RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 A0A1B0GVX0 72 aa11.24□□□□□ -0.61
PTPA-208ENST00000411917 PRR15Q8IV56 129 aa11.24□□□□□ -0.61
PTPA-208ENST00000411917 TPRXLQ17RH7 258 aa11.23□□□□□ -0.61
PTPA-208ENST00000411917 IGKV3D-7A0A0C4DH55 119 aa11.22□□□□□ -0.61
PTPA-208ENST00000411917 C8orf87E5RJ46 101 aa11.22□□□□□ -0.61
PTPA-208ENST00000411917 PRR4Q16378 134 aa11.22□□□□□ -0.61
PTPA-208ENST00000411917 HMCN2Q8NDA2 5059 aa11.19□□□□□ -0.62
PTPA-208ENST00000411917 K7EQZ3 153 aa11.18□□□□□ -0.62
PTPA-208ENST00000411917 KRTAP13-3Q3SY46 172 aa11.18□□□□□ -0.62
PTPA-208ENST00000411917 IGHV6-1A0A0B4J1U7 121 aa11.14□□□□□ -0.63
PTPA-208ENST00000411917 LINC00313P59037 77 aa11.14□□□□□ -0.63
PTPA-208ENST00000411917 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
PTPA-208ENST00000411917 C8orf17Q9NRJ1 99 aa11.12□□□□□ -0.63
PTPA-208ENST00000411917 MMP24-AS1A0A0U1RRL7 71 aa11.09□□□□□ -0.63
PTPA-208ENST00000411917 Q8N9L7 120 aa11.09□□□□□ -0.63
PTPA-208ENST00000411917 KRTAP16-1A8MUX0 517 aa11.06□□□□□ -0.64
PTPA-208ENST00000411917 NOTCH2NLQ7Z3S9 236 aa11.06□□□□□ -0.64
PTPA-208ENST00000411917 TMEM254Q8TBM7 123 aa11.05□□□□□ -0.64
PTPA-208ENST00000411917 HCG22E2RYF7 251 aa11.04□□□□□ -0.64
PTPA-208ENST00000411917 hDV103S1A0JD37 113 aa11.03□□□□□ -0.64
PTPA-208ENST00000411917 MT-ATP8P03928 68 aa11.03□□□□□ -0.64
PTPA-208ENST00000411917 XP32Q5T750 250 aa11.03□□□□□ -0.64
PTPA-208ENST00000411917 C9orf92A6NGG3 77 aa11.02□□□□□ -0.65
PTPA-208ENST00000411917 HIST1H4AP62805 103 aaKnown RBP11.02□□□□□ -0.65
PTPA-208ENST00000411917 C20orf166-AS1Q96NR2 134 aa11.02□□□□□ -0.65
PTPA-208ENST00000411917 CASC2Q6XLA1 102 aa11□□□□□ -0.65
PTPA-208ENST00000411917 Q75L30 129 aa11□□□□□ -0.65
PTPA-208ENST00000411917 Q8N9P0 234 aaPredicted RBP11□□□□□ -0.65
PTPA-208ENST00000411917 A8MUU9 505 aa10.99□□□□□ -0.65
PTPA-208ENST00000411917 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
PTPA-208ENST00000411917 LPAP08519 4548 aa10.96□□□□□ -0.66
PTPA-208ENST00000411917 A0A087WVE0 104 aa10.93□□□□□ -0.66
PTPA-208ENST00000411917 RPL37P61927 97 aaKnown RBP10.93□□□□□ -0.66
PTPA-208ENST00000411917 WFDC13Q8IUB5 93 aa10.92□□□□□ -0.66
PTPA-208ENST00000411917 LRP2P98164 4655 aa10.91□□□□□ -0.66
PTPA-208ENST00000411917 TP53AIP1Q9HCN2 124 aa10.86□□□□□ -0.67
PTPA-208ENST00000411917 MUC17Q685J3 4493 aa10.84□□□□□ -0.67
PTPA-208ENST00000411917 SEC61BP60468 96 aaKnown RBP10.82□□□□□ -0.68
PTPA-208ENST00000411917 ATP11AUNQ6ZP68 121 aa10.8□□□□□ -0.68
PTPA-208ENST00000411917 FAM236AA0A1B0GUQ0 79 aa10.78□□□□□ -0.68
PTPA-208ENST00000411917 FAM236BA0A1B0GV22 79 aa10.78□□□□□ -0.68
PTPA-208ENST00000411917 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
PTPA-208ENST00000411917 NDUFS5O43920 106 aa10.77□□□□□ -0.69
PTPA-208ENST00000411917 SMIM20Q8N5G0 67 aa10.76□□□□□ -0.69
PTPA-208ENST00000411917 UQCRQO14949 82 aa10.74□□□□□ -0.69
PTPA-208ENST00000411917 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
PTPA-208ENST00000411917 OCR1Q9BZK8 76 aa10.74□□□□□ -0.69
PTPA-208ENST00000411917 ATOX1O00244 68 aa10.73□□□□□ -0.69
PTPA-208ENST00000411917 UBR4Q5T4S7 5183 aa10.69□□□□□ -0.7
PTPA-208ENST00000411917 PCOTHQ58A44 107 aa10.69□□□□□ -0.7
PTPA-208ENST00000411917 TRAV22A0A0B4J277 110 aa10.65□□□□□ -0.7
PTPA-208ENST00000411917 Q5W150 140 aa10.65□□□□□ -0.7
PTPA-208ENST00000411917 TRAV7A0A075B6U4 112 aa10.64□□□□□ -0.71
PTPA-208ENST00000411917 C5orf47Q569G3 176 aa10.63□□□□□ -0.71
PTPA-208ENST00000411917 H3BPC8 53 aa10.59□□□□□ -0.71
PTPA-208ENST00000411917 MP68P56378 58 aa10.56□□□□□ -0.72
PTPA-208ENST00000411917 SERP2Q8N6R1 65 aa10.56□□□□□ -0.72
PTPA-208ENST00000411917 H0Y9P7 68 aa10.55□□□□□ -0.72
PTPA-208ENST00000411917 RNF213Q63HN8 5207 aa10.54□□□□□ -0.72
PTPA-208ENST00000411917 LOC101927531A0A1B0GV80 90 aa10.54□□□□□ -0.72
PTPA-208ENST00000411917 IGKV2-30P06310 120 aa10.53□□□□□ -0.72
PTPA-208ENST00000411917 C7orf65Q6ZTY9 151 aa10.53□□□□□ -0.72
PTPA-208ENST00000411917 SPINK7P58062 85 aa10.51□□□□□ -0.73
PTPA-208ENST00000411917 KRTAP4-1Q9BYQ7 146 aa10.47□□□□□ -0.73
PTPA-208ENST00000411917 C1orf64Q8NEQ6 169 aa10.45□□□□□ -0.74
PTPA-208ENST00000411917 CYP4F30PQ9H0H9 118 aa10.45□□□□□ -0.74
PTPA-208ENST00000411917 MUC2Q02817 5179 aa10.45□□□□□ -0.74
PTPA-208ENST00000411917 IGKV2D-30A0A075B6S6 120 aa10.43□□□□□ -0.74
PTPA-208ENST00000411917 COX7CP15954 63 aa10.43□□□□□ -0.74
PTPA-208ENST00000411917 LINC00208Q96KT6 92 aa10.43□□□□□ -0.74
PTPA-208ENST00000411917 ANAPC13Q9BS18 74 aa10.42□□□□□ -0.74
PTPA-208ENST00000411917 A0A0U1RQV1 116 aa10.4□□□□□ -0.74
PTPA-208ENST00000411917 HRES1P13985 223 aa10.4□□□□□ -0.74
PTPA-208ENST00000411917 MPLKIPQ8TAP9 179 aa10.4□□□□□ -0.74
PTPA-208ENST00000411917 KLKP1Q107X0 134 aa10.36□□□□□ -0.75
PTPA-208ENST00000411917 C20orf197Q8N268 126 aa10.32□□□□□ -0.76
PTPA-208ENST00000411917 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
PTPA-208ENST00000411917 NDUFC1O43677 76 aa10.24□□□□□ -0.77
PTPA-208ENST00000411917 KRTAP19-2Q3LHN2 52 aa10.24□□□□□ -0.77
PTPA-208ENST00000411917 COX6B2Q6YFQ2 88 aa10.23□□□□□ -0.77
PTPA-208ENST00000411917 SNURFQ9Y675 71 aa10.23□□□□□ -0.77
PTPA-208ENST00000411917 C4orf26Q17RF5 130 aa10.18□□□□□ -0.78
PTPA-208ENST00000411917 A8MUN3 132 aa10.17□□□□□ -0.78
PTPA-208ENST00000411917 SPANXA2-OT1Q8N9U9 137 aa10.17□□□□□ -0.78
PTPA-208ENST00000411917 CCDC179H3BU77 68 aa10.15□□□□□ -0.78
PTPA-208ENST00000411917 FAT4Q6V0I7 4981 aa10.12□□□□□ -0.79
PTPA-208ENST00000411917 LCE2CQ5TA81 110 aa10.12□□□□□ -0.79
PTPA-208ENST00000411917 FAM236DA0A1B0GTK5 79 aa10.11□□□□□ -0.79
PTPA-208ENST00000411917 H7BZZ5 65 aa10.11□□□□□ -0.79
PTPA-208ENST00000411917 FAM236CP0DP71 79 aa10.11□□□□□ -0.79
PTPA-208ENST00000411917 FLGP20930 4061 aaPredicted RBP10.11□□□□□ -0.79
PTPA-208ENST00000411917 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
PTPA-208ENST00000411917 H1FX-AS1Q4G0G2 97 aa10.09□□□□□ -0.79
PTPA-208ENST00000411917 DMAC1Q96GE9 116 aa10.08□□□□□ -0.8
PTPA-208ENST00000411917 CYSTM1Q9H1C7 97 aa10.06□□□□□ -0.8
PTPA-208ENST00000411917 PCP4P48539 62 aa10□□□□□ -0.81
PTPA-208ENST00000411917 ACYP2P14621 99 aa9.95□□□□□ -0.82
PTPA-208ENST00000411917 ATP5EP56381 51 aaPredicted RBP9.95□□□□□ -0.82
PTPA-208ENST00000411917 TMEM258P61165 79 aa9.93□□□□□ -0.82
PTPA-208ENST00000411917 MT1HP80294 61 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms