RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 PLA2G1BP04054 148 aaKnown RBP8.9□□□□□ -0.98
RPRD1A-202ENST00000399022 IGLV7-43P04211 117 aa8.89□□□□□ -0.99
RPRD1A-202ENST00000399022 OTOGQ6ZRI0 2925 aa8.88□□□□□ -0.99
RPRD1A-202ENST00000399022 Q8N1X5 172 aa8.88□□□□□ -0.99
RPRD1A-202ENST00000399022 FBN1P35555 2871 aaKnown RBP8.87□□□□□ -0.99
RPRD1A-202ENST00000399022 SPRR1BP22528 89 aa8.86□□□□□ -0.99
RPRD1A-202ENST00000399022 DMBT1Q9UGM3 2413 aaPredicted RBP8.85□□□□□ -0.99
RPRD1A-202ENST00000399022 PDZD2O15018 2839 aa8.85□□□□□ -0.99
RPRD1A-202ENST00000399022 NBPF19A0A087WUL8 3843 aa8.84□□□□□ -0.99
RPRD1A-202ENST00000399022 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
RPRD1A-202ENST00000399022 PANO1I0J062 215 aa8.82□□□□□ -1
RPRD1A-202ENST00000399022 ADM2Q7Z4H4 148 aa8.79□□□□□ -1
RPRD1A-202ENST00000399022 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
RPRD1A-202ENST00000399022 Q6ZR54 194 aa8.77□□□□□ -1
RPRD1A-202ENST00000399022 Q5W150 140 aa8.75□□□□□ -1.01
RPRD1A-202ENST00000399022 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
RPRD1A-202ENST00000399022 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
RPRD1A-202ENST00000399022 ZFHX3Q15911 3703 aa8.71□□□□□ -1.01
RPRD1A-202ENST00000399022 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
RPRD1A-202ENST00000399022 CRIPTQ9P021 101 aa8.7□□□□□ -1.02
RPRD1A-202ENST00000399022 A0A087X002 238 aa8.7□□□□□ -1.02
RPRD1A-202ENST00000399022 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
RPRD1A-202ENST00000399022 A0A1B0GU33 70 aa8.69□□□□□ -1.02
RPRD1A-202ENST00000399022 C9orf92A6NGG3 77 aa8.69□□□□□ -1.02
RPRD1A-202ENST00000399022 LINC00304Q8N9R0 145 aa8.69□□□□□ -1.02
RPRD1A-202ENST00000399022 DMAC1Q96GE9 116 aa8.69□□□□□ -1.02
RPRD1A-202ENST00000399022 PKD1L1Q8TDX9 2849 aa8.68□□□□□ -1.02
RPRD1A-202ENST00000399022 A0A0D9SG42 100 aa8.66□□□□□ -1.02
RPRD1A-202ENST00000399022 SPATA8Q6RVD6 105 aa8.64□□□□□ -1.03
RPRD1A-202ENST00000399022 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
RPRD1A-202ENST00000399022 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
RPRD1A-202ENST00000399022 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
RPRD1A-202ENST00000399022 VPS13CQ709C8 3753 aa8.55□□□□□ -1.04
RPRD1A-202ENST00000399022 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
RPRD1A-202ENST00000399022 TENM2Q9NT68 2774 aa8.54□□□□□ -1.04
RPRD1A-202ENST00000399022 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
RPRD1A-202ENST00000399022 TGP01266 2768 aa8.5□□□□□ -1.05
RPRD1A-202ENST00000399022 TRRAPQ9Y4A5 3859 aa8.46□□□□□ -1.05
RPRD1A-202ENST00000399022 KRTAP13-1Q8IUC0 172 aa8.42□□□□□ -1.06
RPRD1A-202ENST00000399022 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.07
RPRD1A-202ENST00000399022 H1FX-AS1Q4G0G2 97 aa8.37□□□□□ -1.07
RPRD1A-202ENST00000399022 ANK3Q12955 4377 aaKnown RBP8.34□□□□□ -1.07
RPRD1A-202ENST00000399022 ROMO1P60602 79 aa8.34□□□□□ -1.07
RPRD1A-202ENST00000399022 RPL37P61927 97 aaKnown RBP8.31□□□□□ -1.08
RPRD1A-202ENST00000399022 ZNF469Q96JG9 3925 aaPredicted RBP8.28□□□□□ -1.08
RPRD1A-202ENST00000399022 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
RPRD1A-202ENST00000399022 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.09
RPRD1A-202ENST00000399022 LUZP6Q538Z0 58 aa8.19□□□□□ -1.1
RPRD1A-202ENST00000399022 A8MUU9 505 aa8.19□□□□□ -1.1
RPRD1A-202ENST00000399022 J3QL48 77 aa8.17□□□□□ -1.1
RPRD1A-202ENST00000399022 NDUFAF8A1L188 74 aa8.17□□□□□ -1.1
RPRD1A-202ENST00000399022 FBN3Q75N90 2809 aa8.14□□□□□ -1.11
RPRD1A-202ENST00000399022 Q6ZSA8 131 aa8.13□□□□□ -1.11
RPRD1A-202ENST00000399022 KRTAP16-1A8MUX0 517 aa8.1□□□□□ -1.11
RPRD1A-202ENST00000399022 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
RPRD1A-202ENST00000399022 Q5VSD8 79 aa8.1□□□□□ -1.11
RPRD1A-202ENST00000399022 S4R3F8 94 aa8.09□□□□□ -1.11
RPRD1A-202ENST00000399022 H0YAA0 97 aa8.05□□□□□ -1.12
RPRD1A-202ENST00000399022 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
RPRD1A-202ENST00000399022 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
RPRD1A-202ENST00000399022 KRTAP13-3Q3SY46 172 aa7.98□□□□□ -1.13
RPRD1A-202ENST00000399022 MEGF8Q7Z7M0 2845 aa7.97□□□□□ -1.13
RPRD1A-202ENST00000399022 CAMK2N1Q7Z7J9 78 aa7.93□□□□□ -1.14
RPRD1A-202ENST00000399022 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
RPRD1A-202ENST00000399022 R4GN34 69 aa7.9□□□□□ -1.14
RPRD1A-202ENST00000399022 COL7A1Q02388 2944 aa7.9□□□□□ -1.14
RPRD1A-202ENST00000399022 AKAP9Q99996 3911 aa7.9□□□□□ -1.15
RPRD1A-202ENST00000399022 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
RPRD1A-202ENST00000399022 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
RPRD1A-202ENST00000399022 CSMD3Q7Z407 3707 aa7.86□□□□□ -1.15
RPRD1A-202ENST00000399022 M0QZ58 72 aa7.84□□□□□ -1.15
RPRD1A-202ENST00000399022 KRTAP21-3Q3LHN1 58 aa7.76□□□□□ -1.17
RPRD1A-202ENST00000399022 HUWE1Q7Z6Z7 4374 aaKnown RBP7.68□□□□□ -1.18
RPRD1A-202ENST00000399022 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
RPRD1A-202ENST00000399022 P0C880 135 aa7.6□□□□□ -1.19
RPRD1A-202ENST00000399022 XP32Q5T750 250 aa7.57□□□□□ -1.2
RPRD1A-202ENST00000399022 M0R2T5 61 aa7.56□□□□□ -1.2
RPRD1A-202ENST00000399022 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
RPRD1A-202ENST00000399022 PLAC4Q8WY50 150 aa7.55□□□□□ -1.2
RPRD1A-202ENST00000399022 A0A1B0GVY2 172 aa7.51□□□□□ -1.21
RPRD1A-202ENST00000399022 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
RPRD1A-202ENST00000399022 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
RPRD1A-202ENST00000399022 KRTAP10-8P60410 259 aa7.42□□□□□ -1.22
RPRD1A-202ENST00000399022 DNAH10Q8IVF4 4471 aa7.4□□□□□ -1.22
RPRD1A-202ENST00000399022 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
RPRD1A-202ENST00000399022 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
RPRD1A-202ENST00000399022 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
RPRD1A-202ENST00000399022 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
RPRD1A-202ENST00000399022 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
RPRD1A-202ENST00000399022 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
RPRD1A-202ENST00000399022 DNHD1Q96M86 4753 aa7.25□□□□□ -1.25
RPRD1A-202ENST00000399022 TNP1P09430 55 aa7.24□□□□□ -1.25
RPRD1A-202ENST00000399022 DNAH1Q9P2D7 4330 aa7.24□□□□□ -1.25
RPRD1A-202ENST00000399022 DNAH11Q96DT5 4516 aa7.23□□□□□ -1.25
RPRD1A-202ENST00000399022 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.25
RPRD1A-202ENST00000399022 STARD9Q9P2P6 4700 aa7.17□□□□□ -1.26
RPRD1A-202ENST00000399022 ANK2Q01484 3957 aa7.16□□□□□ -1.26
RPRD1A-202ENST00000399022 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
RPRD1A-202ENST00000399022 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
RPRD1A-202ENST00000399022 PRKDCP78527 4128 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms