RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RBM12B-AS1Q9P1G2 102 aa6.18□□□□□ -1.42
CPSF1P1-201ENST00000397477 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 Q96NJ1 140 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 LINC00483Q53H64 154 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
CPSF1P1-201ENST00000397477 COA5Q86WW8 74 aa6.16□□□□□ -1.42
CPSF1P1-201ENST00000397477 LCE6AA0A183 80 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 LINC00313P59037 77 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 Q1T7F1 81 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.42
CPSF1P1-201ENST00000397477 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
CPSF1P1-201ENST00000397477 IGKV2-30P06310 120 aa6.15□□□□□ -1.43
CPSF1P1-201ENST00000397477 KTN1-AS1Q86SY8 53 aa6.15□□□□□ -1.43
CPSF1P1-201ENST00000397477 H3BPC8 53 aa6.14□□□□□ -1.43
CPSF1P1-201ENST00000397477 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
CPSF1P1-201ENST00000397477 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
CPSF1P1-201ENST00000397477 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
CPSF1P1-201ENST00000397477 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
CPSF1P1-201ENST00000397477 Q5W150 140 aa6.1□□□□□ -1.43
CPSF1P1-201ENST00000397477 Q5VV11 94 aa6.09□□□□□ -1.43
CPSF1P1-201ENST00000397477 PRR26Q8N8Z3 221 aa6.08□□□□□ -1.44
CPSF1P1-201ENST00000397477 LIMD2Q9BT23 127 aa6.08□□□□□ -1.44
CPSF1P1-201ENST00000397477 SPINK1P00995 79 aa6.07□□□□□ -1.44
CPSF1P1-201ENST00000397477 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
CPSF1P1-201ENST00000397477 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
CPSF1P1-201ENST00000397477 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
CPSF1P1-201ENST00000397477 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
CPSF1P1-201ENST00000397477 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
CPSF1P1-201ENST00000397477 DMBT1Q9UGM3 2413 aaPredicted RBP6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 DNAH11Q96DT5 4516 aa6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
CPSF1P1-201ENST00000397477 ATP11AUNQ6ZP68 121 aa6.03□□□□□ -1.44
CPSF1P1-201ENST00000397477 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
CPSF1P1-201ENST00000397477 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
CPSF1P1-201ENST00000397477 HRES1P13985 223 aa6.02□□□□□ -1.45
CPSF1P1-201ENST00000397477 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH2Q9P225 4427 aa6.01□□□□□ -1.45
CPSF1P1-201ENST00000397477 LCA10Q71F78 164 aa6□□□□□ -1.45
CPSF1P1-201ENST00000397477 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
CPSF1P1-201ENST00000397477 LINC00304Q8N9R0 145 aa6□□□□□ -1.45
CPSF1P1-201ENST00000397477 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
CPSF1P1-201ENST00000397477 ACYP2P14621 99 aa5.99□□□□□ -1.45
CPSF1P1-201ENST00000397477 H3BS24 57 aa5.98□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
CPSF1P1-201ENST00000397477 Q8N1X5 172 aa5.97□□□□□ -1.45
CPSF1P1-201ENST00000397477 HECTD4Q9Y4D8 3996 aa5.96□□□□□ -1.45
CPSF1P1-201ENST00000397477 DNAH17Q9UFH2 4485 aa5.96□□□□□ -1.46
CPSF1P1-201ENST00000397477 ASB16-AS1Q495Z4 193 aa5.95□□□□□ -1.46
CPSF1P1-201ENST00000397477 KRTAP1-4P0C5Y4 121 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 KRTAP21-3Q3LHN1 58 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 Q6ZSA8 131 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
CPSF1P1-201ENST00000397477 DYNC2H1Q8NCM8 4307 aaKnown RBP5.93□□□□□ -1.46
CPSF1P1-201ENST00000397477 LRP1BQ9NZR2 4599 aa5.92□□□□□ -1.46
CPSF1P1-201ENST00000397477 Q75L30 129 aa5.92□□□□□ -1.46
CPSF1P1-201ENST00000397477 A6NN06 94 aa5.91□□□□□ -1.46
CPSF1P1-201ENST00000397477 SPINK7P58062 85 aa5.91□□□□□ -1.46
CPSF1P1-201ENST00000397477 A0A1B0GU69 56 aa5.9□□□□□ -1.46
CPSF1P1-201ENST00000397477 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
CPSF1P1-201ENST00000397477 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
CPSF1P1-201ENST00000397477 LINC01558Q9Y6Z2 57 aa5.85□□□□□ -1.47
CPSF1P1-201ENST00000397477 DNAH5Q8TE73 4624 aa5.84□□□□□ -1.47
CPSF1P1-201ENST00000397477 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
CPSF1P1-201ENST00000397477 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
CPSF1P1-201ENST00000397477 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
CPSF1P1-201ENST00000397477 FAT1Q14517 4588 aa5.8□□□□□ -1.48
CPSF1P1-201ENST00000397477 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
CPSF1P1-201ENST00000397477 VPS13BQ7Z7G8 4022 aa5.79□□□□□ -1.48
CPSF1P1-201ENST00000397477 PKHD1P08F94 4074 aa5.76□□□□□ -1.49
CPSF1P1-201ENST00000397477 ALMS1Q8TCU4 4167 aa5.75□□□□□ -1.49
CPSF1P1-201ENST00000397477 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
CPSF1P1-201ENST00000397477 UQCR11O14957 56 aa5.72□□□□□ -1.49
CPSF1P1-201ENST00000397477 Q5VSD8 79 aa5.71□□□□□ -1.49
CPSF1P1-201ENST00000397477 CSAG1Q6PB30 78 aa5.71□□□□□ -1.49
CPSF1P1-201ENST00000397477 DYNC1H1Q14204 4646 aaKnown RBP5.69□□□□□ -1.5
CPSF1P1-201ENST00000397477 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
CPSF1P1-201ENST00000397477 A0A1B0GVY2 172 aa5.67□□□□□ -1.5
CPSF1P1-201ENST00000397477 PKD1P98161 4303 aa5.64□□□□□ -1.51
CPSF1P1-201ENST00000397477 SACSQ9NZJ4 4579 aa5.63□□□□□ -1.51
CPSF1P1-201ENST00000397477 RPS29P62273 56 aaKnown RBP5.61□□□□□ -1.51
CPSF1P1-201ENST00000397477 A8MUU9 505 aa5.6□□□□□ -1.51
CPSF1P1-201ENST00000397477 C20orf166-AS1Q96NR2 134 aa5.59□□□□□ -1.52
CPSF1P1-201ENST00000397477 MYCBP2O75592 4640 aa5.58□□□□□ -1.52
CPSF1P1-201ENST00000397477 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
CPSF1P1-201ENST00000397477 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
CPSF1P1-201ENST00000397477 A0A1B0GU33 70 aa5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 A0A0D9SG42 100 aa5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
CPSF1P1-201ENST00000397477 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
CPSF1P1-201ENST00000397477 CRIPTQ9P021 101 aa5.54□□□□□ -1.52
CPSF1P1-201ENST00000397477 COX6B2Q6YFQ2 88 aa5.53□□□□□ -1.52
CPSF1P1-201ENST00000397477 KRTAP3-1Q9BYR8 98 aa5.51□□□□□ -1.53
CPSF1P1-201ENST00000397477 K7ERS5 55 aa5.49□□□□□ -1.53
CPSF1P1-201ENST00000397477 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
CPSF1P1-201ENST00000397477 XP32Q5T750 250 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms