RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 HRES1P13985 223 aa7.38□□□□□ -1.23
CBX3-203ENST00000409747 MPLKIPQ8TAP9 179 aa7.38□□□□□ -1.23
CBX3-203ENST00000409747 J3KT08 172 aa7.37□□□□□ -1.23
CBX3-203ENST00000409747 MTURNQ8N3F0 131 aa7.35□□□□□ -1.23
CBX3-203ENST00000409747 C9JAW5 83 aa7.34□□□□□ -1.23
CBX3-203ENST00000409747 MT2AP02795 61 aa7.33□□□□□ -1.24
CBX3-203ENST00000409747 USH2AO75445 5202 aa7.33□□□□□ -1.24
CBX3-203ENST00000409747 BAALC-AS2P0C853 105 aa7.32□□□□□ -1.24
CBX3-203ENST00000409747 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
CBX3-203ENST00000409747 NDUFB1O75438 58 aa7.31□□□□□ -1.24
CBX3-203ENST00000409747 Q6ZQT0 140 aa7.3□□□□□ -1.24
CBX3-203ENST00000409747 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
CBX3-203ENST00000409747 LCE2BO14633 110 aa7.29□□□□□ -1.24
CBX3-203ENST00000409747 A0A1B0GW54 56 aa7.28□□□□□ -1.24
CBX3-203ENST00000409747 JMJD7-PLA2G4BH0Y9G9 81 aa7.27□□□□□ -1.25
CBX3-203ENST00000409747 MT1FP04733 61 aa7.27□□□□□ -1.25
CBX3-203ENST00000409747 SPINK7P58062 85 aa7.27□□□□□ -1.25
CBX3-203ENST00000409747 TMA7Q9Y2S6 64 aaKnown RBP7.27□□□□□ -1.25
CBX3-203ENST00000409747 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
CBX3-203ENST00000409747 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
CBX3-203ENST00000409747 Q8N9P0 234 aaPredicted RBP7.26□□□□□ -1.25
CBX3-203ENST00000409747 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
CBX3-203ENST00000409747 A8MWP4 228 aa7.24□□□□□ -1.25
CBX3-203ENST00000409747 LOC110117498A0A087WWA1 95 aa7.24□□□□□ -1.25
CBX3-203ENST00000409747 M0R143 59 aa7.24□□□□□ -1.25
CBX3-203ENST00000409747 PDE6GP18545 87 aa7.24□□□□□ -1.25
CBX3-203ENST00000409747 LYRM7Q5U5X0 104 aa7.23□□□□□ -1.25
CBX3-203ENST00000409747 C8orf17Q9NRJ1 99 aa7.22□□□□□ -1.25
CBX3-203ENST00000409747 KRTAP9-7A8MTY7 169 aa7.21□□□□□ -1.26
CBX3-203ENST00000409747 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
CBX3-203ENST00000409747 WFDC13Q8IUB5 93 aa7.18□□□□□ -1.26
CBX3-203ENST00000409747 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
CBX3-203ENST00000409747 Q6ZVQ6 151 aa7.18□□□□□ -1.26
CBX3-203ENST00000409747 NAA38Q9BRA0 125 aaKnown RBP7.17□□□□□ -1.26
CBX3-203ENST00000409747 C14orf132Q9NPU4 83 aa7.16□□□□□ -1.26
CBX3-203ENST00000409747 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.27
CBX3-203ENST00000409747 NREPQ16612 68 aa7.15□□□□□ -1.27
CBX3-203ENST00000409747 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.27
CBX3-203ENST00000409747 PRR15Q8IV56 129 aa7.15□□□□□ -1.27
CBX3-203ENST00000409747 SMCPP49901 116 aaPredicted RBP7.14□□□□□ -1.27
CBX3-203ENST00000409747 TMEM254Q8TBM7 123 aa7.12□□□□□ -1.27
CBX3-203ENST00000409747 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
CBX3-203ENST00000409747 LINC00846Q9NV44 126 aa7.1□□□□□ -1.27
CBX3-203ENST00000409747 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
CBX3-203ENST00000409747 SMIM6P0DI80 62 aa7.07□□□□□ -1.28
CBX3-203ENST00000409747 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
CBX3-203ENST00000409747 NDUFS5O43920 106 aa7.06□□□□□ -1.28
CBX3-203ENST00000409747 K7EQZ3 153 aa7.04□□□□□ -1.28
CBX3-203ENST00000409747 H3BT86 120 aa7.04□□□□□ -1.28
CBX3-203ENST00000409747 H1FX-AS1Q4G0G2 97 aa7.04□□□□□ -1.28
CBX3-203ENST00000409747 TSTD3H0UI37 97 aa7.03□□□□□ -1.28
CBX3-203ENST00000409747 BATFQ16520 125 aa7.02□□□□□ -1.29
CBX3-203ENST00000409747 BPY2O14599 106 aa7.01□□□□□ -1.29
CBX3-203ENST00000409747 KRTAP19-6Q3LI70 58 aa7.01□□□□□ -1.29
CBX3-203ENST00000409747 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
CBX3-203ENST00000409747 IGKV2D-30A0A075B6S6 120 aa6.98□□□□□ -1.29
CBX3-203ENST00000409747 C9orf118A6NHY6 69 aa6.98□□□□□ -1.29
CBX3-203ENST00000409747 IGKV2-30P06310 120 aa6.98□□□□□ -1.29
CBX3-203ENST00000409747 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
CBX3-203ENST00000409747 A0A1W2PPM0 123 aa6.96□□□□□ -1.29
CBX3-203ENST00000409747 CASC2Q6XLA1 102 aa6.93□□□□□ -1.3
CBX3-203ENST00000409747 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
CBX3-203ENST00000409747 TAX1BP3O14907 124 aa6.92□□□□□ -1.3
CBX3-203ENST00000409747 Q5W150 140 aa6.92□□□□□ -1.3
CBX3-203ENST00000409747 HCG22E2RYF7 251 aa6.9□□□□□ -1.3
CBX3-203ENST00000409747 CXCL6P80162 114 aa6.89□□□□□ -1.31
CBX3-203ENST00000409747 Q8N9L7 120 aa6.89□□□□□ -1.31
CBX3-203ENST00000409747 C4orf26Q17RF5 130 aa6.86□□□□□ -1.31
CBX3-203ENST00000409747 SPCS1Q9Y6A9 102 aa6.85□□□□□ -1.31
CBX3-203ENST00000409747 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
CBX3-203ENST00000409747 LOC100996750A0A140TA64 210 aa6.78□□□□□ -1.32
CBX3-203ENST00000409747 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
CBX3-203ENST00000409747 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
CBX3-203ENST00000409747 C5orf47Q569G3 176 aa6.78□□□□□ -1.32
CBX3-203ENST00000409747 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
CBX3-203ENST00000409747 S4R3F8 94 aa6.76□□□□□ -1.33
CBX3-203ENST00000409747 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
CBX3-203ENST00000409747 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
CBX3-203ENST00000409747 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
CBX3-203ENST00000409747 C1orf64Q8NEQ6 169 aa6.73□□□□□ -1.33
CBX3-203ENST00000409747 TP53AIP1Q9HCN2 124 aa6.73□□□□□ -1.33
CBX3-203ENST00000409747 COL5A1-AS1Q5SY13 56 aa6.73□□□□□ -1.33
CBX3-203ENST00000409747 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
CBX3-203ENST00000409747 PRO0461Q9UI25 63 aa6.72□□□□□ -1.33
CBX3-203ENST00000409747 K7EP34 96 aa6.7□□□□□ -1.34
CBX3-203ENST00000409747 LCA10Q71F78 164 aa6.7□□□□□ -1.34
CBX3-203ENST00000409747 Q5VV11 94 aa6.67□□□□□ -1.34
CBX3-203ENST00000409747 A6NN06 94 aa6.65□□□□□ -1.34
CBX3-203ENST00000409747 SPRR2GQ9BYE4 73 aa6.65□□□□□ -1.34
CBX3-203ENST00000409747 MT1BP07438 61 aa6.63□□□□□ -1.35
CBX3-203ENST00000409747 GTF2H5Q6ZYL4 71 aa6.63□□□□□ -1.35
CBX3-203ENST00000409747 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
CBX3-203ENST00000409747 KLKP1Q107X0 134 aa6.61□□□□□ -1.35
CBX3-203ENST00000409747 F8W1H4 67 aa6.59□□□□□ -1.35
CBX3-203ENST00000409747 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
CBX3-203ENST00000409747 TRAV22A0A0B4J277 110 aa6.56□□□□□ -1.36
CBX3-203ENST00000409747 ETDBQ3ZM63 59 aa6.56□□□□□ -1.36
CBX3-203ENST00000409747 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
CBX3-203ENST00000409747 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
CBX3-203ENST00000409747 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms