RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 FAM236CP0DP71 79 aa7.71□□□□□ -1.18
TPM1-207ENST00000403994 USH2AO75445 5202 aa7.71□□□□□ -1.18
TPM1-207ENST00000403994 BAALC-AS2P0C853 105 aa7.69□□□□□ -1.18
TPM1-207ENST00000403994 C9JAW5 83 aa7.68□□□□□ -1.18
TPM1-207ENST00000403994 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
TPM1-207ENST00000403994 LCE2BO14633 110 aa7.67□□□□□ -1.18
TPM1-207ENST00000403994 J3KT08 172 aa7.66□□□□□ -1.18
TPM1-207ENST00000403994 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
TPM1-207ENST00000403994 Q6ZQT0 140 aa7.66□□□□□ -1.18
TPM1-207ENST00000403994 NAA38Q9BRA0 125 aaKnown RBP7.65□□□□□ -1.18
TPM1-207ENST00000403994 SSPOA2VEC9 5147 aa7.65□□□□□ -1.19
TPM1-207ENST00000403994 M0R143 59 aa7.64□□□□□ -1.19
TPM1-207ENST00000403994 MT2AP02795 61 aa7.64□□□□□ -1.19
TPM1-207ENST00000403994 ATXN8Q156A1 80 aa7.63□□□□□ -1.19
TPM1-207ENST00000403994 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
TPM1-207ENST00000403994 LOC110117498A0A087WWA1 95 aa7.61□□□□□ -1.19
TPM1-207ENST00000403994 JMJD7-PLA2G4BH0Y9G9 81 aa7.6□□□□□ -1.19
TPM1-207ENST00000403994 MT1FP04733 61 aa7.59□□□□□ -1.19
TPM1-207ENST00000403994 A8MWP4 228 aa7.58□□□□□ -1.2
TPM1-207ENST00000403994 NDUFB1O75438 58 aa7.58□□□□□ -1.2
TPM1-207ENST00000403994 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
TPM1-207ENST00000403994 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
TPM1-207ENST00000403994 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
TPM1-207ENST00000403994 A0A1B0GW54 56 aa7.56□□□□□ -1.2
TPM1-207ENST00000403994 SPINK7P58062 85 aa7.56□□□□□ -1.2
TPM1-207ENST00000403994 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
TPM1-207ENST00000403994 SMIM6P0DI80 62 aa7.55□□□□□ -1.2
TPM1-207ENST00000403994 PDE6GP18545 87 aa7.55□□□□□ -1.2
TPM1-207ENST00000403994 MTURNQ8N3F0 131 aa7.54□□□□□ -1.2
TPM1-207ENST00000403994 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
TPM1-207ENST00000403994 KRTAP10-10P60014 251 aa7.51□□□□□ -1.21
TPM1-207ENST00000403994 Q6ZVQ6 151 aa7.51□□□□□ -1.21
TPM1-207ENST00000403994 WFDC13Q8IUB5 93 aa7.5□□□□□ -1.21
TPM1-207ENST00000403994 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
TPM1-207ENST00000403994 PRR15Q8IV56 129 aa7.49□□□□□ -1.21
TPM1-207ENST00000403994 FCGBPQ9Y6R7 5405 aaPredicted RBP7.49□□□□□ -1.21
TPM1-207ENST00000403994 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
TPM1-207ENST00000403994 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.47□□□□□ -1.21
TPM1-207ENST00000403994 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
TPM1-207ENST00000403994 BATFQ16520 125 aa7.47□□□□□ -1.21
TPM1-207ENST00000403994 NREPQ16612 68 aa7.46□□□□□ -1.22
TPM1-207ENST00000403994 TSTD3H0UI37 97 aa7.45□□□□□ -1.22
TPM1-207ENST00000403994 TMEM254Q8TBM7 123 aa7.44□□□□□ -1.22
TPM1-207ENST00000403994 H3BT86 120 aa7.42□□□□□ -1.22
TPM1-207ENST00000403994 K7EQZ3 153 aa7.42□□□□□ -1.22
TPM1-207ENST00000403994 MRPL34Q9BQ48 92 aaKnown RBP7.42□□□□□ -1.22
TPM1-207ENST00000403994 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
TPM1-207ENST00000403994 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
TPM1-207ENST00000403994 C9orf118A6NHY6 69 aa7.39□□□□□ -1.23
TPM1-207ENST00000403994 KRTAP9-7A8MTY7 169 aa7.39□□□□□ -1.23
TPM1-207ENST00000403994 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
TPM1-207ENST00000403994 TAX1BP3O14907 124 aa7.37□□□□□ -1.23
TPM1-207ENST00000403994 NDUFS5O43920 106 aa7.36□□□□□ -1.23
TPM1-207ENST00000403994 BPY2O14599 106 aa7.34□□□□□ -1.23
TPM1-207ENST00000403994 IGKV2D-30A0A075B6S6 120 aa7.3□□□□□ -1.24
TPM1-207ENST00000403994 IGKV2-30P06310 120 aa7.3□□□□□ -1.24
TPM1-207ENST00000403994 H1FX-AS1Q4G0G2 97 aa7.3□□□□□ -1.24
TPM1-207ENST00000403994 Q8N9L7 120 aa7.3□□□□□ -1.24
TPM1-207ENST00000403994 LOC105371267A0A1B0GV96 52 aa7.29□□□□□ -1.24
TPM1-207ENST00000403994 C7orf65Q6ZTY9 151 aa7.29□□□□□ -1.24
TPM1-207ENST00000403994 Q5W150 140 aa7.28□□□□□ -1.24
TPM1-207ENST00000403994 SPCS1Q9Y6A9 102 aa7.27□□□□□ -1.25
TPM1-207ENST00000403994 CASC2Q6XLA1 102 aa7.26□□□□□ -1.25
TPM1-207ENST00000403994 KRTAP19-6Q3LI70 58 aa7.25□□□□□ -1.25
TPM1-207ENST00000403994 HCG22E2RYF7 251 aa7.23□□□□□ -1.25
TPM1-207ENST00000403994 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.25
TPM1-207ENST00000403994 CXCL6P80162 114 aa7.19□□□□□ -1.26
TPM1-207ENST00000403994 LINC00846Q9NV44 126 aa7.19□□□□□ -1.26
TPM1-207ENST00000403994 C4orf26Q17RF5 130 aa7.18□□□□□ -1.26
TPM1-207ENST00000403994 PRO0461Q9UI25 63 aa7.18□□□□□ -1.26
TPM1-207ENST00000403994 UBL5Q9BZL1 73 aa7.16□□□□□ -1.26
TPM1-207ENST00000403994 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
TPM1-207ENST00000403994 K7EP34 96 aa7.13□□□□□ -1.27
TPM1-207ENST00000403994 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
TPM1-207ENST00000403994 C5orf47Q569G3 176 aa7.08□□□□□ -1.28
TPM1-207ENST00000403994 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
TPM1-207ENST00000403994 S4R3F8 94 aa7.05□□□□□ -1.28
TPM1-207ENST00000403994 FAM236AA0A1B0GUQ0 79 aa7.02□□□□□ -1.29
TPM1-207ENST00000403994 FAM236BA0A1B0GV22 79 aa7.02□□□□□ -1.29
TPM1-207ENST00000403994 C1orf64Q8NEQ6 169 aa7.02□□□□□ -1.29
TPM1-207ENST00000403994 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
TPM1-207ENST00000403994 LCA10Q71F78 164 aa7□□□□□ -1.29
TPM1-207ENST00000403994 GTF2H5Q6ZYL4 71 aa6.99□□□□□ -1.29
TPM1-207ENST00000403994 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
TPM1-207ENST00000403994 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
TPM1-207ENST00000403994 F8W1H4 67 aa6.96□□□□□ -1.3
TPM1-207ENST00000403994 MT1BP07438 61 aa6.93□□□□□ -1.3
TPM1-207ENST00000403994 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
TPM1-207ENST00000403994 SPRR2GQ9BYE4 73 aa6.92□□□□□ -1.3
TPM1-207ENST00000403994 Q5VV11 94 aa6.9□□□□□ -1.3
TPM1-207ENST00000403994 CYP4F30PQ9H0H9 118 aa6.9□□□□□ -1.3
TPM1-207ENST00000403994 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
TPM1-207ENST00000403994 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
TPM1-207ENST00000403994 PCP4L1A6NKN8 68 aa6.86□□□□□ -1.31
TPM1-207ENST00000403994 A6NN06 94 aa6.86□□□□□ -1.31
TPM1-207ENST00000403994 KLKP1Q107X0 134 aa6.86□□□□□ -1.31
TPM1-207ENST00000403994 A0A087WVE0 104 aa6.84□□□□□ -1.31
TPM1-207ENST00000403994 LOC101927531A0A1B0GV80 90 aa6.84□□□□□ -1.31
TPM1-207ENST00000403994 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
TPM1-207ENST00000403994 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms