RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
MTHFD2-201ENST00000394053 A0A087X002 238 aa6.32□□□□□ -1.4
MTHFD2-201ENST00000394053 PRO0628Q9UI54 55 aa6.29□□□□□ -1.4
MTHFD2-201ENST00000394053 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
MTHFD2-201ENST00000394053 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
MTHFD2-201ENST00000394053 HRES1P13985 223 aa6.26□□□□□ -1.41
MTHFD2-201ENST00000394053 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
MTHFD2-201ENST00000394053 BSNQ9UPA5 3926 aa6.24□□□□□ -1.41
MTHFD2-201ENST00000394053 Q6ZSA8 131 aa6.24□□□□□ -1.41
MTHFD2-201ENST00000394053 ZCCHC13Q8WW36 166 aaKnown RBP6.24□□□□□ -1.41
MTHFD2-201ENST00000394053 UQCR11O14957 56 aa6.24□□□□□ -1.41
MTHFD2-201ENST00000394053 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
MTHFD2-201ENST00000394053 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
MTHFD2-201ENST00000394053 Q5W150 140 aa6.21□□□□□ -1.42
MTHFD2-201ENST00000394053 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
MTHFD2-201ENST00000394053 SPINK7P58062 85 aa6.18□□□□□ -1.42
MTHFD2-201ENST00000394053 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
MTHFD2-201ENST00000394053 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
MTHFD2-201ENST00000394053 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
MTHFD2-201ENST00000394053 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
MTHFD2-201ENST00000394053 TRRAPQ9Y4A5 3859 aa6.12□□□□□ -1.43
MTHFD2-201ENST00000394053 ASB16-AS1Q495Z4 193 aa6.09□□□□□ -1.43
MTHFD2-201ENST00000394053 Q1T7F1 81 aa6.09□□□□□ -1.43
MTHFD2-201ENST00000394053 LINC01554Q52M75 96 aa6.08□□□□□ -1.44
MTHFD2-201ENST00000394053 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
MTHFD2-201ENST00000394053 A0A0D9SG42 100 aa6.07□□□□□ -1.44
MTHFD2-201ENST00000394053 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
MTHFD2-201ENST00000394053 RPS29P62273 56 aaKnown RBP6.03□□□□□ -1.44
MTHFD2-201ENST00000394053 Q5XG85 94 aa6.03□□□□□ -1.44
MTHFD2-201ENST00000394053 A0A1B0GU33 70 aa6.01□□□□□ -1.45
MTHFD2-201ENST00000394053 LINC01558Q9Y6Z2 57 aa6.01□□□□□ -1.45
MTHFD2-201ENST00000394053 CSAG1Q6PB30 78 aa6.01□□□□□ -1.45
MTHFD2-201ENST00000394053 ANK3Q12955 4377 aaKnown RBP6.01□□□□□ -1.45
MTHFD2-201ENST00000394053 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
MTHFD2-201ENST00000394053 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
MTHFD2-201ENST00000394053 OXTP01178 125 aa6□□□□□ -1.45
MTHFD2-201ENST00000394053 DMAC1Q96GE9 116 aa6□□□□□ -1.45
MTHFD2-201ENST00000394053 FBN3Q75N90 2809 aa5.99□□□□□ -1.45
MTHFD2-201ENST00000394053 S4R3F8 94 aa5.99□□□□□ -1.45
MTHFD2-201ENST00000394053 M0R2T5 61 aa5.98□□□□□ -1.45
MTHFD2-201ENST00000394053 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
MTHFD2-201ENST00000394053 Q75L30 129 aa5.97□□□□□ -1.45
MTHFD2-201ENST00000394053 Q5VV11 94 aa5.93□□□□□ -1.46
MTHFD2-201ENST00000394053 COL7A1Q02388 2944 aa5.92□□□□□ -1.46
MTHFD2-201ENST00000394053 VPS13CQ709C8 3753 aa5.91□□□□□ -1.46
MTHFD2-201ENST00000394053 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.46
MTHFD2-201ENST00000394053 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
MTHFD2-201ENST00000394053 ZNF469Q96JG9 3925 aaPredicted RBP5.87□□□□□ -1.47
MTHFD2-201ENST00000394053 R4GN34 69 aa5.85□□□□□ -1.47
MTHFD2-201ENST00000394053 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
MTHFD2-201ENST00000394053 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
MTHFD2-201ENST00000394053 RPL37P61927 97 aaKnown RBP5.84□□□□□ -1.47
MTHFD2-201ENST00000394053 A8MUU9 505 aa5.82□□□□□ -1.48
MTHFD2-201ENST00000394053 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
MTHFD2-201ENST00000394053 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
MTHFD2-201ENST00000394053 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
MTHFD2-201ENST00000394053 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
MTHFD2-201ENST00000394053 SPATA8Q6RVD6 105 aa5.75□□□□□ -1.49
MTHFD2-201ENST00000394053 M0QZ58 72 aa5.75□□□□□ -1.49
MTHFD2-201ENST00000394053 LCA10Q71F78 164 aa5.75□□□□□ -1.49
MTHFD2-201ENST00000394053 XP32Q5T750 250 aa5.73□□□□□ -1.49
MTHFD2-201ENST00000394053 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
MTHFD2-201ENST00000394053 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
MTHFD2-201ENST00000394053 KRTAP10-8P60410 259 aa5.66□□□□□ -1.5
MTHFD2-201ENST00000394053 TPRXLQ17RH7 258 aa5.63□□□□□ -1.51
MTHFD2-201ENST00000394053 A8MU10 97 aa5.62□□□□□ -1.51
MTHFD2-201ENST00000394053 KRTAP13-3Q3SY46 172 aa5.62□□□□□ -1.51
MTHFD2-201ENST00000394053 AKAP9Q99996 3911 aa5.6□□□□□ -1.51
MTHFD2-201ENST00000394053 ROMO1P60602 79 aa5.57□□□□□ -1.52
MTHFD2-201ENST00000394053 HUWE1Q7Z6Z7 4374 aaKnown RBP5.52□□□□□ -1.53
MTHFD2-201ENST00000394053 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
MTHFD2-201ENST00000394053 CSMD3Q7Z407 3707 aa5.51□□□□□ -1.53
MTHFD2-201ENST00000394053 A6NN06 94 aa5.45□□□□□ -1.54
MTHFD2-201ENST00000394053 LUZP6Q538Z0 58 aa5.43□□□□□ -1.54
MTHFD2-201ENST00000394053 DNHD1Q96M86 4753 aa5.43□□□□□ -1.54
MTHFD2-201ENST00000394053 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
MTHFD2-201ENST00000394053 P0C880 135 aa5.37□□□□□ -1.55
MTHFD2-201ENST00000394053 H0YAA0 97 aa5.36□□□□□ -1.55
MTHFD2-201ENST00000394053 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
MTHFD2-201ENST00000394053 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
MTHFD2-201ENST00000394053 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
MTHFD2-201ENST00000394053 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
MTHFD2-201ENST00000394053 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
MTHFD2-201ENST00000394053 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
MTHFD2-201ENST00000394053 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
MTHFD2-201ENST00000394053 TNP1P09430 55 aa5.25□□□□□ -1.57
MTHFD2-201ENST00000394053 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
MTHFD2-201ENST00000394053 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
MTHFD2-201ENST00000394053 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
MTHFD2-201ENST00000394053 PRKDCP78527 4128 aaKnown RBP5.16□□□□□ -1.58
MTHFD2-201ENST00000394053 DNAH1Q9P2D7 4330 aa5.16□□□□□ -1.58
MTHFD2-201ENST00000394053 STARD9Q9P2P6 4700 aa5.13□□□□□ -1.59
MTHFD2-201ENST00000394053 DNAH10Q8IVF4 4471 aa5.11□□□□□ -1.59
MTHFD2-201ENST00000394053 VPS13DQ5THJ4 4388 aa5.08□□□□□ -1.6
MTHFD2-201ENST00000394053 KRTAP12-2P59991 146 aa5.07□□□□□ -1.6
MTHFD2-201ENST00000394053 ALMS1Q8TCU4 4167 aa5.07□□□□□ -1.6
MTHFD2-201ENST00000394053 KRTAP10-6P60371 365 aaPredicted RBP5.06□□□□□ -1.6
MTHFD2-201ENST00000394053 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
MTHFD2-201ENST00000394053 FAT1Q14517 4588 aa5.05□□□□□ -1.6
MTHFD2-201ENST00000394053 ANK2Q01484 3957 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms