RNA–Protein interactions for RNA: ENST00000381337.6

THUMPD1-201, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 4,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-201ENST00000381337 C9orf92A6NGG3 77 aa6.91□□□□□ -1.3
THUMPD1-201ENST00000381337 WWC2-AS2Q96NR7 200 aa6.91□□□□□ -1.3
THUMPD1-201ENST00000381337 DMAC1Q96GE9 116 aa6.89□□□□□ -1.31
THUMPD1-201ENST00000381337 SPENQ96T58 3664 aaKnown RBP6.88□□□□□ -1.31
THUMPD1-201ENST00000381337 MXRA5Q9NR99 2828 aa6.87□□□□□ -1.31
THUMPD1-201ENST00000381337 A0A0D9SG42 100 aa6.86□□□□□ -1.31
THUMPD1-201ENST00000381337 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
THUMPD1-201ENST00000381337 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
THUMPD1-201ENST00000381337 CSMD2Q7Z408 3487 aa6.85□□□□□ -1.31
THUMPD1-201ENST00000381337 PLAC8Q9NZF1 115 aa6.83□□□□□ -1.32
THUMPD1-201ENST00000381337 TENM4Q6N022 2769 aa6.83□□□□□ -1.32
THUMPD1-201ENST00000381337 A0A087X002 238 aa6.82□□□□□ -1.32
THUMPD1-201ENST00000381337 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
THUMPD1-201ENST00000381337 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
THUMPD1-201ENST00000381337 ZFHX3Q15911 3703 aa6.82□□□□□ -1.32
THUMPD1-201ENST00000381337 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
THUMPD1-201ENST00000381337 PANO1I0J062 215 aa6.79□□□□□ -1.32
THUMPD1-201ENST00000381337 KRTAP11-1Q8IUC1 163 aa6.79□□□□□ -1.32
THUMPD1-201ENST00000381337 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
THUMPD1-201ENST00000381337 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
THUMPD1-201ENST00000381337 KMT2BQ9UMN6 2715 aaPredicted RBP6.77□□□□□ -1.33
THUMPD1-201ENST00000381337 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
THUMPD1-201ENST00000381337 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
THUMPD1-201ENST00000381337 OTOGQ6ZRI0 2925 aa6.72□□□□□ -1.33
THUMPD1-201ENST00000381337 FBN1P35555 2871 aaKnown RBP6.68□□□□□ -1.34
THUMPD1-201ENST00000381337 H1FX-AS1Q4G0G2 97 aa6.65□□□□□ -1.35
THUMPD1-201ENST00000381337 BSNQ9UPA5 3926 aa6.64□□□□□ -1.35
THUMPD1-201ENST00000381337 KRTAP13-1Q8IUC0 172 aa6.64□□□□□ -1.35
THUMPD1-201ENST00000381337 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
THUMPD1-201ENST00000381337 ROMO1P60602 79 aa6.62□□□□□ -1.35
THUMPD1-201ENST00000381337 TENM1Q9UKZ4 2725 aa6.62□□□□□ -1.35
THUMPD1-201ENST00000381337 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
THUMPD1-201ENST00000381337 LUZP6Q538Z0 58 aa6.57□□□□□ -1.36
THUMPD1-201ENST00000381337 PDZD2O15018 2839 aa6.57□□□□□ -1.36
THUMPD1-201ENST00000381337 VWFP04275 2813 aa6.56□□□□□ -1.36
THUMPD1-201ENST00000381337 Q6ZRN7 208 aaPredicted RBP6.54□□□□□ -1.36
THUMPD1-201ENST00000381337 KRTAP10-2P60368 255 aa6.51□□□□□ -1.37
THUMPD1-201ENST00000381337 KRTAP10-1P60331 282 aa6.5□□□□□ -1.37
THUMPD1-201ENST00000381337 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
THUMPD1-201ENST00000381337 VPS13CQ709C8 3753 aa6.5□□□□□ -1.37
THUMPD1-201ENST00000381337 S4R3F8 94 aa6.5□□□□□ -1.37
THUMPD1-201ENST00000381337 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
THUMPD1-201ENST00000381337 TENM3Q9P273 2699 aa6.46□□□□□ -1.38
THUMPD1-201ENST00000381337 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
THUMPD1-201ENST00000381337 Q6ZSA8 131 aa6.41□□□□□ -1.38
THUMPD1-201ENST00000381337 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.39
THUMPD1-201ENST00000381337 A8MUU9 505 aa6.39□□□□□ -1.39
THUMPD1-201ENST00000381337 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
THUMPD1-201ENST00000381337 NDUFAF8A1L188 74 aa6.37□□□□□ -1.39
THUMPD1-201ENST00000381337 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
THUMPD1-201ENST00000381337 TGP01266 2768 aa6.37□□□□□ -1.39
THUMPD1-201ENST00000381337 R4GN34 69 aa6.36□□□□□ -1.39
THUMPD1-201ENST00000381337 TENM2Q9NT68 2774 aa6.32□□□□□ -1.4
THUMPD1-201ENST00000381337 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
THUMPD1-201ENST00000381337 H0YAA0 97 aa6.3□□□□□ -1.4
THUMPD1-201ENST00000381337 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
THUMPD1-201ENST00000381337 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
THUMPD1-201ENST00000381337 M0QZ58 72 aa6.28□□□□□ -1.4
THUMPD1-201ENST00000381337 KRTAP13-3Q3SY46 172 aa6.27□□□□□ -1.41
THUMPD1-201ENST00000381337 J3QL48 77 aa6.24□□□□□ -1.41
THUMPD1-201ENST00000381337 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.41
THUMPD1-201ENST00000381337 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
THUMPD1-201ENST00000381337 KRTAP1-4P0C5Y4 121 aa6.17□□□□□ -1.42
THUMPD1-201ENST00000381337 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
THUMPD1-201ENST00000381337 Q5VSD8 79 aa6.11□□□□□ -1.43
THUMPD1-201ENST00000381337 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
THUMPD1-201ENST00000381337 P0C880 135 aa6.01□□□□□ -1.45
THUMPD1-201ENST00000381337 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
THUMPD1-201ENST00000381337 ANK3Q12955 4377 aaKnown RBP6□□□□□ -1.45
THUMPD1-201ENST00000381337 FBN3Q75N90 2809 aa5.98□□□□□ -1.45
THUMPD1-201ENST00000381337 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
THUMPD1-201ENST00000381337 M0R2T5 61 aa5.92□□□□□ -1.46
THUMPD1-201ENST00000381337 XP32Q5T750 250 aa5.89□□□□□ -1.47
THUMPD1-201ENST00000381337 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
THUMPD1-201ENST00000381337 AKAP9Q99996 3911 aa5.87□□□□□ -1.47
THUMPD1-201ENST00000381337 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
THUMPD1-201ENST00000381337 MEGF8Q7Z7M0 2845 aa5.86□□□□□ -1.47
THUMPD1-201ENST00000381337 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
THUMPD1-201ENST00000381337 KRTAP10-8P60410 259 aa5.84□□□□□ -1.47
THUMPD1-201ENST00000381337 TNP1P09430 55 aa5.84□□□□□ -1.48
THUMPD1-201ENST00000381337 CSMD3Q7Z407 3707 aa5.82□□□□□ -1.48
THUMPD1-201ENST00000381337 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
THUMPD1-201ENST00000381337 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
THUMPD1-201ENST00000381337 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
THUMPD1-201ENST00000381337 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
THUMPD1-201ENST00000381337 DNHD1Q96M86 4753 aa5.64□□□□□ -1.51
THUMPD1-201ENST00000381337 KRTAP15-1Q3LI76 137 aa5.6□□□□□ -1.51
THUMPD1-201ENST00000381337 LCE2DQ5TA82 110 aaPredicted RBP5.59□□□□□ -1.51
THUMPD1-201ENST00000381337 KRTAP3-2Q9BYR7 98 aa5.55□□□□□ -1.52
THUMPD1-201ENST00000381337 KRTAP21-3Q3LHN1 58 aa5.54□□□□□ -1.52
THUMPD1-201ENST00000381337 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
THUMPD1-201ENST00000381337 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
THUMPD1-201ENST00000381337 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
THUMPD1-201ENST00000381337 ANK2Q01484 3957 aa5.38□□□□□ -1.55
THUMPD1-201ENST00000381337 PRKDCP78527 4128 aaKnown RBP5.36□□□□□ -1.55
THUMPD1-201ENST00000381337 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
THUMPD1-201ENST00000381337 PLECQ15149 4684 aaKnown RBP5.3□□□□□ -1.56
THUMPD1-201ENST00000381337 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
THUMPD1-201ENST00000381337 DNAH10Q8IVF4 4471 aa5.26□□□□□ -1.57
THUMPD1-201ENST00000381337 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms