RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 TRIOO75962 3097 aa4.55□□□□□ -1.68
FREM1-201ENST00000380875 UBR5O95071 2799 aaPredicted RBP4.52□□□□□ -1.69
FREM1-201ENST00000380875 XIRP2A4UGR9 3374 aa4.51□□□□□ -1.69
FREM1-201ENST00000380875 BRCA2P51587 3418 aa4.51□□□□□ -1.69
FREM1-201ENST00000380875 LAMA1P25391 3075 aa4.5□□□□□ -1.69
FREM1-201ENST00000380875 HIVEP1P15822 2718 aa4.5□□□□□ -1.69
FREM1-201ENST00000380875 VPS13AQ96RL7 3174 aa4.49□□□□□ -1.69
FREM1-201ENST00000380875 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
FREM1-201ENST00000380875 ITPR1Q14643 2758 aa4.47□□□□□ -1.69
FREM1-201ENST00000380875 TENM4Q6N022 2769 aa4.47□□□□□ -1.69
FREM1-201ENST00000380875 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
FREM1-201ENST00000380875 REV3LO60673 3130 aa4.46□□□□□ -1.7
FREM1-201ENST00000380875 UTP20O75691 2785 aaKnown RBP4.45□□□□□ -1.7
FREM1-201ENST00000380875 KRTAP15-1Q3LI76 137 aa4.45□□□□□ -1.7
FREM1-201ENST00000380875 CDH23Q9H251 3354 aa4.45□□□□□ -1.7
FREM1-201ENST00000380875 NBEAQ8NFP9 2946 aa4.45□□□□□ -1.7
FREM1-201ENST00000380875 CELSR3Q9NYQ7 3312 aa4.45□□□□□ -1.7
FREM1-201ENST00000380875 APCP25054 2843 aa4.43□□□□□ -1.7
FREM1-201ENST00000380875 COL6A3P12111 3177 aa4.43□□□□□ -1.7
FREM1-201ENST00000380875 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
FREM1-201ENST00000380875 LRBAP50851 2863 aa4.4□□□□□ -1.71
FREM1-201ENST00000380875 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
FREM1-201ENST00000380875 EYSQ5T1H1 3165 aa4.38□□□□□ -1.71
FREM1-201ENST00000380875 KALRNO60229 2985 aa4.36□□□□□ -1.71
FREM1-201ENST00000380875 DNAH14Q0VDD8 3507 aa4.36□□□□□ -1.71
FREM1-201ENST00000380875 TACC2O95359 2948 aa4.35□□□□□ -1.71
FREM1-201ENST00000380875 USP34Q70CQ2 3546 aa4.34□□□□□ -1.71
FREM1-201ENST00000380875 ATMQ13315 3056 aa4.34□□□□□ -1.72
FREM1-201ENST00000380875 SZT2Q5T011 3432 aa4.33□□□□□ -1.72
FREM1-201ENST00000380875 COL12A1Q99715 3063 aa4.33□□□□□ -1.72
FREM1-201ENST00000380875 CFAP47Q6ZTR5 3102 aa4.3□□□□□ -1.72
FREM1-201ENST00000380875 KRTAP12-1P59990 96 aa4.3□□□□□ -1.72
FREM1-201ENST00000380875 VCANP13611 3396 aa4.28□□□□□ -1.72
FREM1-201ENST00000380875 TNRC18O15417 2968 aaPredicted RBP4.28□□□□□ -1.72
FREM1-201ENST00000380875 KRTAP4-5Q9BYR2 181 aa4.27□□□□□ -1.73
FREM1-201ENST00000380875 ASH1LQ9NR48 2969 aaKnown RBP4.27□□□□□ -1.73
FREM1-201ENST00000380875 SPTBN5Q9NRC6 3674 aaKnown RBP4.26□□□□□ -1.73
FREM1-201ENST00000380875 FRYLO94915 3013 aa4.26□□□□□ -1.73
FREM1-201ENST00000380875 DMXL2Q8TDJ6 3036 aa4.25□□□□□ -1.73
FREM1-201ENST00000380875 TENM1Q9UKZ4 2725 aa4.23□□□□□ -1.73
FREM1-201ENST00000380875 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
FREM1-201ENST00000380875 FLNCQ14315 2725 aa4.23□□□□□ -1.73
FREM1-201ENST00000380875 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
FREM1-201ENST00000380875 SPEGQ15772 3267 aa4.22□□□□□ -1.73
FREM1-201ENST00000380875 BOD1L1Q8NFC6 3051 aa4.2□□□□□ -1.74
FREM1-201ENST00000380875 WDFY3Q8IZQ1 3526 aa4.2□□□□□ -1.74
FREM1-201ENST00000380875 KRTAP3-1Q9BYR8 98 aa4.2□□□□□ -1.74
FREM1-201ENST00000380875 NBPF19A0A087WUL8 3843 aa4.18□□□□□ -1.74
FREM1-201ENST00000380875 ADGRG4Q8IZF6 3080 aa4.18□□□□□ -1.74
FREM1-201ENST00000380875 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
FREM1-201ENST00000380875 CELSR2Q9HCU4 2923 aa4.15□□□□□ -1.74
FREM1-201ENST00000380875 ALMS1Q8TCU4 4167 aa4.14□□□□□ -1.75
FREM1-201ENST00000380875 DCHS2Q6V1P9 2916 aa4.14□□□□□ -1.75
FREM1-201ENST00000380875 NIPBLQ6KC79 2804 aaeCLIP4.12□□□□□ -1.75
FREM1-201ENST00000380875 ZZEF1O43149 2961 aa4.12□□□□□ -1.75
FREM1-201ENST00000380875 MYO15AQ9UKN7 3530 aa4.11□□□□□ -1.75
FREM1-201ENST00000380875 TENM3Q9P273 2699 aa4.11□□□□□ -1.75
FREM1-201ENST00000380875 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
FREM1-201ENST00000380875 DMXL1Q9Y485 3027 aa4.1□□□□□ -1.75
FREM1-201ENST00000380875 NF1P21359 2839 aa4.09□□□□□ -1.75
FREM1-201ENST00000380875 DMDP11532 3685 aa4.08□□□□□ -1.76
FREM1-201ENST00000380875 ANK3Q12955 4377 aaKnown RBP4.08□□□□□ -1.76
FREM1-201ENST00000380875 MUC3AQ02505 3323 aa4.08□□□□□ -1.76
FREM1-201ENST00000380875 CELSR1Q9NYQ6 3014 aa4.07□□□□□ -1.76
FREM1-201ENST00000380875 TGP01266 2768 aa4.06□□□□□ -1.76
FREM1-201ENST00000380875 HRNRQ86YZ3 2850 aaPredicted RBP4.04□□□□□ -1.76
FREM1-201ENST00000380875 KRTAP10-6P60371 365 aaPredicted RBP4.04□□□□□ -1.76
FREM1-201ENST00000380875 SPENQ96T58 3664 aaKnown RBP4.03□□□□□ -1.77
FREM1-201ENST00000380875 ASPMQ8IZT6 3477 aa4.02□□□□□ -1.77
FREM1-201ENST00000380875 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
FREM1-201ENST00000380875 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
FREM1-201ENST00000380875 ZANQ9Y493 2812 aa3.97□□□□□ -1.77
FREM1-201ENST00000380875 PKD1L1Q8TDX9 2849 aa3.97□□□□□ -1.77
FREM1-201ENST00000380875 DCHS1Q96JQ0 3298 aa3.96□□□□□ -1.78
FREM1-201ENST00000380875 VWFP04275 2813 aa3.96□□□□□ -1.78
FREM1-201ENST00000380875 HUWE1Q7Z6Z7 4374 aaKnown RBP3.95□□□□□ -1.78
FREM1-201ENST00000380875 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
FREM1-201ENST00000380875 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
FREM1-201ENST00000380875 FBN2P35556 2912 aa3.93□□□□□ -1.78
FREM1-201ENST00000380875 PDZD2O15018 2839 aa3.92□□□□□ -1.78
FREM1-201ENST00000380875 MXRA5Q9NR99 2828 aa3.92□□□□□ -1.78
FREM1-201ENST00000380875 LOC400499M0QZD8 3231 aa3.92□□□□□ -1.78
FREM1-201ENST00000380875 KRTAP3-3Q9BYR6 98 aa3.91□□□□□ -1.78
FREM1-201ENST00000380875 ZFHX3Q15911 3703 aa3.9□□□□□ -1.79
FREM1-201ENST00000380875 ZFHX4Q86UP3 3567 aa3.89□□□□□ -1.79
FREM1-201ENST00000380875 INE1O15225 51 aa3.88□□□□□ -1.79
FREM1-201ENST00000380875 KRTAP3-2Q9BYR7 98 aa3.87□□□□□ -1.79
FREM1-201ENST00000380875 RELNP78509 3460 aa3.86□□□□□ -1.79
FREM1-201ENST00000380875 SPRR2FQ96RM1 72 aa3.84□□□□□ -1.79
FREM1-201ENST00000380875 CSMD1Q96PZ7 3565 aa3.83□□□□□ -1.8
FREM1-201ENST00000380875 MT1HP80294 61 aa3.83□□□□□ -1.8
FREM1-201ENST00000380875 FBN1P35555 2871 aaKnown RBP3.81□□□□□ -1.8
FREM1-201ENST00000380875 FBN3Q75N90 2809 aa3.79□□□□□ -1.8
FREM1-201ENST00000380875 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
FREM1-201ENST00000380875 OTOGQ6ZRI0 2925 aa3.77□□□□□ -1.81
FREM1-201ENST00000380875 KRTAP23-1A1A580 65 aa3.73□□□□□ -1.81
FREM1-201ENST00000380875 CUBNO60494 3623 aa3.72□□□□□ -1.81
FREM1-201ENST00000380875 SPRR2EP22531 72 aa3.71□□□□□ -1.81
FREM1-201ENST00000380875 SPRR2BP35325 72 aa3.71□□□□□ -1.81
FREM1-201ENST00000380875 SPRR2AP35326 72 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 371 ms