RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.51
NDE1-201ENST00000396354 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
NDE1-201ENST00000396354 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
NDE1-201ENST00000396354 SPAG11AQ6PDA7 123 aa5.64□□□□□ -1.51
NDE1-201ENST00000396354 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
NDE1-201ENST00000396354 LINC00472Q9H8W2 130 aa5.63□□□□□ -1.51
NDE1-201ENST00000396354 SACSQ9NZJ4 4579 aa5.63□□□□□ -1.51
NDE1-201ENST00000396354 PSORS1C2Q9UIG4 136 aa5.62□□□□□ -1.51
NDE1-201ENST00000396354 A0A1B0GW54 56 aa5.62□□□□□ -1.51
NDE1-201ENST00000396354 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
NDE1-201ENST00000396354 LY6G6CO95867 125 aa5.61□□□□□ -1.51
NDE1-201ENST00000396354 RBM12B-AS1Q9P1G2 102 aa5.61□□□□□ -1.51
NDE1-201ENST00000396354 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
NDE1-201ENST00000396354 LCE6AA0A183 80 aa5.6□□□□□ -1.51
NDE1-201ENST00000396354 RTL8CO15255 209 aa5.6□□□□□ -1.51
NDE1-201ENST00000396354 A0A087WTM6 91 aa5.59□□□□□ -1.51
NDE1-201ENST00000396354 VPS13BQ7Z7G8 4022 aa5.59□□□□□ -1.51
NDE1-201ENST00000396354 A6NED7 52 aa5.59□□□□□ -1.51
NDE1-201ENST00000396354 Q6ZR54 194 aa5.58□□□□□ -1.52
NDE1-201ENST00000396354 COA5Q86WW8 74 aa5.58□□□□□ -1.52
NDE1-201ENST00000396354 SPACA4Q8TDM5 124 aa5.58□□□□□ -1.52
NDE1-201ENST00000396354 Q1T7F1 81 aa5.58□□□□□ -1.52
NDE1-201ENST00000396354 KRTAP13-1Q8IUC0 172 aa5.58□□□□□ -1.52
NDE1-201ENST00000396354 IGLV8-61A0A075B6I0 122 aa5.57□□□□□ -1.52
NDE1-201ENST00000396354 IGLV5-52A0A0A0MRZ9 124 aa5.57□□□□□ -1.52
NDE1-201ENST00000396354 C8orf17Q9NRJ1 99 aa5.56□□□□□ -1.52
NDE1-201ENST00000396354 Q5VV11 94 aa5.54□□□□□ -1.52
NDE1-201ENST00000396354 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
NDE1-201ENST00000396354 PRR26Q8N8Z3 221 aa5.53□□□□□ -1.52
NDE1-201ENST00000396354 CYP4F30PQ9H0H9 118 aa5.53□□□□□ -1.52
NDE1-201ENST00000396354 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
NDE1-201ENST00000396354 Q96NJ1 140 aa5.53□□□□□ -1.52
NDE1-201ENST00000396354 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
NDE1-201ENST00000396354 SPRR1BP22528 89 aa5.52□□□□□ -1.53
NDE1-201ENST00000396354 KMT2CQ8NEZ4 4911 aaKnown RBP5.51□□□□□ -1.53
NDE1-201ENST00000396354 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
NDE1-201ENST00000396354 Q5W150 140 aa5.5□□□□□ -1.53
NDE1-201ENST00000396354 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
NDE1-201ENST00000396354 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
NDE1-201ENST00000396354 ZNF861PO60384 105 aa5.5□□□□□ -1.53
NDE1-201ENST00000396354 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
NDE1-201ENST00000396354 C1orf134Q5TEV5 83 aa5.48□□□□□ -1.53
NDE1-201ENST00000396354 PLAC8Q9NZF1 115 aa5.47□□□□□ -1.53
NDE1-201ENST00000396354 ZNF706Q9Y5V0 76 aaPredicted RBP5.46□□□□□ -1.53
NDE1-201ENST00000396354 HRES1P13985 223 aa5.46□□□□□ -1.54
NDE1-201ENST00000396354 IGLV7-46A0A075B6I9 117 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 IGKV2-30P06310 120 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 LCA10Q71F78 164 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 FAT1Q14517 4588 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 SPINK7P58062 85 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 LIMD2Q9BT23 127 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 RYR2Q92736 4967 aa5.45□□□□□ -1.54
NDE1-201ENST00000396354 SPINK1P00995 79 aa5.44□□□□□ -1.54
NDE1-201ENST00000396354 C8orf87E5RJ46 101 aa5.44□□□□□ -1.54
NDE1-201ENST00000396354 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
NDE1-201ENST00000396354 LINC00483Q53H64 154 aa5.43□□□□□ -1.54
NDE1-201ENST00000396354 TP53AIP1Q9HCN2 124 aa5.43□□□□□ -1.54
NDE1-201ENST00000396354 H3BPC8 53 aa5.43□□□□□ -1.54
NDE1-201ENST00000396354 APOBP04114 4563 aaKnown RBP5.42□□□□□ -1.54
NDE1-201ENST00000396354 A6NN06 94 aa5.4□□□□□ -1.54
NDE1-201ENST00000396354 KRTAP10-1P60331 282 aa5.4□□□□□ -1.54
NDE1-201ENST00000396354 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
NDE1-201ENST00000396354 RYR3Q15413 4870 aa5.39□□□□□ -1.55
NDE1-201ENST00000396354 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
NDE1-201ENST00000396354 LINC00313P59037 77 aa5.38□□□□□ -1.55
NDE1-201ENST00000396354 ATP11AUNQ6ZP68 121 aa5.38□□□□□ -1.55
NDE1-201ENST00000396354 SMR3BP02814 79 aaPredicted RBP5.37□□□□□ -1.55
NDE1-201ENST00000396354 C7orf65Q6ZTY9 151 aa5.36□□□□□ -1.55
NDE1-201ENST00000396354 Q75L30 129 aa5.36□□□□□ -1.55
NDE1-201ENST00000396354 FLG2Q5D862 2391 aaPredicted RBP5.35□□□□□ -1.55
NDE1-201ENST00000396354 Q6ZSA8 131 aa5.35□□□□□ -1.55
NDE1-201ENST00000396354 Q8N1X5 172 aa5.34□□□□□ -1.55
NDE1-201ENST00000396354 KRTAP13-2Q52LG2 175 aa5.34□□□□□ -1.56
NDE1-201ENST00000396354 ASB16-AS1Q495Z4 193 aa5.33□□□□□ -1.56
NDE1-201ENST00000396354 PRAC1Q96KF2 57 aa5.33□□□□□ -1.56
NDE1-201ENST00000396354 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
NDE1-201ENST00000396354 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
NDE1-201ENST00000396354 ACYP2P14621 99 aa5.31□□□□□ -1.56
NDE1-201ENST00000396354 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
NDE1-201ENST00000396354 A0A1B0GU69 56 aa5.31□□□□□ -1.56
NDE1-201ENST00000396354 LINC01558Q9Y6Z2 57 aa5.3□□□□□ -1.56
NDE1-201ENST00000396354 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
NDE1-201ENST00000396354 A0A1B0GVY2 172 aa5.28□□□□□ -1.56
NDE1-201ENST00000396354 TYMSOSQ8TAI1 123 aa5.28□□□□□ -1.56
NDE1-201ENST00000396354 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
NDE1-201ENST00000396354 SSBP3-AS1Q7Z2R9 100 aa5.27□□□□□ -1.57
NDE1-201ENST00000396354 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
NDE1-201ENST00000396354 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
NDE1-201ENST00000396354 HSPG2P98160 4391 aa5.23□□□□□ -1.57
NDE1-201ENST00000396354 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
NDE1-201ENST00000396354 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
NDE1-201ENST00000396354 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.57
NDE1-201ENST00000396354 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.58
NDE1-201ENST00000396354 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
NDE1-201ENST00000396354 TNXBP22105 4242 aa5.2□□□□□ -1.58
NDE1-201ENST00000396354 MIR22HGQ0VDD5 57 aa5.18□□□□□ -1.58
NDE1-201ENST00000396354 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
NDE1-201ENST00000396354 MYCBP2O75592 4640 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms