RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 H0YAA0 97 aa8.13□□□□□ -1.11
PPM1F-203ENST00000407142 CDH23Q9H251 3354 aa8.12□□□□□ -1.11
PPM1F-203ENST00000407142 APCP25054 2843 aa8.11□□□□□ -1.11
PPM1F-203ENST00000407142 P0C880 135 aa8.1□□□□□ -1.11
PPM1F-203ENST00000407142 TACC2O95359 2948 aa8.1□□□□□ -1.11
PPM1F-203ENST00000407142 ATMQ13315 3056 aa8.09□□□□□ -1.11
PPM1F-203ENST00000407142 COL12A1Q99715 3063 aa8.05□□□□□ -1.12
PPM1F-203ENST00000407142 NIPBLQ6KC79 2804 aaeCLIP8.05□□□□□ -1.126e-8■■■■■ 30.6
PPM1F-203ENST00000407142 LRBAP50851 2863 aa8.03□□□□□ -1.12
PPM1F-203ENST00000407142 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
PPM1F-203ENST00000407142 KRTAP10-8P60410 259 aa8□□□□□ -1.13
PPM1F-203ENST00000407142 REV3LO60673 3130 aa7.99□□□□□ -1.13
PPM1F-203ENST00000407142 FRYLO94915 3013 aa7.99□□□□□ -1.13
PPM1F-203ENST00000407142 DNAH14Q0VDD8 3507 aa7.97□□□□□ -1.13
PPM1F-203ENST00000407142 CRYBG3Q68DQ2 2970 aa7.97□□□□□ -1.13
PPM1F-203ENST00000407142 SZT2Q5T011 3432 aa7.95□□□□□ -1.14
PPM1F-203ENST00000407142 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
PPM1F-203ENST00000407142 EYSQ5T1H1 3165 aa7.95□□□□□ -1.14
PPM1F-203ENST00000407142 KRTAP10-10P60014 251 aa7.94□□□□□ -1.14
PPM1F-203ENST00000407142 CELSR3Q9NYQ7 3312 aa7.94□□□□□ -1.14
PPM1F-203ENST00000407142 LAMA1P25391 3075 aa7.92□□□□□ -1.14
PPM1F-203ENST00000407142 KALRNO60229 2985 aa7.91□□□□□ -1.14
PPM1F-203ENST00000407142 DMXL2Q8TDJ6 3036 aa7.89□□□□□ -1.15
PPM1F-203ENST00000407142 VCANP13611 3396 aa7.87□□□□□ -1.15
PPM1F-203ENST00000407142 TNRC18O15417 2968 aaPredicted RBP7.87□□□□□ -1.15
PPM1F-203ENST00000407142 PRO2289Q9P1D8 64 aa7.87□□□□□ -1.15
PPM1F-203ENST00000407142 FREM2Q5SZK8 3169 aa7.86□□□□□ -1.15
PPM1F-203ENST00000407142 ADGRG4Q8IZF6 3080 aa7.83□□□□□ -1.16
PPM1F-203ENST00000407142 NBEAQ8NFP9 2946 aa7.82□□□□□ -1.16
PPM1F-203ENST00000407142 ZZEF1O43149 2961 aa7.8□□□□□ -1.16
PPM1F-203ENST00000407142 BOD1L1Q8NFC6 3051 aa7.8□□□□□ -1.16
PPM1F-203ENST00000407142 CELSR2Q9HCU4 2923 aa7.79□□□□□ -1.16
PPM1F-203ENST00000407142 COL6A3P12111 3177 aa7.77□□□□□ -1.17
PPM1F-203ENST00000407142 DCHS2Q6V1P9 2916 aa7.75□□□□□ -1.17
PPM1F-203ENST00000407142 ASH1LQ9NR48 2969 aaKnown RBP7.72□□□□□ -1.17
PPM1F-203ENST00000407142 TENM2Q9NT68 2774 aa7.71□□□□□ -1.17
PPM1F-203ENST00000407142 ZANQ9Y493 2812 aa7.68□□□□□ -1.18
PPM1F-203ENST00000407142 TENM1Q9UKZ4 2725 aa7.67□□□□□ -1.18
PPM1F-203ENST00000407142 NF1P21359 2839 aa7.65□□□□□ -1.19
PPM1F-203ENST00000407142 HRNRQ86YZ3 2850 aaPredicted RBP7.65□□□□□ -1.19
PPM1F-203ENST00000407142 TENM3Q9P273 2699 aa7.62□□□□□ -1.19
PPM1F-203ENST00000407142 SPEGQ15772 3267 aa7.61□□□□□ -1.19
PPM1F-203ENST00000407142 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
PPM1F-203ENST00000407142 DMXL1Q9Y485 3027 aa7.55□□□□□ -1.2
PPM1F-203ENST00000407142 SPTBN5Q9NRC6 3674 aaKnown RBP7.54□□□□□ -1.2
PPM1F-203ENST00000407142 USP34Q70CQ2 3546 aa7.53□□□□□ -1.2
PPM1F-203ENST00000407142 CFAP47Q6ZTR5 3102 aa7.53□□□□□ -1.2
PPM1F-203ENST00000407142 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
PPM1F-203ENST00000407142 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
PPM1F-203ENST00000407142 KRTAP12-1P59990 96 aa7.45□□□□□ -1.22
PPM1F-203ENST00000407142 FBN2P35556 2912 aa7.42□□□□□ -1.22
PPM1F-203ENST00000407142 MYO15AQ9UKN7 3530 aa7.38□□□□□ -1.23
PPM1F-203ENST00000407142 CELSR1Q9NYQ6 3014 aa7.36□□□□□ -1.23
PPM1F-203ENST00000407142 TGP01266 2768 aa7.36□□□□□ -1.23
PPM1F-203ENST00000407142 LOC400499M0QZD8 3231 aa7.36□□□□□ -1.23
PPM1F-203ENST00000407142 PDZD2O15018 2839 aa7.35□□□□□ -1.23
PPM1F-203ENST00000407142 PKD1L1Q8TDX9 2849 aa7.29□□□□□ -1.24
PPM1F-203ENST00000407142 KRTAP3-1Q9BYR8 98 aa7.28□□□□□ -1.24
PPM1F-203ENST00000407142 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
PPM1F-203ENST00000407142 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
PPM1F-203ENST00000407142 VWFP04275 2813 aa7.15□□□□□ -1.26
PPM1F-203ENST00000407142 KRTAP10-6P60371 365 aaPredicted RBP7.14□□□□□ -1.27
PPM1F-203ENST00000407142 WDFY3Q8IZQ1 3526 aa7.13□□□□□ -1.27
PPM1F-203ENST00000407142 OTOGQ6ZRI0 2925 aa7.12□□□□□ -1.27
PPM1F-203ENST00000407142 INE1O15225 51 aa7.07□□□□□ -1.28
PPM1F-203ENST00000407142 ANK3Q12955 4377 aaKnown RBP7.05□□□□□ -1.28
PPM1F-203ENST00000407142 RELNP78509 3460 aa7.05□□□□□ -1.28
PPM1F-203ENST00000407142 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
PPM1F-203ENST00000407142 NBPF19A0A087WUL8 3843 aa7□□□□□ -1.29
PPM1F-203ENST00000407142 ZFHX4Q86UP3 3567 aa6.99□□□□□ -1.29
PPM1F-203ENST00000407142 MUC3AQ02505 3323 aa6.97□□□□□ -1.29
PPM1F-203ENST00000407142 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
PPM1F-203ENST00000407142 FBN1P35555 2871 aaKnown RBP6.92□□□□□ -1.3
PPM1F-203ENST00000407142 KRTAP10-4P60372 401 aaPredicted RBP6.92□□□□□ -1.3
PPM1F-203ENST00000407142 ASPMQ8IZT6 3477 aa6.91□□□□□ -1.3
PPM1F-203ENST00000407142 CSMD1Q96PZ7 3565 aa6.87□□□□□ -1.31
PPM1F-203ENST00000407142 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
PPM1F-203ENST00000407142 LAMA5O15230 3695 aa6.83□□□□□ -1.32
PPM1F-203ENST00000407142 ALMS1Q8TCU4 4167 aa6.82□□□□□ -1.32
PPM1F-203ENST00000407142 FBN3Q75N90 2809 aa6.81□□□□□ -1.32
PPM1F-203ENST00000407142 SMG1Q96Q15 3661 aaKnown RBP6.8□□□□□ -1.32
PPM1F-203ENST00000407142 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
PPM1F-203ENST00000407142 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
PPM1F-203ENST00000407142 DMDP11532 3685 aa6.77□□□□□ -1.33
PPM1F-203ENST00000407142 KRTAP10-12P60413 245 aa6.77□□□□□ -1.33
PPM1F-203ENST00000407142 ZFHX3Q15911 3703 aa6.77□□□□□ -1.33
PPM1F-203ENST00000407142 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
PPM1F-203ENST00000407142 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
PPM1F-203ENST00000407142 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
PPM1F-203ENST00000407142 HUWE1Q7Z6Z7 4374 aaKnown RBP6.67□□□□□ -1.34
PPM1F-203ENST00000407142 SVEP1Q4LDE5 3571 aa6.64□□□□□ -1.35
PPM1F-203ENST00000407142 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
PPM1F-203ENST00000407142 LCE3AQ5TA76 89 aa6.54□□□□□ -1.36
PPM1F-203ENST00000407142 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
PPM1F-203ENST00000407142 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
PPM1F-203ENST00000407142 CUBNO60494 3623 aa6.48□□□□□ -1.37
PPM1F-203ENST00000407142 CSMD2Q7Z408 3487 aa6.42□□□□□ -1.38
PPM1F-203ENST00000407142 SPENQ96T58 3664 aaKnown RBP6.42□□□□□ -1.38
PPM1F-203ENST00000407142 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
PPM1F-203ENST00000407142 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms