RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NBDYA0A0U1RRE5 68 aa8.37□□□□□ -1.07
SDC1-202ENST00000381150 LINC00313P59037 77 aa8.37□□□□□ -1.07
SDC1-202ENST00000381150 PANO1I0J062 215 aa8.36□□□□□ -1.07
SDC1-202ENST00000381150 MRPL34Q9BQ48 92 aaKnown RBP8.35□□□□□ -1.07
SDC1-202ENST00000381150 TGP01266 2768 aa8.35□□□□□ -1.07
SDC1-202ENST00000381150 NUPR2A6NF83 97 aa8.34□□□□□ -1.08
SDC1-202ENST00000381150 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
SDC1-202ENST00000381150 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
SDC1-202ENST00000381150 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
SDC1-202ENST00000381150 KMT2AQ03164 3969 aa8.29□□□□□ -1.08
SDC1-202ENST00000381150 SPRR1BP22528 89 aa8.29□□□□□ -1.08
SDC1-202ENST00000381150 Q5W150 140 aa8.29□□□□□ -1.08
SDC1-202ENST00000381150 Q96NJ1 140 aa8.29□□□□□ -1.08
SDC1-202ENST00000381150 A0A1B0GU69 56 aa8.28□□□□□ -1.08
SDC1-202ENST00000381150 MEGF8Q7Z7M0 2845 aa8.27□□□□□ -1.09
SDC1-202ENST00000381150 C8orf87E5RJ46 101 aa8.27□□□□□ -1.09
SDC1-202ENST00000381150 Q6ZR54 194 aa8.26□□□□□ -1.09
SDC1-202ENST00000381150 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
SDC1-202ENST00000381150 ACYP2P14621 99 aa8.25□□□□□ -1.09
SDC1-202ENST00000381150 KRTAP13-1Q8IUC0 172 aa8.25□□□□□ -1.09
SDC1-202ENST00000381150 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
SDC1-202ENST00000381150 FBN3Q75N90 2809 aa8.24□□□□□ -1.09
SDC1-202ENST00000381150 SPACA4Q8TDM5 124 aa8.23□□□□□ -1.09
SDC1-202ENST00000381150 DNHD1Q96M86 4753 aa8.22□□□□□ -1.09
SDC1-202ENST00000381150 A0A087WTM6 91 aa8.21□□□□□ -1.09
SDC1-202ENST00000381150 SPINK1P00995 79 aa8.21□□□□□ -1.09
SDC1-202ENST00000381150 PLAC8Q9NZF1 115 aa8.21□□□□□ -1.1
SDC1-202ENST00000381150 DNAH17Q9UFH2 4485 aa8.21□□□□□ -1.1
SDC1-202ENST00000381150 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
SDC1-202ENST00000381150 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
SDC1-202ENST00000381150 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
SDC1-202ENST00000381150 IGKV2D-30A0A075B6S6 120 aa8.17□□□□□ -1.1
SDC1-202ENST00000381150 IGKV2-30P06310 120 aa8.17□□□□□ -1.1
SDC1-202ENST00000381150 DNAH8Q96JB1 4490 aa8.16□□□□□ -1.1
SDC1-202ENST00000381150 FRAS1Q86XX4 4008 aa8.16□□□□□ -1.1
SDC1-202ENST00000381150 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.1
SDC1-202ENST00000381150 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
SDC1-202ENST00000381150 WWC2-AS2Q96NR7 200 aa8.15□□□□□ -1.11
SDC1-202ENST00000381150 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
SDC1-202ENST00000381150 RTL8CO15255 209 aa8.13□□□□□ -1.11
SDC1-202ENST00000381150 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
SDC1-202ENST00000381150 H3BS24 57 aa8.11□□□□□ -1.11
SDC1-202ENST00000381150 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
SDC1-202ENST00000381150 CSAG1Q6PB30 78 aa8.11□□□□□ -1.11
SDC1-202ENST00000381150 UQCR11O14957 56 aa8.1□□□□□ -1.11
SDC1-202ENST00000381150 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
SDC1-202ENST00000381150 IGLV5-52A0A0A0MRZ9 124 aa8.08□□□□□ -1.12
SDC1-202ENST00000381150 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
SDC1-202ENST00000381150 ZNF861PO60384 105 aa8.06□□□□□ -1.12
SDC1-202ENST00000381150 C1orf134Q5TEV5 83 aa8.05□□□□□ -1.12
SDC1-202ENST00000381150 PLA2G1BP04054 148 aaKnown RBP8.04□□□□□ -1.12
SDC1-202ENST00000381150 DNAH11Q96DT5 4516 aa8.04□□□□□ -1.12
SDC1-202ENST00000381150 DMAC1Q96GE9 116 aa8.03□□□□□ -1.12
SDC1-202ENST00000381150 DNAH5Q8TE73 4624 aa8.03□□□□□ -1.12
SDC1-202ENST00000381150 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.13
SDC1-202ENST00000381150 FAM229AH3BQW9 127 aa8□□□□□ -1.13
SDC1-202ENST00000381150 SPATA8Q6RVD6 105 aa7.99□□□□□ -1.13
SDC1-202ENST00000381150 Q8N1X5 172 aa7.99□□□□□ -1.13
SDC1-202ENST00000381150 LY6G6CO95867 125 aa7.99□□□□□ -1.13
SDC1-202ENST00000381150 PKD1P98161 4303 aa7.98□□□□□ -1.13
SDC1-202ENST00000381150 HYDINQ4G0P3 5121 aa7.97□□□□□ -1.13
SDC1-202ENST00000381150 KRTAP10-2P60368 255 aa7.96□□□□□ -1.14
SDC1-202ENST00000381150 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
SDC1-202ENST00000381150 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
SDC1-202ENST00000381150 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
SDC1-202ENST00000381150 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
SDC1-202ENST00000381150 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
SDC1-202ENST00000381150 Q6ZSA8 131 aa7.88□□□□□ -1.15
SDC1-202ENST00000381150 KRTAP10-1P60331 282 aa7.85□□□□□ -1.15
SDC1-202ENST00000381150 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
SDC1-202ENST00000381150 KRTAP21-3Q3LHN1 58 aa7.81□□□□□ -1.16
SDC1-202ENST00000381150 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
SDC1-202ENST00000381150 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
SDC1-202ENST00000381150 KRTAP1-4P0C5Y4 121 aa7.74□□□□□ -1.17
SDC1-202ENST00000381150 TYMSOSQ8TAI1 123 aa7.73□□□□□ -1.17
SDC1-202ENST00000381150 SACSQ9NZJ4 4579 aa7.72□□□□□ -1.17
SDC1-202ENST00000381150 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
SDC1-202ENST00000381150 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
SDC1-202ENST00000381150 H0YAA0 97 aa7.69□□□□□ -1.18
SDC1-202ENST00000381150 A0A1B0GU33 70 aa7.69□□□□□ -1.18
SDC1-202ENST00000381150 KRTAP16-1A8MUX0 517 aa7.69□□□□□ -1.18
SDC1-202ENST00000381150 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
SDC1-202ENST00000381150 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
SDC1-202ENST00000381150 K7ERS5 55 aa7.63□□□□□ -1.19
SDC1-202ENST00000381150 A8MUU9 505 aa7.62□□□□□ -1.19
SDC1-202ENST00000381150 ROMO1P60602 79 aa7.62□□□□□ -1.19
SDC1-202ENST00000381150 DYNC1H1Q14204 4646 aaKnown RBP7.6□□□□□ -1.19
SDC1-202ENST00000381150 A0A0D9SG42 100 aa7.58□□□□□ -1.2
SDC1-202ENST00000381150 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
SDC1-202ENST00000381150 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
SDC1-202ENST00000381150 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
SDC1-202ENST00000381150 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
SDC1-202ENST00000381150 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.2
SDC1-202ENST00000381150 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
SDC1-202ENST00000381150 FAT1Q14517 4588 aa7.5□□□□□ -1.21
SDC1-202ENST00000381150 RYR2Q92736 4967 aa7.49□□□□□ -1.21
SDC1-202ENST00000381150 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
SDC1-202ENST00000381150 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
SDC1-202ENST00000381150 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
SDC1-202ENST00000381150 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms