RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 KRTAP4-12Q9BQ66 201 aa7.87□□□□□ -1.15
HMGN1-203ENST00000380748 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
HMGN1-203ENST00000380748 Q5VV11 94 aa7.86□□□□□ -1.15
HMGN1-203ENST00000380748 HIST1H4GQ99525 98 aa7.84□□□□□ -1.15
HMGN1-203ENST00000380748 TRACP01848 142 aa7.83□□□□□ -1.16
HMGN1-203ENST00000380748 COA6Q5JTJ3 125 aaKnown RBP7.83□□□□□ -1.16
HMGN1-203ENST00000380748 CCKP06307 115 aa7.82□□□□□ -1.16
HMGN1-203ENST00000380748 LYRM7Q5U5X0 104 aa7.8□□□□□ -1.16
HMGN1-203ENST00000380748 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
HMGN1-203ENST00000380748 A0A1B0GX51 115 aa7.78□□□□□ -1.16
HMGN1-203ENST00000380748 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
HMGN1-203ENST00000380748 HSBP1L1C9JCN9 74 aa7.74□□□□□ -1.17
HMGN1-203ENST00000380748 IGKV3D-7A0A0C4DH55 119 aa7.73□□□□□ -1.17
HMGN1-203ENST00000380748 FAM236AA0A1B0GUQ0 79 aa7.73□□□□□ -1.17
HMGN1-203ENST00000380748 FAM236BA0A1B0GV22 79 aa7.73□□□□□ -1.17
HMGN1-203ENST00000380748 SPRR2EP22531 72 aa7.73□□□□□ -1.17
HMGN1-203ENST00000380748 SPRR2BP35325 72 aa7.73□□□□□ -1.17
HMGN1-203ENST00000380748 SPRR2AP35326 72 aa7.73□□□□□ -1.17
HMGN1-203ENST00000380748 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
HMGN1-203ENST00000380748 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
HMGN1-203ENST00000380748 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
HMGN1-203ENST00000380748 VPS25Q9BRG1 176 aa7.71□□□□□ -1.18
HMGN1-203ENST00000380748 KRTAP2-2Q9BYT5 123 aa7.71□□□□□ -1.18
HMGN1-203ENST00000380748 KRTAP2-1Q9BYU5 128 aa7.71□□□□□ -1.18
HMGN1-203ENST00000380748 J3KT08 172 aa7.7□□□□□ -1.18
HMGN1-203ENST00000380748 ORMDL1Q9P0S3 153 aa7.7□□□□□ -1.18
HMGN1-203ENST00000380748 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
HMGN1-203ENST00000380748 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
HMGN1-203ENST00000380748 TRIAP1O43715 76 aa7.66□□□□□ -1.18
HMGN1-203ENST00000380748 DNAL4O96015 105 aa7.66□□□□□ -1.18
HMGN1-203ENST00000380748 NDUFB1O75438 58 aa7.65□□□□□ -1.18
HMGN1-203ENST00000380748 TMEM256-PLSCR3K7ERE1 68 aa7.64□□□□□ -1.19
HMGN1-203ENST00000380748 C5orf47Q569G3 176 aa7.64□□□□□ -1.19
HMGN1-203ENST00000380748 H3BQ85 93 aa7.63□□□□□ -1.19
HMGN1-203ENST00000380748 COX8AP10176 69 aa7.63□□□□□ -1.19
HMGN1-203ENST00000380748 GPR98Q8WXG9 6306 aa7.62□□□□□ -1.19
HMGN1-203ENST00000380748 Q6ZVQ6 151 aa7.62□□□□□ -1.19
HMGN1-203ENST00000380748 PRO1854Q9UHT4 67 aa7.61□□□□□ -1.19
HMGN1-203ENST00000380748 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
HMGN1-203ENST00000380748 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
HMGN1-203ENST00000380748 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
HMGN1-203ENST00000380748 UBE2V1Q13404 147 aa7.58□□□□□ -1.2
HMGN1-203ENST00000380748 HIST1H2BLQ99880 126 aa7.58□□□□□ -1.2
HMGN1-203ENST00000380748 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
HMGN1-203ENST00000380748 DLEU1O43261 78 aa7.57□□□□□ -1.2
HMGN1-203ENST00000380748 IGKV2-30P06310 120 aa7.57□□□□□ -1.2
HMGN1-203ENST00000380748 Q6ZQT0 140 aa7.57□□□□□ -1.2
HMGN1-203ENST00000380748 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
HMGN1-203ENST00000380748 HIST3H2BBQ8N257 126 aa7.55□□□□□ -1.2
HMGN1-203ENST00000380748 LCE1AQ5T7P2 110 aa7.54□□□□□ -1.2
HMGN1-203ENST00000380748 C2orf91Q6ZV80 131 aa7.54□□□□□ -1.2
HMGN1-203ENST00000380748 HIGD1BQ9P298 99 aa7.53□□□□□ -1.2
HMGN1-203ENST00000380748 C4orf26Q17RF5 130 aa7.52□□□□□ -1.21
HMGN1-203ENST00000380748 CEND1Q8N111 149 aa7.52□□□□□ -1.21
HMGN1-203ENST00000380748 C14orf144Q96I85 54 aa7.52□□□□□ -1.21
HMGN1-203ENST00000380748 C21orf62-AS1Q17RA5 79 aa7.51□□□□□ -1.21
HMGN1-203ENST00000380748 C7orf65Q6ZTY9 151 aa7.51□□□□□ -1.21
HMGN1-203ENST00000380748 MRPL34Q9BQ48 92 aaKnown RBP7.51□□□□□ -1.21
HMGN1-203ENST00000380748 S100A2P29034 98 aa7.5□□□□□ -1.21
HMGN1-203ENST00000380748 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
HMGN1-203ENST00000380748 PSMB2P49721 201 aa7.49□□□□□ -1.21
HMGN1-203ENST00000380748 FXYD2P54710 66 aa7.49□□□□□ -1.21
HMGN1-203ENST00000380748 TMEM254Q8TBM7 123 aa7.49□□□□□ -1.21
HMGN1-203ENST00000380748 SPRR2DP22532 72 aa7.48□□□□□ -1.21
HMGN1-203ENST00000380748 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
HMGN1-203ENST00000380748 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
HMGN1-203ENST00000380748 C9JAW5 83 aa7.47□□□□□ -1.21
HMGN1-203ENST00000380748 NDUFS5O43920 106 aa7.47□□□□□ -1.21
HMGN1-203ENST00000380748 PRR15Q8IV56 129 aa7.47□□□□□ -1.21
HMGN1-203ENST00000380748 Q5W150 140 aa7.45□□□□□ -1.22
HMGN1-203ENST00000380748 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
HMGN1-203ENST00000380748 S4R3F8 94 aa7.44□□□□□ -1.22
HMGN1-203ENST00000380748 K7ERJ3 54 aa7.42□□□□□ -1.22
HMGN1-203ENST00000380748 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
HMGN1-203ENST00000380748 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
HMGN1-203ENST00000380748 COX6CP09669 75 aa7.41□□□□□ -1.22
HMGN1-203ENST00000380748 hDV103S1A0JD37 113 aa7.4□□□□□ -1.22
HMGN1-203ENST00000380748 LCA10Q71F78 164 aa7.4□□□□□ -1.22
HMGN1-203ENST00000380748 KRTAP3-1Q9BYR8 98 aa7.4□□□□□ -1.22
HMGN1-203ENST00000380748 PAM16Q9Y3D7 125 aa7.39□□□□□ -1.23
HMGN1-203ENST00000380748 SPATA45Q537H7 98 aa7.37□□□□□ -1.23
HMGN1-203ENST00000380748 S100A1P23297 94 aa7.36□□□□□ -1.23
HMGN1-203ENST00000380748 BAALC-AS2P0C853 105 aa7.33□□□□□ -1.24
HMGN1-203ENST00000380748 K7EQZ3 153 aa7.32□□□□□ -1.24
HMGN1-203ENST00000380748 A0A1B0GW54 56 aa7.31□□□□□ -1.24
HMGN1-203ENST00000380748 CRIPTQ9P021 101 aa7.29□□□□□ -1.24
HMGN1-203ENST00000380748 LOC110117498A0A087WWA1 95 aa7.28□□□□□ -1.24
HMGN1-203ENST00000380748 MT1XP80297 61 aa7.28□□□□□ -1.24
HMGN1-203ENST00000380748 NREPQ16612 68 aa7.28□□□□□ -1.24
HMGN1-203ENST00000380748 LCE1DQ5T752 114 aa7.28□□□□□ -1.24
HMGN1-203ENST00000380748 LCE4AQ5TA78 99 aa7.27□□□□□ -1.25
HMGN1-203ENST00000380748 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
HMGN1-203ENST00000380748 S100A6P06703 90 aa7.26□□□□□ -1.25
HMGN1-203ENST00000380748 SCGB1C2P0DMR2 95 aa7.26□□□□□ -1.25
HMGN1-203ENST00000380748 C1orf64Q8NEQ6 169 aa7.26□□□□□ -1.25
HMGN1-203ENST00000380748 VAMP8Q9BV40 100 aa7.26□□□□□ -1.25
HMGN1-203ENST00000380748 HSD52Q0P140 79 aa7.23□□□□□ -1.25
HMGN1-203ENST00000380748 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
HMGN1-203ENST00000380748 HCG22E2RYF7 251 aa7.22□□□□□ -1.25
HMGN1-203ENST00000380748 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms