RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 CD164Q04900 197 aa9.54□□□□□ -0.88
CDKN1A-203ENST00000405375 A0A087X002 238 aa9.53□□□□□ -0.88
CDKN1A-203ENST00000405375 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
CDKN1A-203ENST00000405375 KRTAP10-1P60331 282 aa9.53□□□□□ -0.88
CDKN1A-203ENST00000405375 SSBP3-AS1Q7Z2R9 100 aa9.53□□□□□ -0.88
CDKN1A-203ENST00000405375 MPLKIPQ8TAP9 179 aa9.52□□□□□ -0.89
CDKN1A-203ENST00000405375 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
CDKN1A-203ENST00000405375 PKD1P98161 4303 aa9.5□□□□□ -0.89
CDKN1A-203ENST00000405375 FAT2Q9NYQ8 4349 aa9.5□□□□□ -0.89
CDKN1A-203ENST00000405375 LRP1BQ9NZR2 4599 aa9.48□□□□□ -0.89
CDKN1A-203ENST00000405375 SPINK6Q6UWN8 80 aa9.48□□□□□ -0.89
CDKN1A-203ENST00000405375 NDUFS5O43920 106 aa9.47□□□□□ -0.89
CDKN1A-203ENST00000405375 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
CDKN1A-203ENST00000405375 Q1T7F1 81 aa9.44□□□□□ -0.9
CDKN1A-203ENST00000405375 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
CDKN1A-203ENST00000405375 PCOTHQ58A44 107 aa9.4□□□□□ -0.9
CDKN1A-203ENST00000405375 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
CDKN1A-203ENST00000405375 SACSQ9NZJ4 4579 aa9.37□□□□□ -0.91
CDKN1A-203ENST00000405375 C8orf87E5RJ46 101 aa9.37□□□□□ -0.91
CDKN1A-203ENST00000405375 KRTAP13-3Q3SY46 172 aa9.37□□□□□ -0.91
CDKN1A-203ENST00000405375 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
CDKN1A-203ENST00000405375 Q5W150 140 aa9.36□□□□□ -0.91
CDKN1A-203ENST00000405375 BRK1Q8WUW1 75 aa9.36□□□□□ -0.91
CDKN1A-203ENST00000405375 C1orf195Q5TG92 126 aa9.35□□□□□ -0.91
CDKN1A-203ENST00000405375 LOC101927531A0A1B0GV80 90 aa9.31□□□□□ -0.92
CDKN1A-203ENST00000405375 COA5Q86WW8 74 aa9.31□□□□□ -0.92
CDKN1A-203ENST00000405375 Q8N9P0 234 aaPredicted RBP9.31□□□□□ -0.92
CDKN1A-203ENST00000405375 V9GYY9 64 aa9.31□□□□□ -0.92
CDKN1A-203ENST00000405375 LINC00313P59037 77 aa9.3□□□□□ -0.92
CDKN1A-203ENST00000405375 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
CDKN1A-203ENST00000405375 PSPHP1O15172 72 aa9.28□□□□□ -0.92
CDKN1A-203ENST00000405375 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
CDKN1A-203ENST00000405375 PLA2G1BP04054 148 aaKnown RBP9.26□□□□□ -0.93
CDKN1A-203ENST00000405375 A8MUN3 132 aa9.24□□□□□ -0.93
CDKN1A-203ENST00000405375 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
CDKN1A-203ENST00000405375 FAM229AH3BQW9 127 aa9.21□□□□□ -0.93
CDKN1A-203ENST00000405375 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.93
CDKN1A-203ENST00000405375 HRES1P13985 223 aa9.21□□□□□ -0.94
CDKN1A-203ENST00000405375 Q5VV11 94 aa9.19□□□□□ -0.94
CDKN1A-203ENST00000405375 SPINK1P00995 79 aa9.19□□□□□ -0.94
CDKN1A-203ENST00000405375 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
CDKN1A-203ENST00000405375 KMT2CQ8NEZ4 4911 aaKnown RBP9.16□□□□□ -0.94
CDKN1A-203ENST00000405375 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
CDKN1A-203ENST00000405375 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
CDKN1A-203ENST00000405375 IGKV2-30P06310 120 aa9.13□□□□□ -0.95
CDKN1A-203ENST00000405375 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
CDKN1A-203ENST00000405375 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
CDKN1A-203ENST00000405375 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
CDKN1A-203ENST00000405375 RPS29P62273 56 aaKnown RBP9.11□□□□□ -0.95
CDKN1A-203ENST00000405375 RYR2Q92736 4967 aa9.11□□□□□ -0.95
CDKN1A-203ENST00000405375 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
CDKN1A-203ENST00000405375 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
CDKN1A-203ENST00000405375 SPAG11AQ6PDA7 123 aa9.09□□□□□ -0.95
CDKN1A-203ENST00000405375 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
CDKN1A-203ENST00000405375 LINC01558Q9Y6Z2 57 aa9.09□□□□□ -0.95
CDKN1A-203ENST00000405375 Q75L30 129 aa9.07□□□□□ -0.96
CDKN1A-203ENST00000405375 CHKB-CPT1BH3BT56 60 aa9.07□□□□□ -0.96
CDKN1A-203ENST00000405375 ACYP2P14621 99 aa9.07□□□□□ -0.96
CDKN1A-203ENST00000405375 KRTAP10-4P60372 401 aaPredicted RBP9.06□□□□□ -0.96
CDKN1A-203ENST00000405375 APOBP04114 4563 aaKnown RBP9.04□□□□□ -0.96
CDKN1A-203ENST00000405375 FAT1Q14517 4588 aa9.03□□□□□ -0.96
CDKN1A-203ENST00000405375 A8MU10 97 aa9.01□□□□□ -0.97
CDKN1A-203ENST00000405375 IGKV2D-30A0A075B6S6 120 aa9□□□□□ -0.97
CDKN1A-203ENST00000405375 PMAIP1Q13794 54 aa8.98□□□□□ -0.97
CDKN1A-203ENST00000405375 PKHD1L1Q86WI1 4243 aa8.97□□□□□ -0.97
CDKN1A-203ENST00000405375 A6NED7 52 aa8.94□□□□□ -0.98
CDKN1A-203ENST00000405375 LCA10Q71F78 164 aa8.94□□□□□ -0.98
CDKN1A-203ENST00000405375 RYR3Q15413 4870 aa8.9□□□□□ -0.98
CDKN1A-203ENST00000405375 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
CDKN1A-203ENST00000405375 C7orf65Q6ZTY9 151 aa8.88□□□□□ -0.99
CDKN1A-203ENST00000405375 SPINK7P58062 85 aa8.87□□□□□ -0.99
CDKN1A-203ENST00000405375 CDC42SE1Q9NRR8 79 aa8.87□□□□□ -0.99
CDKN1A-203ENST00000405375 C20orf166-AS1Q96NR2 134 aa8.87□□□□□ -0.99
CDKN1A-203ENST00000405375 A8MUU9 505 aa8.85□□□□□ -0.99
CDKN1A-203ENST00000405375 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
CDKN1A-203ENST00000405375 SEC61GP60059 68 aa8.83□□□□□ -1
CDKN1A-203ENST00000405375 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
CDKN1A-203ENST00000405375 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
CDKN1A-203ENST00000405375 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
CDKN1A-203ENST00000405375 Q8N1X5 172 aa8.77□□□□□ -1.01
CDKN1A-203ENST00000405375 A0A1B0GU69 56 aa8.77□□□□□ -1.01
CDKN1A-203ENST00000405375 HSPG2P98160 4391 aa8.75□□□□□ -1.01
CDKN1A-203ENST00000405375 A6NN06 94 aa8.73□□□□□ -1.01
CDKN1A-203ENST00000405375 LRP1Q07954 4544 aaKnown RBP8.69□□□□□ -1.02
CDKN1A-203ENST00000405375 TNXBP22105 4242 aa8.69□□□□□ -1.02
CDKN1A-203ENST00000405375 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
CDKN1A-203ENST00000405375 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
CDKN1A-203ENST00000405375 Q5VSD8 79 aa8.66□□□□□ -1.02
CDKN1A-203ENST00000405375 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
CDKN1A-203ENST00000405375 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
CDKN1A-203ENST00000405375 RYR1P21817 5038 aa8.64□□□□□ -1.03
CDKN1A-203ENST00000405375 SPATA8Q6RVD6 105 aa8.62□□□□□ -1.03
CDKN1A-203ENST00000405375 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
CDKN1A-203ENST00000405375 UQCR11O14957 56 aa8.6□□□□□ -1.03
CDKN1A-203ENST00000405375 EPPK1P58107 5090 aaKnown RBP8.58□□□□□ -1.04
CDKN1A-203ENST00000405375 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
CDKN1A-203ENST00000405375 MIR22HGQ0VDD5 57 aa8.56□□□□□ -1.04
CDKN1A-203ENST00000405375 COX6B2Q6YFQ2 88 aa8.52□□□□□ -1.04
CDKN1A-203ENST00000405375 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.04
CDKN1A-203ENST00000405375 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms