF8-202ENST00000413146 C9orf92A6NGG3 77 aa10.37□□□□□ -0.75
TNFRSF8-202ENST00000413146 SMR3BP02814 79 aaPredicted RBP10.37□□□□□ -0.75
TNFRSF8-202ENST00000413146 PKHD1P08F94 4074 aa10.36□□□□□ -0.75
TNFRSF8-202ENST00000413146 PRAC1Q96KF2 57 aa10.35□□□□□ -0.75
TNFRSF8-202ENST00000413146 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
TNFRSF8-202ENST00000413146 A8MUU9 505 aa10.33□□□□□ -0.76
TNFRSF8-202ENST00000413146 ADM2Q7Z4H4 148 aa10.31□□□□□ -0.76
TNFRSF8-202ENST00000413146 J3QL48 77 aa10.26□□□□□ -0.77
TNFRSF8-202ENST00000413146 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
TNFRSF8-202ENST00000413146 RYR2Q92736 4967 aa10.23□□□□□ -0.77
TNFRSF8-202ENST00000413146 DYNC1H1Q14204 4646 aaKnown RBP10.22□□□□□ -0.77
TNFRSF8-202ENST00000413146 KRTAP10-4P60372 401 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF8-202ENST00000413146 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
TNFRSF8-202ENST00000413146 PKHD1L1Q86WI1 4243 aa10.2□□□□□ -0.78
TNFRSF8-202ENST00000413146 APOBP04114 4563 aaKnown RBP10.15□□□□□ -0.78
TNFRSF8-202ENST00000413146 H0YAA0 97 aa10.15□□□□□ -0.79
TNFRSF8-202ENST00000413146 KMT2CQ8NEZ4 4911 aaKnown RBP10.14□□□□□ -0.79
TNFRSF8-202ENST00000413146 FAT1Q14517 4588 aa10.13□□□□□ -0.79
TNFRSF8-202ENST00000413146 A0A1B0GU33 70 aa10.11□□□□□ -0.79
TNFRSF8-202ENST00000413146 LINC01554Q52M75 96 aa10.07□□□□□ -0.8
TNFRSF8-202ENST00000413146 H1FX-AS1Q4G0G2 97 aa10.07□□□□□ -0.8
TNFRSF8-202ENST00000413146 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
TNFRSF8-202ENST00000413146 CSAG1Q6PB30 78 aa10.06□□□□□ -0.8
TNFRSF8-202ENST00000413146 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
TNFRSF8-202ENST00000413146 RYR3Q15413 4870 aa9.94□□□□□ -0.82
TNFRSF8-202ENST00000413146 K7ERS5 55 aa9.86□□□□□ -0.83
TNFRSF8-202ENST00000413146 FAT3Q8TDW7 4589 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms