RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 FAM25AB3EWG3 89 aa-0.9□□□□□ -2.55
RNU6-39P-201ENST00000384344 FAM25CB3EWG5 89 aa-0.9□□□□□ -2.55
RNU6-39P-201ENST00000384344 FAM25GB3EWG6 89 aa-0.9□□□□□ -2.55
RNU6-39P-201ENST00000384344 HTN1P15515 57 aa-0.9□□□□□ -2.55
RNU6-39P-201ENST00000384344 PRLHP81277 87 aa-0.9□□□□□ -2.55
RNU6-39P-201ENST00000384344 LSM10Q969L4 123 aaKnown RBP-0.9□□□□□ -2.55
RNU6-39P-201ENST00000384344 HMGN4O00479 90 aa-0.91□□□□□ -2.56
RNU6-39P-201ENST00000384344 SFT2D2O95562 160 aa-0.91□□□□□ -2.56
RNU6-39P-201ENST00000384344 MGPP08493 103 aa-0.91□□□□□ -2.56
RNU6-39P-201ENST00000384344 SELENOWP63302 87 aa-0.91□□□□□ -2.56
RNU6-39P-201ENST00000384344 MYOZ3Q8TDC0 251 aa-0.91□□□□□ -2.56
RNU6-39P-201ENST00000384344 LINC01546A6NGU7 62 aa-0.92□□□□□ -2.56
RNU6-39P-201ENST00000384344 NDUFA4O00483 81 aa-0.92□□□□□ -2.56
RNU6-39P-201ENST00000384344 DEFB110Q30KQ9 67 aa-0.92□□□□□ -2.56
RNU6-39P-201ENST00000384344 WFDC13Q8IUB5 93 aa-0.92□□□□□ -2.56
RNU6-39P-201ENST00000384344 ARL11Q969Q4 196 aa-0.92□□□□□ -2.56
RNU6-39P-201ENST00000384344 TRBV7-4A0A0J9YYF1 115 aa-0.93□□□□□ -2.56
RNU6-39P-201ENST00000384344 Q56UQ5 140 aa-0.93□□□□□ -2.56
RNU6-39P-201ENST00000384344 MEIG1Q5JSS6 88 aa-0.93□□□□□ -2.56
RNU6-39P-201ENST00000384344 MRPL54Q6P161 138 aaKnown RBP-0.93□□□□□ -2.56
RNU6-39P-201ENST00000384344 TMEM263Q8WUH6 116 aaKnown RBP-0.93□□□□□ -2.56
RNU6-39P-201ENST00000384344 M0QZ58 72 aa-0.94□□□□□ -2.56
RNU6-39P-201ENST00000384344 WHAMMP3Q1A5X7 153 aa-0.94□□□□□ -2.56
RNU6-39P-201ENST00000384344 C6orf201Q7Z4U5 140 aa-0.94□□□□□ -2.56
RNU6-39P-201ENST00000384344 C8orf59Q8N0T1 100 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-39P-201ENST00000384344 SPANXDQ9BXN6 97 aa-0.94□□□□□ -2.56
RNU6-39P-201ENST00000384344 SYS1-DBNDD2H3BUS1 97 aa-0.95□□□□□ -2.56
RNU6-39P-201ENST00000384344 SFTA3P0C7M3 94 aa-0.95□□□□□ -2.56
RNU6-39P-201ENST00000384344 DEFB105AQ8NG35 78 aa-0.95□□□□□ -2.56
RNU6-39P-201ENST00000384344 MIF4GDA9UHW6 222 aaKnown RBP-0.96□□□□□ -2.56
RNU6-39P-201ENST00000384344 IFNGP01579 166 aa-0.96□□□□□ -2.56
RNU6-39P-201ENST00000384344 APOC2P02655 101 aa-0.96□□□□□ -2.56
RNU6-39P-201ENST00000384344 COX8AP10176 69 aa-0.96□□□□□ -2.56
RNU6-39P-201ENST00000384344 LINC00470Q9BZP3 86 aa-0.96□□□□□ -2.56
RNU6-39P-201ENST00000384344 UQCR10Q9UDW1 63 aa-0.96□□□□□ -2.56
RNU6-39P-201ENST00000384344 LOC105371267A0A1B0GV96 52 aa-0.97□□□□□ -2.56
RNU6-39P-201ENST00000384344 COMMD6Q7Z4G1 85 aa-0.97□□□□□ -2.56
RNU6-39P-201ENST00000384344 NXT2Q9NPJ8 142 aaKnown RBP-0.97□□□□□ -2.56
RNU6-39P-201ENST00000384344 HILPDAQ9Y5L2 63 aa-0.97□□□□□ -2.56
RNU6-39P-201ENST00000384344 CHKB-CPT1BH3BT56 60 aa-0.98□□□□□ -2.57
RNU6-39P-201ENST00000384344 BTG2P78543 158 aa-0.98□□□□□ -2.57
RNU6-39P-201ENST00000384344 C5orf38Q86SI9 138 aa-0.98□□□□□ -2.57
RNU6-39P-201ENST00000384344 USMG5Q96IX5 58 aa-0.98□□□□□ -2.57
RNU6-39P-201ENST00000384344 MT-ATP8P03928 68 aa-0.99□□□□□ -2.57
RNU6-39P-201ENST00000384344 CATR1Q13166 79 aa-0.99□□□□□ -2.57
RNU6-39P-201ENST00000384344 CCDC58Q4VC31 144 aa-0.99□□□□□ -2.57
RNU6-39P-201ENST00000384344 C10orf113Q5VZT2 155 aa-0.99□□□□□ -2.57
RNU6-39P-201ENST00000384344 M0R1W7 72 aa-1□□□□□ -2.57
RNU6-39P-201ENST00000384344 GNG7O60262 68 aa-1□□□□□ -2.57
RNU6-39P-201ENST00000384344 IGLC1P0CG04 106 aa-1□□□□□ -2.57
RNU6-39P-201ENST00000384344 DEFB131AP59861 70 aa-1□□□□□ -2.57
RNU6-39P-201ENST00000384344 Q0VG73 95 aa-1□□□□□ -2.57
RNU6-39P-201ENST00000384344 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1□□□□□ -2.57
RNU6-39P-201ENST00000384344 FGF7P21781 194 aa-1.01□□□□□ -2.57
RNU6-39P-201ENST00000384344 SPRR4Q96PI1 79 aa-1.01□□□□□ -2.57
RNU6-39P-201ENST00000384344 NOP10Q9NPE3 64 aaKnown RBP-1.01□□□□□ -2.57
RNU6-39P-201ENST00000384344 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.01□□□□□ -2.57
RNU6-39P-201ENST00000384344 TNP1P09430 55 aa-1.02□□□□□ -2.57
RNU6-39P-201ENST00000384344 KTN1Q86UP2 1357 aaKnown RBP-1.02□□□□□ -2.57
RNU6-39P-201ENST00000384344 PRO1933Q9H354 126 aa-1.02□□□□□ -2.57
RNU6-39P-201ENST00000384344 ARL2-SNX15V9GYD0 113 aa-1.02□□□□□ -2.57
RNU6-39P-201ENST00000384344 MINOS1Q5TGZ0 78 aa-1.03□□□□□ -2.57
RNU6-39P-201ENST00000384344 ENHOQ6UWT2 76 aa-1.03□□□□□ -2.57
RNU6-39P-201ENST00000384344 NDUFA2O43678 99 aa-1.04□□□□□ -2.58
RNU6-39P-201ENST00000384344 RHPN1-AS1Q9BWJ2 59 aa-1.04□□□□□ -2.58
RNU6-39P-201ENST00000384344 CDC42SE2Q9NRR3 84 aa-1.04□□□□□ -2.58
RNU6-39P-201ENST00000384344 FAM223AQ8IWN6 122 aa-1.05□□□□□ -2.58
RNU6-39P-201ENST00000384344 FAM167A-AS1Q96KT0 104 aa-1.05□□□□□ -2.58
RNU6-39P-201ENST00000384344 UBE2L5PA0A1B0GUS4 154 aa-1.06□□□□□ -2.58
RNU6-39P-201ENST00000384344 GYPAP02724 150 aa-1.06□□□□□ -2.58
RNU6-39P-201ENST00000384344 UBE2L3P68036 154 aaKnown RBP-1.06□□□□□ -2.58
RNU6-39P-201ENST00000384344 TSC22D3Q99576 134 aa-1.06□□□□□ -2.58
RNU6-39P-201ENST00000384344 C9orf153Q5TBE3 101 aa-1.07□□□□□ -2.58
RNU6-39P-201ENST00000384344 KAAG1Q9UBP8 84 aa-1.07□□□□□ -2.58
RNU6-39P-201ENST00000384344 A0A1B0GWA3 101 aa-1.08□□□□□ -2.58
RNU6-39P-201ENST00000384344 CPSF4LA6NMK7 179 aaKnown RBP-1.08□□□□□ -2.58
RNU6-39P-201ENST00000384344 F6UZH7 168 aa-1.08□□□□□ -2.58
RNU6-39P-201ENST00000384344 AKAIN1P0CW23 69 aa-1.08□□□□□ -2.58
RNU6-39P-201ENST00000384344 ATP5EP56381 51 aaPredicted RBP-1.08□□□□□ -2.58
RNU6-39P-201ENST00000384344 LCN9Q8WX39 176 aa-1.08□□□□□ -2.58
RNU6-39P-201ENST00000384344 H0YGG7 62 aa-1.09□□□□□ -2.58
RNU6-39P-201ENST00000384344 MRPL33O75394 65 aaKnown RBP-1.09□□□□□ -2.58
RNU6-39P-201ENST00000384344 GNG11P61952 73 aa-1.09□□□□□ -2.58
RNU6-39P-201ENST00000384344 C1orf54Q8WWF1 131 aa-1.09□□□□□ -2.58
RNU6-39P-201ENST00000384344 RABAC1Q9UI14 185 aa-1.09□□□□□ -2.58
RNU6-39P-201ENST00000384344 FAM24AA6NFZ4 105 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 OOSP1A8MZH6 123 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 TMEM262E9PQX1 116 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 H3BUA1 57 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 COX6CP09669 75 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 TRAPPC2P0DI81 140 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 TRAPPC2BP0DI82 140 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 MANBALQ9NQG1 85 aa-1.1□□□□□ -2.59
RNU6-39P-201ENST00000384344 TCHHQ07283 1943 aa-1.11□□□□□ -2.59
RNU6-39P-201ENST00000384344 A0A087WWC5 75 aa-1.11□□□□□ -2.59
RNU6-39P-201ENST00000384344 MMP24-AS1A0A0U1RRL7 71 aa-1.11□□□□□ -2.59
RNU6-39P-201ENST00000384344 SEC11AP67812 179 aa-1.11□□□□□ -2.59
RNU6-39P-201ENST00000384344 PSMG4Q5JS54 123 aa-1.11□□□□□ -2.59
RNU6-39P-201ENST00000384344 RPS27P42677 84 aaKnown RBP-1.12□□□□□ -2.59
RNU6-39P-201ENST00000384344 PP6455Q8WZ26 134 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms