RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CIRBP-AS1Q8TBR5 109 aa5.25□□□□□ -1.57
NDE1-202ENST00000396355 DNAH10Q8IVF4 4471 aa5.25□□□□□ -1.57
NDE1-202ENST00000396355 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
NDE1-202ENST00000396355 MRPL34Q9BQ48 92 aaKnown RBP5.25□□□□□ -1.57
NDE1-202ENST00000396355 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
NDE1-202ENST00000396355 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
NDE1-202ENST00000396355 GVQW2A0A096LPI5 108 aaPredicted RBP5.23□□□□□ -1.57
NDE1-202ENST00000396355 KRTAP26-1Q6PEX3 210 aa5.22□□□□□ -1.57
NDE1-202ENST00000396355 HUWE1Q7Z6Z7 4374 aaKnown RBP5.21□□□□□ -1.57
NDE1-202ENST00000396355 DNAH9Q9NYC9 4486 aa5.21□□□□□ -1.58
NDE1-202ENST00000396355 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
NDE1-202ENST00000396355 C15orf56Q8N910 161 aa5.19□□□□□ -1.58
NDE1-202ENST00000396355 CHTF8P0CG12 524 aa5.18□□□□□ -1.58
NDE1-202ENST00000396355 DNAH7Q8WXX0 4024 aa5.18□□□□□ -1.58
NDE1-202ENST00000396355 MMP24-AS1A0A0U1RRL7 71 aa5.18□□□□□ -1.58
NDE1-202ENST00000396355 LINC01556Q5JQF7 62 aa5.17□□□□□ -1.58
NDE1-202ENST00000396355 ANAPC11Q9NYG5 84 aa5.17□□□□□ -1.58
NDE1-202ENST00000396355 KMT2CQ8NEZ4 4911 aaKnown RBP5.17□□□□□ -1.58
NDE1-202ENST00000396355 A0A0D9SG42 100 aa5.17□□□□□ -1.58
NDE1-202ENST00000396355 LUZP6Q538Z0 58 aa5.17□□□□□ -1.58
NDE1-202ENST00000396355 Q8N1X5 172 aa5.16□□□□□ -1.58
NDE1-202ENST00000396355 IGLV5-37A0A075B6J1 123 aa5.16□□□□□ -1.58
NDE1-202ENST00000396355 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
NDE1-202ENST00000396355 A0A1B0GVX0 72 aa5.15□□□□□ -1.59
NDE1-202ENST00000396355 C14orf177Q52M58 125 aa5.15□□□□□ -1.59
NDE1-202ENST00000396355 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.59
NDE1-202ENST00000396355 KRTAP29-1A8MX34 341 aaPredicted RBP5.14□□□□□ -1.59
NDE1-202ENST00000396355 H3BNG1 76 aa5.13□□□□□ -1.59
NDE1-202ENST00000396355 APLNQ9ULZ1 77 aa5.13□□□□□ -1.59
NDE1-202ENST00000396355 A8MUU9 505 aa5.11□□□□□ -1.59
NDE1-202ENST00000396355 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.59
NDE1-202ENST00000396355 TNP2Q05952 138 aa5.09□□□□□ -1.59
NDE1-202ENST00000396355 KRTAP7-1Q8IUC3 87 aa5.09□□□□□ -1.59
NDE1-202ENST00000396355 ASB16-AS1Q495Z4 193 aa5.09□□□□□ -1.6
NDE1-202ENST00000396355 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.6
NDE1-202ENST00000396355 ZNF861PO60384 105 aa5.07□□□□□ -1.6
NDE1-202ENST00000396355 A0A1B0GU33 70 aa5.07□□□□□ -1.6
NDE1-202ENST00000396355 FAM229AH3BQW9 127 aa5.07□□□□□ -1.6
NDE1-202ENST00000396355 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
NDE1-202ENST00000396355 RYR3Q15413 4870 aa5.06□□□□□ -1.6
NDE1-202ENST00000396355 DMAC1Q96GE9 116 aa5.06□□□□□ -1.6
NDE1-202ENST00000396355 PLECQ15149 4684 aaKnown RBP5.06□□□□□ -1.6
NDE1-202ENST00000396355 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
NDE1-202ENST00000396355 IGLV7-43P04211 117 aa5.05□□□□□ -1.6
NDE1-202ENST00000396355 SPACA4Q8TDM5 124 aa5.05□□□□□ -1.6
NDE1-202ENST00000396355 A0A087X002 238 aa5.05□□□□□ -1.6
NDE1-202ENST00000396355 NOTCH2NLQ7Z3S9 236 aa5.05□□□□□ -1.6
NDE1-202ENST00000396355 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
NDE1-202ENST00000396355 C20orf166-AS1Q96NR2 134 aa5.04□□□□□ -1.6
NDE1-202ENST00000396355 Q5W150 140 aa5.04□□□□□ -1.6
NDE1-202ENST00000396355 J3QL48 77 aa5.03□□□□□ -1.6
NDE1-202ENST00000396355 LINC00483Q53H64 154 aa5.03□□□□□ -1.6
NDE1-202ENST00000396355 BIRC6Q9NR09 4857 aa5.03□□□□□ -1.6
NDE1-202ENST00000396355 IGLV5-52A0A0A0MRZ9 124 aa5.02□□□□□ -1.61
NDE1-202ENST00000396355 FRAS1Q86XX4 4008 aa5.02□□□□□ -1.61
NDE1-202ENST00000396355 SPRR1AP35321 89 aa5.02□□□□□ -1.61
NDE1-202ENST00000396355 PLA2G2DQ9UNK4 145 aa5□□□□□ -1.61
NDE1-202ENST00000396355 KRTAP1-5Q9BYS1 174 aa5□□□□□ -1.61
NDE1-202ENST00000396355 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
NDE1-202ENST00000396355 NBDYA0A0U1RRE5 68 aa4.99□□□□□ -1.61
NDE1-202ENST00000396355 PSORS1C2Q9UIG4 136 aa4.99□□□□□ -1.61
NDE1-202ENST00000396355 Q96NJ1 140 aa4.98□□□□□ -1.61
NDE1-202ENST00000396355 LINC00304Q8N9R0 145 aa4.98□□□□□ -1.61
NDE1-202ENST00000396355 PLAC8Q9NZF1 115 aa4.97□□□□□ -1.61
NDE1-202ENST00000396355 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
NDE1-202ENST00000396355 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
NDE1-202ENST00000396355 HECTD4Q9Y4D8 3996 aa4.96□□□□□ -1.61
NDE1-202ENST00000396355 SMR3BP02814 79 aaPredicted RBP4.96□□□□□ -1.62
NDE1-202ENST00000396355 HYDINQ4G0P3 5121 aa4.95□□□□□ -1.62
NDE1-202ENST00000396355 DNAH2Q9P225 4427 aa4.95□□□□□ -1.62
NDE1-202ENST00000396355 P0C880 135 aa4.95□□□□□ -1.62
NDE1-202ENST00000396355 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
NDE1-202ENST00000396355 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
NDE1-202ENST00000396355 VPS13DQ5THJ4 4388 aa4.92□□□□□ -1.62
NDE1-202ENST00000396355 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
NDE1-202ENST00000396355 RYR2Q92736 4967 aa4.91□□□□□ -1.62
NDE1-202ENST00000396355 DNAH17Q9UFH2 4485 aa4.89□□□□□ -1.63
NDE1-202ENST00000396355 SACSQ9NZJ4 4579 aa4.87□□□□□ -1.63
NDE1-202ENST00000396355 DNAH6Q9C0G6 4158 aa4.87□□□□□ -1.63
NDE1-202ENST00000396355 A0A087WTM6 91 aa4.87□□□□□ -1.63
NDE1-202ENST00000396355 PANO1I0J062 215 aa4.87□□□□□ -1.63
NDE1-202ENST00000396355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.87□□□□□ -1.63
NDE1-202ENST00000396355 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
NDE1-202ENST00000396355 Q5VSD8 79 aa4.86□□□□□ -1.63
NDE1-202ENST00000396355 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
NDE1-202ENST00000396355 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
NDE1-202ENST00000396355 KRTAP10-2P60368 255 aa4.84□□□□□ -1.64
NDE1-202ENST00000396355 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
NDE1-202ENST00000396355 RYR1P21817 5038 aa4.83□□□□□ -1.64
NDE1-202ENST00000396355 C9orf92A6NGG3 77 aa4.83□□□□□ -1.64
NDE1-202ENST00000396355 RPL37P61927 97 aaKnown RBP4.83□□□□□ -1.64
NDE1-202ENST00000396355 Q6ZSA8 131 aa4.83□□□□□ -1.64
NDE1-202ENST00000396355 TYMSOSQ8TAI1 123 aa4.83□□□□□ -1.64
NDE1-202ENST00000396355 A0A1B0GVY2 172 aa4.83□□□□□ -1.64
NDE1-202ENST00000396355 Q6ZRN7 208 aaPredicted RBP4.82□□□□□ -1.64
NDE1-202ENST00000396355 H0YAA0 97 aa4.81□□□□□ -1.64
NDE1-202ENST00000396355 DNAH11Q96DT5 4516 aa4.81□□□□□ -1.64
NDE1-202ENST00000396355 KRTAP13-1Q8IUC0 172 aa4.8□□□□□ -1.64
NDE1-202ENST00000396355 SPRR1BP22528 89 aa4.8□□□□□ -1.64
NDE1-202ENST00000396355 DNAH5Q8TE73 4624 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms