RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 LINC00304Q8N9R0 145 aa8.85□□□□□ -0.99
SFMBT1-201ENST00000394752 Q6ZR54 194 aa8.83□□□□□ -1
SFMBT1-201ENST00000394752 Q1T7F1 81 aa8.82□□□□□ -1
SFMBT1-201ENST00000394752 Q8N9P0 234 aaPredicted RBP8.82□□□□□ -1
SFMBT1-201ENST00000394752 IGLV7-46A0A075B6I9 117 aa8.82□□□□□ -1
SFMBT1-201ENST00000394752 Q8N1X5 172 aa8.81□□□□□ -1
SFMBT1-201ENST00000394752 CD164Q04900 197 aa8.81□□□□□ -1
SFMBT1-201ENST00000394752 KRTAP10-2P60368 255 aa8.77□□□□□ -1.01
SFMBT1-201ENST00000394752 HRES1P13985 223 aa8.76□□□□□ -1.01
SFMBT1-201ENST00000394752 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
SFMBT1-201ENST00000394752 UQCR11O14957 56 aa8.73□□□□□ -1.01
SFMBT1-201ENST00000394752 A0A087X002 238 aa8.73□□□□□ -1.01
SFMBT1-201ENST00000394752 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
SFMBT1-201ENST00000394752 ZCCHC13Q8WW36 166 aaKnown RBP8.71□□□□□ -1.02
SFMBT1-201ENST00000394752 LINC00483Q53H64 154 aa8.7□□□□□ -1.02
SFMBT1-201ENST00000394752 KRTAP10-1P60331 282 aa8.68□□□□□ -1.02
SFMBT1-201ENST00000394752 MIR22HGQ0VDD5 57 aa8.68□□□□□ -1.02
SFMBT1-201ENST00000394752 Q5VV11 94 aa8.68□□□□□ -1.02
SFMBT1-201ENST00000394752 KRTAP13-1Q8IUC0 172 aa8.67□□□□□ -1.02
SFMBT1-201ENST00000394752 Q5W150 140 aa8.65□□□□□ -1.03
SFMBT1-201ENST00000394752 CDC42SE1Q9NRR8 79 aa8.65□□□□□ -1.03
SFMBT1-201ENST00000394752 SRRM2Q9UQ35 2752 aaKnown RBP8.59□□□□□ -1.03
SFMBT1-201ENST00000394752 SPINK7P58062 85 aa8.59□□□□□ -1.03
SFMBT1-201ENST00000394752 Q75L30 129 aa8.59□□□□□ -1.03
SFMBT1-201ENST00000394752 KTN1-AS1Q86SY8 53 aa8.59□□□□□ -1.03
SFMBT1-201ENST00000394752 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
SFMBT1-201ENST00000394752 LCE6AA0A183 80 aa8.55□□□□□ -1.04
SFMBT1-201ENST00000394752 HUWE1Q7Z6Z7 4374 aaKnown RBP8.5□□□□□ -1.05
SFMBT1-201ENST00000394752 FBN3Q75N90 2809 aa8.49□□□□□ -1.05
SFMBT1-201ENST00000394752 A8MU10 97 aa8.49□□□□□ -1.05
SFMBT1-201ENST00000394752 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
SFMBT1-201ENST00000394752 A0A0D9SG42 100 aa8.45□□□□□ -1.06
SFMBT1-201ENST00000394752 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
SFMBT1-201ENST00000394752 LCA10Q71F78 164 aa8.43□□□□□ -1.06
SFMBT1-201ENST00000394752 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
SFMBT1-201ENST00000394752 DMAC1Q96GE9 116 aa8.41□□□□□ -1.06
SFMBT1-201ENST00000394752 RBM12B-AS1Q9P1G2 102 aa8.37□□□□□ -1.07
SFMBT1-201ENST00000394752 A0A1B0GU33 70 aa8.37□□□□□ -1.07
SFMBT1-201ENST00000394752 Q6ZSA8 131 aa8.36□□□□□ -1.07
SFMBT1-201ENST00000394752 ASB16-AS1Q495Z4 193 aa8.34□□□□□ -1.07
SFMBT1-201ENST00000394752 COL7A1Q02388 2944 aa8.3□□□□□ -1.08
SFMBT1-201ENST00000394752 LINC01554Q52M75 96 aa8.3□□□□□ -1.08
SFMBT1-201ENST00000394752 J3QL48 77 aa8.29□□□□□ -1.08
SFMBT1-201ENST00000394752 DNAH9Q9NYC9 4486 aa8.28□□□□□ -1.08
SFMBT1-201ENST00000394752 SPINT4Q6UDR6 99 aa8.27□□□□□ -1.09
SFMBT1-201ENST00000394752 MEGF8Q7Z7M0 2845 aa8.26□□□□□ -1.09
SFMBT1-201ENST00000394752 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
SFMBT1-201ENST00000394752 CSMD3Q7Z407 3707 aa8.23□□□□□ -1.09
SFMBT1-201ENST00000394752 ANK2Q01484 3957 aa8.22□□□□□ -1.09
SFMBT1-201ENST00000394752 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
SFMBT1-201ENST00000394752 Q5VSD8 79 aa8.22□□□□□ -1.09
SFMBT1-201ENST00000394752 COX6B2Q6YFQ2 88 aa8.2□□□□□ -1.1
SFMBT1-201ENST00000394752 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
SFMBT1-201ENST00000394752 CMYA5Q8N3K9 4069 aa8.18□□□□□ -1.1
SFMBT1-201ENST00000394752 DNAH3Q8TD57 4116 aa8.17□□□□□ -1.1
SFMBT1-201ENST00000394752 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
SFMBT1-201ENST00000394752 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
SFMBT1-201ENST00000394752 PLECQ15149 4684 aaKnown RBP8.13□□□□□ -1.11
SFMBT1-201ENST00000394752 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
SFMBT1-201ENST00000394752 A6NN06 94 aa8.1□□□□□ -1.11
SFMBT1-201ENST00000394752 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
SFMBT1-201ENST00000394752 S4R3F8 94 aa8.09□□□□□ -1.11
SFMBT1-201ENST00000394752 H1FX-AS1Q4G0G2 97 aa8.05□□□□□ -1.12
SFMBT1-201ENST00000394752 STARD9Q9P2P6 4700 aa7.99□□□□□ -1.13
SFMBT1-201ENST00000394752 DNAH1Q9P2D7 4330 aa7.98□□□□□ -1.13
SFMBT1-201ENST00000394752 KRTAP16-1A8MUX0 517 aa7.97□□□□□ -1.13
SFMBT1-201ENST00000394752 RPL37P61927 97 aaKnown RBP7.97□□□□□ -1.13
SFMBT1-201ENST00000394752 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
SFMBT1-201ENST00000394752 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.14
SFMBT1-201ENST00000394752 PRKDCP78527 4128 aaKnown RBP7.94□□□□□ -1.14
SFMBT1-201ENST00000394752 A8MUU9 505 aa7.91□□□□□ -1.14
SFMBT1-201ENST00000394752 KRTAP13-3Q3SY46 172 aa7.91□□□□□ -1.14
SFMBT1-201ENST00000394752 LYSTQ99698 3801 aa7.89□□□□□ -1.15
SFMBT1-201ENST00000394752 C20orf166-AS1Q96NR2 134 aa7.89□□□□□ -1.15
SFMBT1-201ENST00000394752 R4GN34 69 aa7.89□□□□□ -1.15
SFMBT1-201ENST00000394752 DNHD1Q96M86 4753 aa7.88□□□□□ -1.15
SFMBT1-201ENST00000394752 CAMK2N1Q7Z7J9 78 aa7.85□□□□□ -1.15
SFMBT1-201ENST00000394752 ROMO1P60602 79 aa7.84□□□□□ -1.15
SFMBT1-201ENST00000394752 DYNC2H1Q8NCM8 4307 aaKnown RBP7.82□□□□□ -1.16
SFMBT1-201ENST00000394752 DNAH17Q9UFH2 4485 aa7.82□□□□□ -1.16
SFMBT1-201ENST00000394752 M0QZ58 72 aa7.82□□□□□ -1.16
SFMBT1-201ENST00000394752 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
SFMBT1-201ENST00000394752 SEC61BP60468 96 aaKnown RBP7.79□□□□□ -1.16
SFMBT1-201ENST00000394752 KMT2AQ03164 3969 aa7.77□□□□□ -1.16
SFMBT1-201ENST00000394752 DNAH7Q8WXX0 4024 aa7.77□□□□□ -1.17
SFMBT1-201ENST00000394752 DNAH11Q96DT5 4516 aa7.76□□□□□ -1.17
SFMBT1-201ENST00000394752 H0YAA0 97 aa7.73□□□□□ -1.17
SFMBT1-201ENST00000394752 M0R2T5 61 aa7.71□□□□□ -1.18
SFMBT1-201ENST00000394752 H3BS24 57 aa7.71□□□□□ -1.18
SFMBT1-201ENST00000394752 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
SFMBT1-201ENST00000394752 XP32Q5T750 250 aa7.7□□□□□ -1.18
SFMBT1-201ENST00000394752 DNAH2Q9P225 4427 aa7.68□□□□□ -1.18
SFMBT1-201ENST00000394752 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
SFMBT1-201ENST00000394752 DNAH8Q96JB1 4490 aa7.64□□□□□ -1.19
SFMBT1-201ENST00000394752 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
SFMBT1-201ENST00000394752 KRTAP10-4P60372 401 aaPredicted RBP7.62□□□□□ -1.19
SFMBT1-201ENST00000394752 HECTD4Q9Y4D8 3996 aa7.61□□□□□ -1.19
SFMBT1-201ENST00000394752 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
SFMBT1-201ENST00000394752 P0C880 135 aa7.55□□□□□ -1.2
SFMBT1-201ENST00000394752 LUZP6Q538Z0 58 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms