RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
GREB1-206ENST00000396123 EYSQ5T1H1 3165 aa7.51□□□□□ -1.21
GREB1-206ENST00000396123 H1FX-AS1Q4G0G2 97 aa7.51□□□□□ -1.21
GREB1-206ENST00000396123 SPEGQ15772 3267 aa7.48□□□□□ -1.21
GREB1-206ENST00000396123 TNRC18O15417 2968 aaPredicted RBP7.46□□□□□ -1.22
GREB1-206ENST00000396123 SPTBN5Q9NRC6 3674 aaKnown RBP7.46□□□□□ -1.22
GREB1-206ENST00000396123 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
GREB1-206ENST00000396123 DMXL1Q9Y485 3027 aa7.45□□□□□ -1.22
GREB1-206ENST00000396123 DCHS2Q6V1P9 2916 aa7.44□□□□□ -1.22
GREB1-206ENST00000396123 KRTAP13-2Q52LG2 175 aa7.44□□□□□ -1.22
GREB1-206ENST00000396123 HRNRQ86YZ3 2850 aaPredicted RBP7.44□□□□□ -1.22
GREB1-206ENST00000396123 ROMO1P60602 79 aa7.43□□□□□ -1.22
GREB1-206ENST00000396123 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
GREB1-206ENST00000396123 M0QZ58 72 aa7.42□□□□□ -1.22
GREB1-206ENST00000396123 TENM4Q6N022 2769 aa7.4□□□□□ -1.22
GREB1-206ENST00000396123 USP34Q70CQ2 3546 aa7.4□□□□□ -1.22
GREB1-206ENST00000396123 LOC400499M0QZD8 3231 aa7.37□□□□□ -1.23
GREB1-206ENST00000396123 CRYBG3Q68DQ2 2970 aa7.36□□□□□ -1.23
GREB1-206ENST00000396123 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
GREB1-206ENST00000396123 NF1P21359 2839 aa7.34□□□□□ -1.23
GREB1-206ENST00000396123 FBN2P35556 2912 aa7.34□□□□□ -1.23
GREB1-206ENST00000396123 A6NN06 94 aa7.3□□□□□ -1.24
GREB1-206ENST00000396123 KRTAP21-3Q3LHN1 58 aa7.3□□□□□ -1.24
GREB1-206ENST00000396123 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
GREB1-206ENST00000396123 H3BS24 57 aa7.28□□□□□ -1.24
GREB1-206ENST00000396123 A8MU10 97 aa7.23□□□□□ -1.25
GREB1-206ENST00000396123 A8MUU9 505 aa7.18□□□□□ -1.26
GREB1-206ENST00000396123 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
GREB1-206ENST00000396123 MXRA5Q9NR99 2828 aa7.17□□□□□ -1.26
GREB1-206ENST00000396123 C20orf166-AS1Q96NR2 134 aa7.16□□□□□ -1.26
GREB1-206ENST00000396123 KRTAP25-1Q3LHN0 102 aa7.15□□□□□ -1.26
GREB1-206ENST00000396123 MYO15AQ9UKN7 3530 aa7.15□□□□□ -1.27
GREB1-206ENST00000396123 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
GREB1-206ENST00000396123 TENM3Q9P273 2699 aa7.07□□□□□ -1.28
GREB1-206ENST00000396123 CELSR1Q9NYQ6 3014 aa7.06□□□□□ -1.28
GREB1-206ENST00000396123 TENM1Q9UKZ4 2725 aa7.03□□□□□ -1.28
GREB1-206ENST00000396123 RELNP78509 3460 aa7.01□□□□□ -1.29
GREB1-206ENST00000396123 KRTAP16-1A8MUX0 517 aa6.96□□□□□ -1.3
GREB1-206ENST00000396123 DCHS1Q96JQ0 3298 aa6.95□□□□□ -1.3
GREB1-206ENST00000396123 XP32Q5T750 250 aa6.95□□□□□ -1.3
GREB1-206ENST00000396123 WDFY3Q8IZQ1 3526 aa6.94□□□□□ -1.3
GREB1-206ENST00000396123 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
GREB1-206ENST00000396123 TNP1P09430 55 aa6.88□□□□□ -1.31
GREB1-206ENST00000396123 TGP01266 2768 aa6.87□□□□□ -1.31
GREB1-206ENST00000396123 H0YAA0 97 aa6.86□□□□□ -1.31
GREB1-206ENST00000396123 PDZD2O15018 2839 aa6.85□□□□□ -1.31
GREB1-206ENST00000396123 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
GREB1-206ENST00000396123 MUC3AQ02505 3323 aa6.83□□□□□ -1.32
GREB1-206ENST00000396123 LAMA5O15230 3695 aa6.83□□□□□ -1.32
GREB1-206ENST00000396123 NDUFAF8A1L188 74 aa6.82□□□□□ -1.32
GREB1-206ENST00000396123 ZFHX4Q86UP3 3567 aa6.81□□□□□ -1.32
GREB1-206ENST00000396123 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
GREB1-206ENST00000396123 KRTAP13-3Q3SY46 172 aa6.79□□□□□ -1.32
GREB1-206ENST00000396123 ASPMQ8IZT6 3477 aa6.77□□□□□ -1.33
GREB1-206ENST00000396123 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
GREB1-206ENST00000396123 DMDP11532 3685 aa6.74□□□□□ -1.33
GREB1-206ENST00000396123 FBN1P35555 2871 aaKnown RBP6.73□□□□□ -1.33
GREB1-206ENST00000396123 VWFP04275 2813 aa6.73□□□□□ -1.33
GREB1-206ENST00000396123 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
GREB1-206ENST00000396123 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
GREB1-206ENST00000396123 A0A1B0GVY2 172 aa6.7□□□□□ -1.34
GREB1-206ENST00000396123 P0C880 135 aa6.68□□□□□ -1.34
GREB1-206ENST00000396123 CSMD1Q96PZ7 3565 aa6.68□□□□□ -1.34
GREB1-206ENST00000396123 OTOGQ6ZRI0 2925 aa6.66□□□□□ -1.34
GREB1-206ENST00000396123 SMG1Q96Q15 3661 aaKnown RBP6.62□□□□□ -1.35
GREB1-206ENST00000396123 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
GREB1-206ENST00000396123 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
GREB1-206ENST00000396123 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
GREB1-206ENST00000396123 ZFHX3Q15911 3703 aa6.48□□□□□ -1.37
GREB1-206ENST00000396123 FBN3Q75N90 2809 aa6.48□□□□□ -1.37
GREB1-206ENST00000396123 SVEP1Q4LDE5 3571 aa6.48□□□□□ -1.37
GREB1-206ENST00000396123 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
GREB1-206ENST00000396123 SRRM2Q9UQ35 2752 aaKnown RBP6.44□□□□□ -1.38
GREB1-206ENST00000396123 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
GREB1-206ENST00000396123 ANK3Q12955 4377 aaKnown RBP6.42□□□□□ -1.38
GREB1-206ENST00000396123 CSMD2Q7Z408 3487 aa6.37□□□□□ -1.39
GREB1-206ENST00000396123 CUBNO60494 3623 aa6.36□□□□□ -1.39
GREB1-206ENST00000396123 MEGF8Q7Z7M0 2845 aa6.36□□□□□ -1.39
GREB1-206ENST00000396123 KRTAP12-1P59990 96 aa6.34□□□□□ -1.39
GREB1-206ENST00000396123 SPENQ96T58 3664 aaKnown RBP6.34□□□□□ -1.39
GREB1-206ENST00000396123 TRRAPQ9Y4A5 3859 aa6.31□□□□□ -1.4
GREB1-206ENST00000396123 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
GREB1-206ENST00000396123 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.4
GREB1-206ENST00000396123 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
GREB1-206ENST00000396123 BSNQ9UPA5 3926 aa6.19□□□□□ -1.42
GREB1-206ENST00000396123 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
GREB1-206ENST00000396123 KRTAP10-4P60372 401 aaPredicted RBP6.06□□□□□ -1.44
GREB1-206ENST00000396123 KRTAP3-3Q9BYR6 98 aa6.05□□□□□ -1.44
GREB1-206ENST00000396123 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
GREB1-206ENST00000396123 HUWE1Q7Z6Z7 4374 aaKnown RBP6.03□□□□□ -1.44
GREB1-206ENST00000396123 VPS13CQ709C8 3753 aa6□□□□□ -1.45
GREB1-206ENST00000396123 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
GREB1-206ENST00000396123 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
GREB1-206ENST00000396123 CSMD3Q7Z407 3707 aa5.76□□□□□ -1.49
GREB1-206ENST00000396123 ZNF469Q96JG9 3925 aaPredicted RBP5.76□□□□□ -1.49
GREB1-206ENST00000396123 DNAH9Q9NYC9 4486 aa5.75□□□□□ -1.49
GREB1-206ENST00000396123 ALMS1Q8TCU4 4167 aa5.72□□□□□ -1.49
GREB1-206ENST00000396123 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
GREB1-206ENST00000396123 DNAH5Q8TE73 4624 aa5.7□□□□□ -1.5
GREB1-206ENST00000396123 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms