RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 A0A0D9SG42 100 aa3.33□□□□□ -1.88
PTPRD-205ENST00000397611 Q6ZR54 194 aa3.33□□□□□ -1.88
PTPRD-205ENST00000397611 SMG1Q96Q15 3661 aaKnown RBP3.33□□□□□ -1.88
PTPRD-205ENST00000397611 ASPMQ8IZT6 3477 aa3.32□□□□□ -1.88
PTPRD-205ENST00000397611 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
PTPRD-205ENST00000397611 ADM2Q7Z4H4 148 aa3.31□□□□□ -1.88
PTPRD-205ENST00000397611 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
PTPRD-205ENST00000397611 A0A087X002 238 aa3.3□□□□□ -1.88
PTPRD-205ENST00000397611 TYMSOSQ8TAI1 123 aa3.3□□□□□ -1.88
PTPRD-205ENST00000397611 ZNF861PO60384 105 aa3.3□□□□□ -1.88
PTPRD-205ENST00000397611 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
PTPRD-205ENST00000397611 PLAC8Q9NZF1 115 aa3.28□□□□□ -1.88
PTPRD-205ENST00000397611 PSORS1C2Q9UIG4 136 aa3.28□□□□□ -1.88
PTPRD-205ENST00000397611 A0A1B0GU33 70 aa3.28□□□□□ -1.88
PTPRD-205ENST00000397611 KRTAP21-3Q3LHN1 58 aa3.28□□□□□ -1.88
PTPRD-205ENST00000397611 TGP01266 2768 aa3.28□□□□□ -1.88
PTPRD-205ENST00000397611 Q5W150 140 aa3.27□□□□□ -1.89
PTPRD-205ENST00000397611 BSNQ9UPA5 3926 aa3.27□□□□□ -1.89
PTPRD-205ENST00000397611 IGLV7-43P04211 117 aa3.26□□□□□ -1.89
PTPRD-205ENST00000397611 A0A087WTM6 91 aa3.25□□□□□ -1.89
PTPRD-205ENST00000397611 SRRM2Q9UQ35 2752 aaKnown RBP3.25□□□□□ -1.89
PTPRD-205ENST00000397611 DMAC1Q96GE9 116 aa3.23□□□□□ -1.89
PTPRD-205ENST00000397611 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.23□□□□□ -1.89
PTPRD-205ENST00000397611 SPENQ96T58 3664 aaKnown RBP3.22□□□□□ -1.89
PTPRD-205ENST00000397611 KRTAP13-3Q3SY46 172 aa3.22□□□□□ -1.89
PTPRD-205ENST00000397611 SPATA8Q6RVD6 105 aa3.22□□□□□ -1.89
PTPRD-205ENST00000397611 LINC00304Q8N9R0 145 aa3.22□□□□□ -1.89
PTPRD-205ENST00000397611 MEGF8Q7Z7M0 2845 aa3.22□□□□□ -1.89
PTPRD-205ENST00000397611 KRTAP11-1Q8IUC1 163 aa3.22□□□□□ -1.89
PTPRD-205ENST00000397611 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
PTPRD-205ENST00000397611 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
PTPRD-205ENST00000397611 ANK3Q12955 4377 aaKnown RBP3.19□□□□□ -1.9
PTPRD-205ENST00000397611 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
PTPRD-205ENST00000397611 FBN3Q75N90 2809 aa3.19□□□□□ -1.9
PTPRD-205ENST00000397611 SVEP1Q4LDE5 3571 aa3.19□□□□□ -1.9
PTPRD-205ENST00000397611 ROMO1P60602 79 aa3.19□□□□□ -1.9
PTPRD-205ENST00000397611 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
PTPRD-205ENST00000397611 PANO1I0J062 215 aa3.17□□□□□ -1.9
PTPRD-205ENST00000397611 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
PTPRD-205ENST00000397611 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
PTPRD-205ENST00000397611 Q6ZSA8 131 aa3.16□□□□□ -1.9
PTPRD-205ENST00000397611 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
PTPRD-205ENST00000397611 CSMD1Q96PZ7 3565 aa3.14□□□□□ -1.91
PTPRD-205ENST00000397611 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
PTPRD-205ENST00000397611 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
PTPRD-205ENST00000397611 FLG2Q5D862 2391 aaPredicted RBP3.13□□□□□ -1.91
PTPRD-205ENST00000397611 RPL37P61927 97 aaKnown RBP3.13□□□□□ -1.91
PTPRD-205ENST00000397611 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
PTPRD-205ENST00000397611 A8MUU9 505 aa3.1□□□□□ -1.91
PTPRD-205ENST00000397611 S4R3F8 94 aa3.09□□□□□ -1.91
PTPRD-205ENST00000397611 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
PTPRD-205ENST00000397611 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
PTPRD-205ENST00000397611 KRTAP1-4P0C5Y4 121 aa3.07□□□□□ -1.92
PTPRD-205ENST00000397611 RYR1P21817 5038 aa3.07□□□□□ -1.92
PTPRD-205ENST00000397611 SEC61BP60468 96 aaKnown RBP3.06□□□□□ -1.92
PTPRD-205ENST00000397611 CSMD2Q7Z408 3487 aa3.06□□□□□ -1.92
PTPRD-205ENST00000397611 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
PTPRD-205ENST00000397611 COL7A1Q02388 2944 aa3.05□□□□□ -1.92
PTPRD-205ENST00000397611 TRRAPQ9Y4A5 3859 aa3.05□□□□□ -1.92
PTPRD-205ENST00000397611 Q5VSD8 79 aa3.03□□□□□ -1.93
PTPRD-205ENST00000397611 C20orf166-AS1Q96NR2 134 aa3.02□□□□□ -1.93
PTPRD-205ENST00000397611 M0R2T5 61 aa3.01□□□□□ -1.93
PTPRD-205ENST00000397611 CUBNO60494 3623 aa3□□□□□ -1.93
PTPRD-205ENST00000397611 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
PTPRD-205ENST00000397611 M0QZ58 72 aa2.99□□□□□ -1.93
PTPRD-205ENST00000397611 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
PTPRD-205ENST00000397611 R4GN34 69 aa2.99□□□□□ -1.93
PTPRD-205ENST00000397611 KRTAP10-2P60368 255 aa2.99□□□□□ -1.93
PTPRD-205ENST00000397611 PLECQ15149 4684 aaKnown RBP2.98□□□□□ -1.93
PTPRD-205ENST00000397611 AKAP9Q99996 3911 aa2.98□□□□□ -1.93
PTPRD-205ENST00000397611 H0YAA0 97 aa2.98□□□□□ -1.93
PTPRD-205ENST00000397611 ZNF469Q96JG9 3925 aaPredicted RBP2.96□□□□□ -1.94
PTPRD-205ENST00000397611 VPS13DQ5THJ4 4388 aa2.93□□□□□ -1.94
PTPRD-205ENST00000397611 NBPF19A0A087WUL8 3843 aa2.92□□□□□ -1.94
PTPRD-205ENST00000397611 VPS13CQ709C8 3753 aa2.92□□□□□ -1.94
PTPRD-205ENST00000397611 DNAH17Q9UFH2 4485 aa2.91□□□□□ -1.94
PTPRD-205ENST00000397611 ZFHX3Q15911 3703 aa2.91□□□□□ -1.94
PTPRD-205ENST00000397611 PLAC4Q8WY50 150 aa2.9□□□□□ -1.95
PTPRD-205ENST00000397611 DNAH9Q9NYC9 4486 aa2.89□□□□□ -1.95
PTPRD-205ENST00000397611 KRTAP10-4P60372 401 aaPredicted RBP2.88□□□□□ -1.95
PTPRD-205ENST00000397611 DNAH10Q8IVF4 4471 aa2.88□□□□□ -1.95
PTPRD-205ENST00000397611 DNAH3Q8TD57 4116 aa2.88□□□□□ -1.95
PTPRD-205ENST00000397611 HUWE1Q7Z6Z7 4374 aaKnown RBP2.88□□□□□ -1.95
PTPRD-205ENST00000397611 DNAH1Q9P2D7 4330 aa2.87□□□□□ -1.95
PTPRD-205ENST00000397611 P0C880 135 aa2.86□□□□□ -1.95
PTPRD-205ENST00000397611 KRTAP3-1Q9BYR8 98 aa2.86□□□□□ -1.95
PTPRD-205ENST00000397611 LRP1BQ9NZR2 4599 aa2.85□□□□□ -1.95
PTPRD-205ENST00000397611 DNHD1Q96M86 4753 aa2.85□□□□□ -1.95
PTPRD-205ENST00000397611 DNAH11Q96DT5 4516 aa2.84□□□□□ -1.95
PTPRD-205ENST00000397611 A0A1B0GVY2 172 aa2.84□□□□□ -1.96
PTPRD-205ENST00000397611 KRTAP10-8P60410 259 aa2.84□□□□□ -1.96
PTPRD-205ENST00000397611 DNAH2Q9P225 4427 aa2.83□□□□□ -1.96
PTPRD-205ENST00000397611 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
PTPRD-205ENST00000397611 DYNC2H1Q8NCM8 4307 aaKnown RBP2.82□□□□□ -1.96
PTPRD-205ENST00000397611 TPRXLQ17RH7 258 aa2.82□□□□□ -1.96
PTPRD-205ENST00000397611 KIAA1109Q2LD37 5005 aa2.81□□□□□ -1.96
PTPRD-205ENST00000397611 STARD9Q9P2P6 4700 aa2.8□□□□□ -1.96
PTPRD-205ENST00000397611 DYNC1H1Q14204 4646 aaKnown RBP2.79□□□□□ -1.96
PTPRD-205ENST00000397611 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
PTPRD-205ENST00000397611 ANK2Q01484 3957 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms