RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 DNAL4O96015 105 aa7.11□□□□□ -1.27
RPAIN-202ENST00000381208 SMIM29Q86T20 159 aa7.08□□□□□ -1.28
RPAIN-202ENST00000381208 SS18L2Q9UHA2 77 aa7.08□□□□□ -1.28
RPAIN-202ENST00000381208 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
RPAIN-202ENST00000381208 PCOTHQ58A44 107 aa7.07□□□□□ -1.28
RPAIN-202ENST00000381208 FAM218AQ96MZ4 157 aa7.06□□□□□ -1.28
RPAIN-202ENST00000381208 IGLV8-61A0A075B6I0 122 aa7.05□□□□□ -1.28
RPAIN-202ENST00000381208 F8WEM9 126 aa7.05□□□□□ -1.28
RPAIN-202ENST00000381208 BAALC-AS2P0C853 105 aa7.05□□□□□ -1.28
RPAIN-202ENST00000381208 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
RPAIN-202ENST00000381208 H3BQ85 93 aa7.04□□□□□ -1.28
RPAIN-202ENST00000381208 C1orf195Q5TG92 126 aa7.04□□□□□ -1.28
RPAIN-202ENST00000381208 ORMDL1Q9P0S3 153 aa7.03□□□□□ -1.28
RPAIN-202ENST00000381208 FAM240AA0A1B0GVK7 77 aa7.01□□□□□ -1.29
RPAIN-202ENST00000381208 Q6JHZ5 121 aa7.01□□□□□ -1.29
RPAIN-202ENST00000381208 LINC00575Q6W349 94 aa7.01□□□□□ -1.29
RPAIN-202ENST00000381208 hADV29S1A0JD25 119 aa7□□□□□ -1.29
RPAIN-202ENST00000381208 TMEM256-PLSCR3K7ERE1 68 aa7□□□□□ -1.29
RPAIN-202ENST00000381208 ACYP1P07311 99 aa7□□□□□ -1.29
RPAIN-202ENST00000381208 RPL37P61927 97 aaKnown RBP6.98□□□□□ -1.29
RPAIN-202ENST00000381208 JMJD7-PLA2G4BH0Y9G9 81 aa6.97□□□□□ -1.29
RPAIN-202ENST00000381208 Q6ZQY7 126 aa6.97□□□□□ -1.29
RPAIN-202ENST00000381208 KRTAP19-2Q3LHN2 52 aa6.96□□□□□ -1.29
RPAIN-202ENST00000381208 A0A0G2JQZ4 141 aa6.95□□□□□ -1.3
RPAIN-202ENST00000381208 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.95□□□□□ -1.3
RPAIN-202ENST00000381208 OBSCN-AS1Q96MR7 158 aa6.95□□□□□ -1.3
RPAIN-202ENST00000381208 PRO0628Q9UI54 55 aa6.95□□□□□ -1.3
RPAIN-202ENST00000381208 MT1HP80294 61 aa6.95□□□□□ -1.3
RPAIN-202ENST00000381208 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
RPAIN-202ENST00000381208 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
RPAIN-202ENST00000381208 IGFL1Q6UW32 110 aa6.91□□□□□ -1.3
RPAIN-202ENST00000381208 COX6B2Q6YFQ2 88 aa6.9□□□□□ -1.31
RPAIN-202ENST00000381208 PDE6GP18545 87 aa6.88□□□□□ -1.31
RPAIN-202ENST00000381208 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
RPAIN-202ENST00000381208 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
RPAIN-202ENST00000381208 C4orf26Q17RF5 130 aa6.87□□□□□ -1.31
RPAIN-202ENST00000381208 M0R2T5 61 aa6.86□□□□□ -1.31
RPAIN-202ENST00000381208 CCKP06307 115 aa6.86□□□□□ -1.31
RPAIN-202ENST00000381208 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
RPAIN-202ENST00000381208 ATP11AUNQ6ZP68 121 aa6.86□□□□□ -1.31
RPAIN-202ENST00000381208 Q75L30 129 aa6.86□□□□□ -1.31
RPAIN-202ENST00000381208 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
RPAIN-202ENST00000381208 LOC110117498A0A087WWA1 95 aa6.85□□□□□ -1.31
RPAIN-202ENST00000381208 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
RPAIN-202ENST00000381208 LINC00643Q86TS7 51 aa6.85□□□□□ -1.31
RPAIN-202ENST00000381208 KRTAP3-1Q9BYR8 98 aa6.85□□□□□ -1.31
RPAIN-202ENST00000381208 FSIP2Q5CZC0 6907 aa6.85□□□□□ -1.31
RPAIN-202ENST00000381208 Q6Q795 121 aa6.84□□□□□ -1.31
RPAIN-202ENST00000381208 DSCR8Q96T75 97 aa6.84□□□□□ -1.31
RPAIN-202ENST00000381208 KRTAP10-6P60371 365 aaPredicted RBP6.83□□□□□ -1.32
RPAIN-202ENST00000381208 J3KT08 172 aa6.82□□□□□ -1.32
RPAIN-202ENST00000381208 NDUFV3P56181 108 aaKnown RBP6.82□□□□□ -1.32
RPAIN-202ENST00000381208 IMUPQ9GZP8 106 aa6.82□□□□□ -1.32
RPAIN-202ENST00000381208 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
RPAIN-202ENST00000381208 Q6ZQT0 140 aa6.8□□□□□ -1.32
RPAIN-202ENST00000381208 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
RPAIN-202ENST00000381208 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
RPAIN-202ENST00000381208 Q96NJ1 140 aa6.78□□□□□ -1.32
RPAIN-202ENST00000381208 UBL5Q9BZL1 73 aa6.78□□□□□ -1.32
RPAIN-202ENST00000381208 ANAPC13Q9BS18 74 aa6.77□□□□□ -1.33
RPAIN-202ENST00000381208 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
RPAIN-202ENST00000381208 A0A1B0GW54 56 aa6.76□□□□□ -1.33
RPAIN-202ENST00000381208 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
RPAIN-202ENST00000381208 A0A087WSZ3 146 aa6.75□□□□□ -1.33
RPAIN-202ENST00000381208 A8MUU9 505 aa6.73□□□□□ -1.33
RPAIN-202ENST00000381208 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
RPAIN-202ENST00000381208 A0A1W2PNM2 257 aa6.68□□□□□ -1.34
RPAIN-202ENST00000381208 CXCL6P80162 114 aa6.68□□□□□ -1.34
RPAIN-202ENST00000381208 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
RPAIN-202ENST00000381208 LINC00313P59037 77 aa6.67□□□□□ -1.34
RPAIN-202ENST00000381208 Q6ZVQ6 151 aa6.67□□□□□ -1.34
RPAIN-202ENST00000381208 FAM236AA0A1B0GUQ0 79 aa6.65□□□□□ -1.35
RPAIN-202ENST00000381208 FAM236BA0A1B0GV22 79 aa6.65□□□□□ -1.35
RPAIN-202ENST00000381208 DSCR10P59022 87 aa6.65□□□□□ -1.35
RPAIN-202ENST00000381208 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
RPAIN-202ENST00000381208 PMAIP1Q13794 54 aa6.64□□□□□ -1.35
RPAIN-202ENST00000381208 FAM236DA0A1B0GTK5 79 aa6.63□□□□□ -1.35
RPAIN-202ENST00000381208 ATOX1O00244 68 aa6.63□□□□□ -1.35
RPAIN-202ENST00000381208 FAM236CP0DP71 79 aa6.63□□□□□ -1.35
RPAIN-202ENST00000381208 NREPQ16612 68 aa6.63□□□□□ -1.35
RPAIN-202ENST00000381208 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
RPAIN-202ENST00000381208 LINC00472Q9H8W2 130 aa6.58□□□□□ -1.36
RPAIN-202ENST00000381208 KRTAP16-1A8MUX0 517 aa6.57□□□□□ -1.36
RPAIN-202ENST00000381208 BPY2O14599 106 aa6.57□□□□□ -1.36
RPAIN-202ENST00000381208 RBM12B-AS1Q9P1G2 102 aa6.57□□□□□ -1.36
RPAIN-202ENST00000381208 C8orf87E5RJ46 101 aa6.57□□□□□ -1.36
RPAIN-202ENST00000381208 A0A087WVE0 104 aa6.56□□□□□ -1.36
RPAIN-202ENST00000381208 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
RPAIN-202ENST00000381208 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
RPAIN-202ENST00000381208 UQCRQO14949 82 aa6.53□□□□□ -1.36
RPAIN-202ENST00000381208 DEFB116Q30KQ4 102 aa6.53□□□□□ -1.36
RPAIN-202ENST00000381208 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
RPAIN-202ENST00000381208 NOTCH2NLQ7Z3S9 236 aa6.52□□□□□ -1.37
RPAIN-202ENST00000381208 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
RPAIN-202ENST00000381208 COX7CP15954 63 aa6.51□□□□□ -1.37
RPAIN-202ENST00000381208 SERP2Q8N6R1 65 aa6.51□□□□□ -1.37
RPAIN-202ENST00000381208 HRES1P13985 223 aa6.5□□□□□ -1.37
RPAIN-202ENST00000381208 NDUFB1O75438 58 aa6.47□□□□□ -1.37
RPAIN-202ENST00000381208 TRAV7A0A075B6U4 112 aa6.46□□□□□ -1.37
RPAIN-202ENST00000381208 ZCCHC13Q8WW36 166 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms