RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 WWC2-AS2Q96NR7 200 aa7.16□□□□□ -1.26
RBM39-206ENST00000403542 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
RBM39-206ENST00000403542 H3BPC8 53 aa7.15□□□□□ -1.27
RBM39-206ENST00000403542 A0A1B0GVX0 72 aa7.14□□□□□ -1.27
RBM39-206ENST00000403542 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
RBM39-206ENST00000403542 IGLV5-52A0A0A0MRZ9 124 aa7.13□□□□□ -1.27
RBM39-206ENST00000403542 NUPR2A6NF83 97 aa7.13□□□□□ -1.27
RBM39-206ENST00000403542 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
RBM39-206ENST00000403542 DNAH11Q96DT5 4516 aa7.12□□□□□ -1.27
RBM39-206ENST00000403542 A6NED7 52 aa7.12□□□□□ -1.27
RBM39-206ENST00000403542 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
RBM39-206ENST00000403542 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
RBM39-206ENST00000403542 ZNF861PO60384 105 aa7.1□□□□□ -1.27
RBM39-206ENST00000403542 DNHD1Q96M86 4753 aa7.1□□□□□ -1.27
RBM39-206ENST00000403542 Q5W150 140 aa7.1□□□□□ -1.27
RBM39-206ENST00000403542 LIMD2Q9BT23 127 aa7.1□□□□□ -1.27
RBM39-206ENST00000403542 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
RBM39-206ENST00000403542 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
RBM39-206ENST00000403542 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
RBM39-206ENST00000403542 HRES1P13985 223 aa7.07□□□□□ -1.28
RBM39-206ENST00000403542 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
RBM39-206ENST00000403542 LCA10Q71F78 164 aa7.06□□□□□ -1.28
RBM39-206ENST00000403542 PRR26Q8N8Z3 221 aa7.06□□□□□ -1.28
RBM39-206ENST00000403542 Q6ZR54 194 aa7.06□□□□□ -1.28
RBM39-206ENST00000403542 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
RBM39-206ENST00000403542 LY6G6CO95867 125 aa7.04□□□□□ -1.28
RBM39-206ENST00000403542 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
RBM39-206ENST00000403542 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
RBM39-206ENST00000403542 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
RBM39-206ENST00000403542 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
RBM39-206ENST00000403542 SPINK7P58062 85 aa7.01□□□□□ -1.29
RBM39-206ENST00000403542 LOC101927531A0A1B0GV80 90 aa7□□□□□ -1.29
RBM39-206ENST00000403542 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
RBM39-206ENST00000403542 Q75L30 129 aa6.99□□□□□ -1.29
RBM39-206ENST00000403542 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
RBM39-206ENST00000403542 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
RBM39-206ENST00000403542 LINC01558Q9Y6Z2 57 aa6.94□□□□□ -1.3
RBM39-206ENST00000403542 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
RBM39-206ENST00000403542 LINC00313P59037 77 aa6.92□□□□□ -1.3
RBM39-206ENST00000403542 VPS13BQ7Z7G8 4022 aa6.92□□□□□ -1.3
RBM39-206ENST00000403542 KRTAP13-3Q3SY46 172 aa6.91□□□□□ -1.3
RBM39-206ENST00000403542 H3BS24 57 aa6.9□□□□□ -1.3
RBM39-206ENST00000403542 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
RBM39-206ENST00000403542 KRTAP13-2Q52LG2 175 aa6.9□□□□□ -1.3
RBM39-206ENST00000403542 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.31
RBM39-206ENST00000403542 IGKV2-30P06310 120 aa6.9□□□□□ -1.31
RBM39-206ENST00000403542 ATP11AUNQ6ZP68 121 aa6.9□□□□□ -1.31
RBM39-206ENST00000403542 ACYP2P14621 99 aa6.87□□□□□ -1.31
RBM39-206ENST00000403542 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
RBM39-206ENST00000403542 SSBP3-AS1Q7Z2R9 100 aa6.86□□□□□ -1.31
RBM39-206ENST00000403542 PKHD1P08F94 4074 aa6.85□□□□□ -1.31
RBM39-206ENST00000403542 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
RBM39-206ENST00000403542 A6NN06 94 aa6.85□□□□□ -1.31
RBM39-206ENST00000403542 PKD1P98161 4303 aa6.83□□□□□ -1.32
RBM39-206ENST00000403542 C8orf87E5RJ46 101 aa6.82□□□□□ -1.32
RBM39-206ENST00000403542 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
RBM39-206ENST00000403542 SPINK1P00995 79 aa6.81□□□□□ -1.32
RBM39-206ENST00000403542 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
RBM39-206ENST00000403542 A0A1B0GU69 56 aa6.79□□□□□ -1.32
RBM39-206ENST00000403542 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
RBM39-206ENST00000403542 PLA2G1BP04054 148 aaKnown RBP6.79□□□□□ -1.32
RBM39-206ENST00000403542 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
RBM39-206ENST00000403542 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
RBM39-206ENST00000403542 Q8N1X5 172 aa6.76□□□□□ -1.33
RBM39-206ENST00000403542 KRTAP16-1A8MUX0 517 aa6.75□□□□□ -1.33
RBM39-206ENST00000403542 KRTAP1-4P0C5Y4 121 aa6.75□□□□□ -1.33
RBM39-206ENST00000403542 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
RBM39-206ENST00000403542 FAT1Q14517 4588 aa6.75□□□□□ -1.33
RBM39-206ENST00000403542 TYMSOSQ8TAI1 123 aa6.74□□□□□ -1.33
RBM39-206ENST00000403542 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
RBM39-206ENST00000403542 C9orf92A6NGG3 77 aa6.69□□□□□ -1.34
RBM39-206ENST00000403542 Q6ZSA8 131 aa6.69□□□□□ -1.34
RBM39-206ENST00000403542 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
RBM39-206ENST00000403542 UQCR11O14957 56 aa6.63□□□□□ -1.35
RBM39-206ENST00000403542 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
RBM39-206ENST00000403542 LINC00304Q8N9R0 145 aa6.6□□□□□ -1.35
RBM39-206ENST00000403542 SPATA8Q6RVD6 105 aa6.59□□□□□ -1.35
RBM39-206ENST00000403542 FLG2Q5D862 2391 aaPredicted RBP6.59□□□□□ -1.35
RBM39-206ENST00000403542 SACSQ9NZJ4 4579 aa6.59□□□□□ -1.35
RBM39-206ENST00000403542 DMBT1Q9UGM3 2413 aaPredicted RBP6.54□□□□□ -1.36
RBM39-206ENST00000403542 MYCBP2O75592 4640 aa6.52□□□□□ -1.37
RBM39-206ENST00000403542 LRP1Q07954 4544 aaKnown RBP6.5□□□□□ -1.37
RBM39-206ENST00000403542 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
RBM39-206ENST00000403542 APOBP04114 4563 aaKnown RBP6.47□□□□□ -1.37
RBM39-206ENST00000403542 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
RBM39-206ENST00000403542 H0YAA0 97 aa6.44□□□□□ -1.38
RBM39-206ENST00000403542 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
RBM39-206ENST00000403542 HSPG2P98160 4391 aa6.4□□□□□ -1.38
RBM39-206ENST00000403542 PKHD1L1Q86WI1 4243 aa6.4□□□□□ -1.38
RBM39-206ENST00000403542 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
RBM39-206ENST00000403542 CRIPTQ9P021 101 aa6.39□□□□□ -1.39
RBM39-206ENST00000403542 A0A1B0GU33 70 aa6.39□□□□□ -1.39
RBM39-206ENST00000403542 A8MUU9 505 aa6.39□□□□□ -1.39
RBM39-206ENST00000403542 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
RBM39-206ENST00000403542 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
RBM39-206ENST00000403542 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
RBM39-206ENST00000403542 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
RBM39-206ENST00000403542 KRTAP21-3Q3LHN1 58 aa6.32□□□□□ -1.4
RBM39-206ENST00000403542 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
RBM39-206ENST00000403542 FAT3Q8TDW7 4589 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms