RNA–Protein interactions for RNA: ENST00000406386.7

TRIOBP-204, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIOBP, Length 10,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-204ENST00000406386 A8MU10 97 aa6.55□□□□□ -1.36
TRIOBP-204ENST00000406386 LAMA1P25391 3075 aa6.55□□□□□ -1.36
TRIOBP-204ENST00000406386 RPS29P62273 56 aaKnown RBP6.55□□□□□ -1.36
TRIOBP-204ENST00000406386 KRTAP4-16G5E9R7 235 aaPredicted RBP6.55□□□□□ -1.36
TRIOBP-204ENST00000406386 TNRC18O15417 2968 aaPredicted RBP6.54□□□□□ -1.36
TRIOBP-204ENST00000406386 CELSR3Q9NYQ7 3312 aa6.53□□□□□ -1.36
TRIOBP-204ENST00000406386 TNP1P09430 55 aa6.53□□□□□ -1.36
TRIOBP-204ENST00000406386 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
TRIOBP-204ENST00000406386 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
TRIOBP-204ENST00000406386 LCE6AA0A183 80 aa6.52□□□□□ -1.37
TRIOBP-204ENST00000406386 DMXL1Q9Y485 3027 aa6.47□□□□□ -1.37
TRIOBP-204ENST00000406386 BOD1L1Q8NFC6 3051 aa6.47□□□□□ -1.37
TRIOBP-204ENST00000406386 ZANQ9Y493 2812 aa6.47□□□□□ -1.37
TRIOBP-204ENST00000406386 KRTAP10-2P60368 255 aa6.46□□□□□ -1.37
TRIOBP-204ENST00000406386 TENM4Q6N022 2769 aa6.46□□□□□ -1.38
TRIOBP-204ENST00000406386 NOTCH2NLQ7Z3S9 236 aa6.45□□□□□ -1.38
TRIOBP-204ENST00000406386 COL6A3P12111 3177 aa6.45□□□□□ -1.38
TRIOBP-204ENST00000406386 KRTAP11-1Q8IUC1 163 aa6.44□□□□□ -1.38
TRIOBP-204ENST00000406386 HTTP42858 3142 aa6.44□□□□□ -1.38
TRIOBP-204ENST00000406386 VWFP04275 2813 aa6.41□□□□□ -1.38
TRIOBP-204ENST00000406386 ZFHX3Q15911 3703 aa6.4□□□□□ -1.39
TRIOBP-204ENST00000406386 FBN2P35556 2912 aa6.39□□□□□ -1.39
TRIOBP-204ENST00000406386 DCHS2Q6V1P9 2916 aa6.39□□□□□ -1.39
TRIOBP-204ENST00000406386 ATMQ13315 3056 aa6.37□□□□□ -1.39
TRIOBP-204ENST00000406386 MXRA5Q9NR99 2828 aa6.36□□□□□ -1.39
TRIOBP-204ENST00000406386 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.39
TRIOBP-204ENST00000406386 HRNRQ86YZ3 2850 aaPredicted RBP6.34□□□□□ -1.4
TRIOBP-204ENST00000406386 ADGRG4Q8IZF6 3080 aa6.33□□□□□ -1.4
TRIOBP-204ENST00000406386 UNC80Q8N2C7 3258 aa6.33□□□□□ -1.4
TRIOBP-204ENST00000406386 CELSR1Q9NYQ6 3014 aa6.31□□□□□ -1.4
TRIOBP-204ENST00000406386 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
TRIOBP-204ENST00000406386 P0C880 135 aa6.28□□□□□ -1.4
TRIOBP-204ENST00000406386 BRCA2P51587 3418 aa6.28□□□□□ -1.4
TRIOBP-204ENST00000406386 LAMA3Q16787 3333 aa6.27□□□□□ -1.41
TRIOBP-204ENST00000406386 WDFY3Q8IZQ1 3526 aa6.27□□□□□ -1.41
TRIOBP-204ENST00000406386 SPTBN5Q9NRC6 3674 aaKnown RBP6.26□□□□□ -1.41
TRIOBP-204ENST00000406386 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
TRIOBP-204ENST00000406386 CDH23Q9H251 3354 aa6.2□□□□□ -1.42
TRIOBP-204ENST00000406386 TENM2Q9NT68 2774 aa6.19□□□□□ -1.42
TRIOBP-204ENST00000406386 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
TRIOBP-204ENST00000406386 VCANP13611 3396 aa6.18□□□□□ -1.42
TRIOBP-204ENST00000406386 KRTAP10-8P60410 259 aa6.18□□□□□ -1.42
TRIOBP-204ENST00000406386 NBPF19A0A087WUL8 3843 aa6.16□□□□□ -1.42
TRIOBP-204ENST00000406386 H0YAA0 97 aa6.15□□□□□ -1.42
TRIOBP-204ENST00000406386 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
TRIOBP-204ENST00000406386 CFAP47Q6ZTR5 3102 aa6.09□□□□□ -1.43
TRIOBP-204ENST00000406386 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
TRIOBP-204ENST00000406386 SPENQ96T58 3664 aaKnown RBP6.07□□□□□ -1.44
TRIOBP-204ENST00000406386 DMDP11532 3685 aa6.07□□□□□ -1.44
TRIOBP-204ENST00000406386 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
TRIOBP-204ENST00000406386 SPEGQ15772 3267 aa6.06□□□□□ -1.44
TRIOBP-204ENST00000406386 LAMA5O15230 3695 aa6.06□□□□□ -1.44
TRIOBP-204ENST00000406386 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
TRIOBP-204ENST00000406386 XP32Q5T750 250 aa5.97□□□□□ -1.45
TRIOBP-204ENST00000406386 ASPMQ8IZT6 3477 aa5.97□□□□□ -1.45
TRIOBP-204ENST00000406386 ZFHX4Q86UP3 3567 aa5.95□□□□□ -1.46
TRIOBP-204ENST00000406386 SZT2Q5T011 3432 aa5.94□□□□□ -1.46
TRIOBP-204ENST00000406386 MYO15AQ9UKN7 3530 aa5.94□□□□□ -1.46
TRIOBP-204ENST00000406386 AKAP9Q99996 3911 aa5.91□□□□□ -1.46
TRIOBP-204ENST00000406386 TPRXLQ17RH7 258 aa5.9□□□□□ -1.47
TRIOBP-204ENST00000406386 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
TRIOBP-204ENST00000406386 VPS13CQ709C8 3753 aa5.89□□□□□ -1.47
TRIOBP-204ENST00000406386 EYSQ5T1H1 3165 aa5.86□□□□□ -1.47
TRIOBP-204ENST00000406386 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
TRIOBP-204ENST00000406386 MEGF8Q7Z7M0 2845 aa5.86□□□□□ -1.47
TRIOBP-204ENST00000406386 KRTAP21-3Q3LHN1 58 aa5.85□□□□□ -1.47
TRIOBP-204ENST00000406386 RELNP78509 3460 aa5.79□□□□□ -1.48
TRIOBP-204ENST00000406386 KRTAP1-4P0C5Y4 121 aa5.78□□□□□ -1.48
TRIOBP-204ENST00000406386 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
TRIOBP-204ENST00000406386 CSMD1Q96PZ7 3565 aa5.77□□□□□ -1.49
TRIOBP-204ENST00000406386 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
TRIOBP-204ENST00000406386 LOC400499M0QZD8 3231 aa5.75□□□□□ -1.49
TRIOBP-204ENST00000406386 FBN1P35555 2871 aaKnown RBP5.73□□□□□ -1.49
TRIOBP-204ENST00000406386 FBN3Q75N90 2809 aa5.72□□□□□ -1.49
TRIOBP-204ENST00000406386 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
TRIOBP-204ENST00000406386 OTOGQ6ZRI0 2925 aa5.67□□□□□ -1.5
TRIOBP-204ENST00000406386 INE1O15225 51 aa5.65□□□□□ -1.5
TRIOBP-204ENST00000406386 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
TRIOBP-204ENST00000406386 DCHS1Q96JQ0 3298 aa5.6□□□□□ -1.51
TRIOBP-204ENST00000406386 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
TRIOBP-204ENST00000406386 TRRAPQ9Y4A5 3859 aa5.55□□□□□ -1.52
TRIOBP-204ENST00000406386 SVEP1Q4LDE5 3571 aa5.47□□□□□ -1.53
TRIOBP-204ENST00000406386 ALMS1Q8TCU4 4167 aa5.46□□□□□ -1.54
TRIOBP-204ENST00000406386 CSMD3Q7Z407 3707 aa5.4□□□□□ -1.54
TRIOBP-204ENST00000406386 CUBNO60494 3623 aa5.38□□□□□ -1.55
TRIOBP-204ENST00000406386 LYSTQ99698 3801 aa5.37□□□□□ -1.55
TRIOBP-204ENST00000406386 BSNQ9UPA5 3926 aa5.36□□□□□ -1.55
TRIOBP-204ENST00000406386 CMYA5Q8N3K9 4069 aa5.31□□□□□ -1.56
TRIOBP-204ENST00000406386 MUC3AQ02505 3323 aa5.29□□□□□ -1.56
TRIOBP-204ENST00000406386 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
TRIOBP-204ENST00000406386 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
TRIOBP-204ENST00000406386 KRTAP3-1Q9BYR8 98 aa5.2□□□□□ -1.58
TRIOBP-204ENST00000406386 CSMD2Q7Z408 3487 aa5.19□□□□□ -1.58
TRIOBP-204ENST00000406386 DNAH3Q8TD57 4116 aa5.15□□□□□ -1.58
TRIOBP-204ENST00000406386 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
TRIOBP-204ENST00000406386 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
TRIOBP-204ENST00000406386 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
TRIOBP-204ENST00000406386 DNAH7Q8WXX0 4024 aa5.1□□□□□ -1.59
TRIOBP-204ENST00000406386 KRTAP12-3P60328 96 aa5.08□□□□□ -1.6
TRIOBP-204ENST00000406386 ANK2Q01484 3957 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms