RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 H3BUT2 72 aa4.42□□□□□ -1.7
NUP43-204ENST00000403890 HIST1H4GQ99525 98 aa4.42□□□□□ -1.7
NUP43-204ENST00000403890 S100A2P29034 98 aa4.41□□□□□ -1.7
NUP43-204ENST00000403890 LINC00313P59037 77 aa4.41□□□□□ -1.7
NUP43-204ENST00000403890 MTURNQ8N3F0 131 aa4.41□□□□□ -1.7
NUP43-204ENST00000403890 A0A087WSZ3 146 aa4.4□□□□□ -1.71
NUP43-204ENST00000403890 A6NN06 94 aa4.4□□□□□ -1.71
NUP43-204ENST00000403890 NDUFV3P56181 108 aaKnown RBP4.4□□□□□ -1.71
NUP43-204ENST00000403890 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
NUP43-204ENST00000403890 RAB37Q96AX2 223 aa4.4□□□□□ -1.71
NUP43-204ENST00000403890 H3BMG7 143 aa4.39□□□□□ -1.71
NUP43-204ENST00000403890 FABP2P12104 132 aa4.38□□□□□ -1.71
NUP43-204ENST00000403890 DSCR10P59022 87 aa4.38□□□□□ -1.71
NUP43-204ENST00000403890 SIGMAR1Q99720 223 aa4.37□□□□□ -1.71
NUP43-204ENST00000403890 IGKV2D-30A0A075B6S6 120 aa4.36□□□□□ -1.71
NUP43-204ENST00000403890 IGKV4-1P06312 121 aa4.36□□□□□ -1.71
NUP43-204ENST00000403890 A0A1B0GX51 115 aa4.35□□□□□ -1.71
NUP43-204ENST00000403890 H3BQ85 93 aa4.35□□□□□ -1.71
NUP43-204ENST00000403890 ANKRD29Q8N6D5 301 aa4.35□□□□□ -1.71
NUP43-204ENST00000403890 S100A6P06703 90 aa4.34□□□□□ -1.71
NUP43-204ENST00000403890 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
NUP43-204ENST00000403890 DNAL4O96015 105 aa4.32□□□□□ -1.72
NUP43-204ENST00000403890 COX8AP10176 69 aa4.32□□□□□ -1.72
NUP43-204ENST00000403890 HIST1H2BLQ99880 126 aa4.32□□□□□ -1.72
NUP43-204ENST00000403890 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
NUP43-204ENST00000403890 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
NUP43-204ENST00000403890 TRBV7-4A0A0J9YYF1 115 aa4.31□□□□□ -1.72
NUP43-204ENST00000403890 DLEU1O43261 78 aa4.31□□□□□ -1.72
NUP43-204ENST00000403890 TRIAP1O43715 76 aa4.31□□□□□ -1.72
NUP43-204ENST00000403890 HIST3H2BBQ8N257 126 aa4.31□□□□□ -1.72
NUP43-204ENST00000403890 A0A1W2PNM2 257 aa4.3□□□□□ -1.72
NUP43-204ENST00000403890 TMEM256-PLSCR3K7ERE1 68 aa4.3□□□□□ -1.72
NUP43-204ENST00000403890 PRO1854Q9UHT4 67 aa4.3□□□□□ -1.72
NUP43-204ENST00000403890 TRACP01848 142 aa4.29□□□□□ -1.72
NUP43-204ENST00000403890 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
NUP43-204ENST00000403890 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
NUP43-204ENST00000403890 ORMDL1Q9P0S3 153 aa4.29□□□□□ -1.72
NUP43-204ENST00000403890 C8orf87E5RJ46 101 aa4.28□□□□□ -1.72
NUP43-204ENST00000403890 COX6CP09669 75 aa4.28□□□□□ -1.72
NUP43-204ENST00000403890 S100A1P23297 94 aa4.28□□□□□ -1.72
NUP43-204ENST00000403890 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
NUP43-204ENST00000403890 HIGD1BQ9P298 99 aa4.28□□□□□ -1.72
NUP43-204ENST00000403890 CCKP06307 115 aa4.27□□□□□ -1.73
NUP43-204ENST00000403890 CEND1Q8N111 149 aa4.27□□□□□ -1.73
NUP43-204ENST00000403890 SPRR2EP22531 72 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 MT3P25713 68 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 SPRR2BP35325 72 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 SPRR2AP35326 72 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 PSMB2P49721 201 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 LYRM7Q5U5X0 104 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 GPR98Q8WXG9 6306 aa4.26□□□□□ -1.73
NUP43-204ENST00000403890 A0A1B0GV72 72 aa4.25□□□□□ -1.73
NUP43-204ENST00000403890 NDUFB1O75438 58 aa4.25□□□□□ -1.73
NUP43-204ENST00000403890 SPINK7P58062 85 aa4.25□□□□□ -1.73
NUP43-204ENST00000403890 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
NUP43-204ENST00000403890 C21orf62-AS1Q17RA5 79 aa4.25□□□□□ -1.73
NUP43-204ENST00000403890 VPS25Q9BRG1 176 aa4.25□□□□□ -1.73
NUP43-204ENST00000403890 J3KT08 172 aa4.24□□□□□ -1.73
NUP43-204ENST00000403890 MT1BP07438 61 aa4.24□□□□□ -1.73
NUP43-204ENST00000403890 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
NUP43-204ENST00000403890 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
NUP43-204ENST00000403890 DSCR8Q96T75 97 aa4.24□□□□□ -1.73
NUP43-204ENST00000403890 A0A1B0GVX0 72 aa4.23□□□□□ -1.73
NUP43-204ENST00000403890 RBM3P98179 157 aaKnown RBP4.23□□□□□ -1.73
NUP43-204ENST00000403890 UBE2V1Q13404 147 aa4.23□□□□□ -1.73
NUP43-204ENST00000403890 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
NUP43-204ENST00000403890 Q5VV11 94 aa4.22□□□□□ -1.73
NUP43-204ENST00000403890 VAMP8Q9BV40 100 aa4.22□□□□□ -1.73
NUP43-204ENST00000403890 SCGB1C2P0DMR2 95 aa4.21□□□□□ -1.74
NUP43-204ENST00000403890 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
NUP43-204ENST00000403890 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
NUP43-204ENST00000403890 C9JAW5 83 aa4.19□□□□□ -1.74
NUP43-204ENST00000403890 FXYD2P54710 66 aa4.18□□□□□ -1.74
NUP43-204ENST00000403890 C2orf91Q6ZV80 131 aa4.18□□□□□ -1.74
NUP43-204ENST00000403890 KRTAP19-8Q3LI54 63 aa4.16□□□□□ -1.74
NUP43-204ENST00000403890 BAALC-AS2P0C853 105 aa4.15□□□□□ -1.75
NUP43-204ENST00000403890 HSD52Q0P140 79 aa4.15□□□□□ -1.75
NUP43-204ENST00000403890 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
NUP43-204ENST00000403890 IGKV3D-7A0A0C4DH55 119 aa4.14□□□□□ -1.75
NUP43-204ENST00000403890 Q6ZQT0 140 aa4.14□□□□□ -1.75
NUP43-204ENST00000403890 A0A1B0GW54 56 aa4.13□□□□□ -1.75
NUP43-204ENST00000403890 C8orf17Q9NRJ1 99 aa4.13□□□□□ -1.75
NUP43-204ENST00000403890 JMJD7-PLA2G4BH0Y9G9 81 aa4.12□□□□□ -1.75
NUP43-204ENST00000403890 SPRR2DP22532 72 aa4.12□□□□□ -1.75
NUP43-204ENST00000403890 Q6ZVQ6 151 aa4.12□□□□□ -1.75
NUP43-204ENST00000403890 K7ERJ3 54 aa4.11□□□□□ -1.75
NUP43-204ENST00000403890 PDE6GP18545 87 aa4.11□□□□□ -1.75
NUP43-204ENST00000403890 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
NUP43-204ENST00000403890 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
NUP43-204ENST00000403890 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
NUP43-204ENST00000403890 NDUFS5O43920 106 aa4.1□□□□□ -1.75
NUP43-204ENST00000403890 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
NUP43-204ENST00000403890 NREPQ16612 68 aa4.09□□□□□ -1.75
NUP43-204ENST00000403890 IMUPQ9GZP8 106 aa4.09□□□□□ -1.75
NUP43-204ENST00000403890 MRPL34Q9BQ48 92 aaKnown RBP4.08□□□□□ -1.76
NUP43-204ENST00000403890 ATXN8Q156A1 80 aa4.07□□□□□ -1.76
NUP43-204ENST00000403890 PRR15Q8IV56 129 aa4.07□□□□□ -1.76
NUP43-204ENST00000403890 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
NUP43-204ENST00000403890 UQCR10Q9UDW1 63 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms