RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 A0A1B0GU69 56 aa6.98□□□□□ -1.29
PUM3-202ENST00000397885 STARD9Q9P2P6 4700 aa6.97□□□□□ -1.29
PUM3-202ENST00000397885 Q96NJ1 140 aa6.96□□□□□ -1.29
PUM3-202ENST00000397885 MRPL34Q9BQ48 92 aaKnown RBP6.96□□□□□ -1.29
PUM3-202ENST00000397885 UQCR11O14957 56 aa6.96□□□□□ -1.3
PUM3-202ENST00000397885 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.3
PUM3-202ENST00000397885 TENM2Q9NT68 2774 aa6.95□□□□□ -1.3
PUM3-202ENST00000397885 CSMD3Q7Z407 3707 aa6.95□□□□□ -1.3
PUM3-202ENST00000397885 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
PUM3-202ENST00000397885 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
PUM3-202ENST00000397885 SACSQ9NZJ4 4579 aa6.94□□□□□ -1.3
PUM3-202ENST00000397885 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
PUM3-202ENST00000397885 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
PUM3-202ENST00000397885 LYSTQ99698 3801 aa6.91□□□□□ -1.3
PUM3-202ENST00000397885 LY6G6CO95867 125 aa6.91□□□□□ -1.3
PUM3-202ENST00000397885 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
PUM3-202ENST00000397885 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.3
PUM3-202ENST00000397885 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
PUM3-202ENST00000397885 KRTAP13-3Q3SY46 172 aa6.88□□□□□ -1.31
PUM3-202ENST00000397885 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
PUM3-202ENST00000397885 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
PUM3-202ENST00000397885 APLNQ9ULZ1 77 aa6.86□□□□□ -1.31
PUM3-202ENST00000397885 A0A096LNI7 61 aa6.85□□□□□ -1.31
PUM3-202ENST00000397885 ZNF861PO60384 105 aa6.85□□□□□ -1.31
PUM3-202ENST00000397885 C1orf134Q5TEV5 83 aa6.83□□□□□ -1.32
PUM3-202ENST00000397885 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
PUM3-202ENST00000397885 Q5W150 140 aa6.81□□□□□ -1.32
PUM3-202ENST00000397885 EPPK1P58107 5090 aaKnown RBP6.8□□□□□ -1.32
PUM3-202ENST00000397885 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
PUM3-202ENST00000397885 ROMO1P60602 79 aa6.79□□□□□ -1.32
PUM3-202ENST00000397885 KRTAP13-1Q8IUC0 172 aa6.78□□□□□ -1.32
PUM3-202ENST00000397885 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
PUM3-202ENST00000397885 ZNF706Q9Y5V0 76 aaPredicted RBP6.77□□□□□ -1.33
PUM3-202ENST00000397885 LINC00483Q53H64 154 aa6.77□□□□□ -1.33
PUM3-202ENST00000397885 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
PUM3-202ENST00000397885 UBE2DNLQ8IWF7 75 aa6.76□□□□□ -1.33
PUM3-202ENST00000397885 CHTF8P0CG12 524 aa6.75□□□□□ -1.33
PUM3-202ENST00000397885 KRTAP25-1Q3LHN0 102 aa6.75□□□□□ -1.33
PUM3-202ENST00000397885 KRTAP1-5Q9BYS1 174 aa6.75□□□□□ -1.33
PUM3-202ENST00000397885 IGLV7-43P04211 117 aa6.75□□□□□ -1.33
PUM3-202ENST00000397885 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
PUM3-202ENST00000397885 IGLV9-49A0A0B4J1Y8 123 aa6.74□□□□□ -1.33
PUM3-202ENST00000397885 DNAH6Q9C0G6 4158 aa6.73□□□□□ -1.33
PUM3-202ENST00000397885 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
PUM3-202ENST00000397885 DNAH10Q8IVF4 4471 aa6.71□□□□□ -1.34
PUM3-202ENST00000397885 KMT2AQ03164 3969 aa6.7□□□□□ -1.34
PUM3-202ENST00000397885 IGKV2-30P06310 120 aa6.7□□□□□ -1.34
PUM3-202ENST00000397885 A8MUU9 505 aa6.67□□□□□ -1.34
PUM3-202ENST00000397885 A0A1B0GVY2 172 aa6.64□□□□□ -1.35
PUM3-202ENST00000397885 IGLV5-52A0A0A0MRZ9 124 aa6.64□□□□□ -1.35
PUM3-202ENST00000397885 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
PUM3-202ENST00000397885 NBDYA0A0U1RRE5 68 aa6.63□□□□□ -1.35
PUM3-202ENST00000397885 FRAS1Q86XX4 4008 aa6.61□□□□□ -1.35
PUM3-202ENST00000397885 LINC00304Q8N9R0 145 aa6.6□□□□□ -1.35
PUM3-202ENST00000397885 SPACA4Q8TDM5 124 aa6.59□□□□□ -1.35
PUM3-202ENST00000397885 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
PUM3-202ENST00000397885 IGKV2D-30A0A075B6S6 120 aa6.58□□□□□ -1.36
PUM3-202ENST00000397885 SPINK6Q6UWN8 80 aa6.58□□□□□ -1.36
PUM3-202ENST00000397885 HECTD4Q9Y4D8 3996 aa6.58□□□□□ -1.36
PUM3-202ENST00000397885 PANO1I0J062 215 aa6.58□□□□□ -1.36
PUM3-202ENST00000397885 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
PUM3-202ENST00000397885 Q6ZRN7 208 aaPredicted RBP6.56□□□□□ -1.36
PUM3-202ENST00000397885 FAT2Q9NYQ8 4349 aa6.56□□□□□ -1.36
PUM3-202ENST00000397885 HERC2O95714 4834 aa6.56□□□□□ -1.36
PUM3-202ENST00000397885 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.55□□□□□ -1.36
PUM3-202ENST00000397885 P0C880 135 aa6.54□□□□□ -1.36
PUM3-202ENST00000397885 H0YAA0 97 aa6.54□□□□□ -1.36
PUM3-202ENST00000397885 Q6ZSA8 131 aa6.53□□□□□ -1.36
PUM3-202ENST00000397885 PKD1P98161 4303 aa6.53□□□□□ -1.36
PUM3-202ENST00000397885 DNAH11Q96DT5 4516 aa6.52□□□□□ -1.37
PUM3-202ENST00000397885 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
PUM3-202ENST00000397885 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
PUM3-202ENST00000397885 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
PUM3-202ENST00000397885 A0A087WTM6 91 aa6.49□□□□□ -1.37
PUM3-202ENST00000397885 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
PUM3-202ENST00000397885 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
PUM3-202ENST00000397885 K7ERS5 55 aa6.45□□□□□ -1.38
PUM3-202ENST00000397885 ANAPC11Q9NYG5 84 aa6.45□□□□□ -1.38
PUM3-202ENST00000397885 A0A1B0GU33 70 aa6.45□□□□□ -1.38
PUM3-202ENST00000397885 KRTAP17-1Q9BYP8 105 aa6.45□□□□□ -1.38
PUM3-202ENST00000397885 KRTAP10-2P60368 255 aa6.44□□□□□ -1.38
PUM3-202ENST00000397885 RYR1P21817 5038 aa6.44□□□□□ -1.38
PUM3-202ENST00000397885 CIRBP-AS1Q8TBR5 109 aa6.44□□□□□ -1.38
PUM3-202ENST00000397885 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
PUM3-202ENST00000397885 SPINK1P00995 79 aa6.42□□□□□ -1.38
PUM3-202ENST00000397885 H1FX-AS1Q4G0G2 97 aa6.41□□□□□ -1.38
PUM3-202ENST00000397885 Q8N1X5 172 aa6.39□□□□□ -1.39
PUM3-202ENST00000397885 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
PUM3-202ENST00000397885 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
PUM3-202ENST00000397885 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
PUM3-202ENST00000397885 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
PUM3-202ENST00000397885 KRTAP10-1P60331 282 aa6.34□□□□□ -1.39
PUM3-202ENST00000397885 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
PUM3-202ENST00000397885 HSPG2P98160 4391 aa6.34□□□□□ -1.39
PUM3-202ENST00000397885 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.4
PUM3-202ENST00000397885 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
PUM3-202ENST00000397885 SPINT4Q6UDR6 99 aa6.33□□□□□ -1.4
PUM3-202ENST00000397885 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
PUM3-202ENST00000397885 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
PUM3-202ENST00000397885 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms