RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 NDUFS5O43920 106 aa11.82□□□□□ -0.52
EBF1-202ENST00000380654 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
EBF1-202ENST00000380654 FAT2Q9NYQ8 4349 aa11.82□□□□□ -0.52
EBF1-202ENST00000380654 SPANXA2-OT1Q8N9U9 137 aa11.81□□□□□ -0.52
EBF1-202ENST00000380654 TP53AIP1Q9HCN2 124 aa11.78□□□□□ -0.52
EBF1-202ENST00000380654 PCOTHQ58A44 107 aa11.77□□□□□ -0.52
EBF1-202ENST00000380654 MRPL34Q9BQ48 92 aaKnown RBP11.77□□□□□ -0.53
EBF1-202ENST00000380654 Q1T7F1 81 aa11.75□□□□□ -0.53
EBF1-202ENST00000380654 BRK1Q8WUW1 75 aa11.74□□□□□ -0.53
EBF1-202ENST00000380654 PRO0628Q9UI54 55 aa11.73□□□□□ -0.53
EBF1-202ENST00000380654 KRTAP10-1P60331 282 aa11.72□□□□□ -0.53
EBF1-202ENST00000380654 CD164Q04900 197 aa11.72□□□□□ -0.53
EBF1-202ENST00000380654 VPS13BQ7Z7G8 4022 aa11.7□□□□□ -0.54
EBF1-202ENST00000380654 PSPHP1O15172 72 aa11.7□□□□□ -0.54
EBF1-202ENST00000380654 IGLV7-46A0A075B6I9 117 aa11.69□□□□□ -0.54
EBF1-202ENST00000380654 SSBP3-AS1Q7Z2R9 100 aa11.68□□□□□ -0.54
EBF1-202ENST00000380654 Q6ZSA8 131 aa11.66□□□□□ -0.54
EBF1-202ENST00000380654 KRTAP13-2Q52LG2 175 aa11.65□□□□□ -0.54
EBF1-202ENST00000380654 Q5W150 140 aa11.63□□□□□ -0.55
EBF1-202ENST00000380654 COA5Q86WW8 74 aa11.62□□□□□ -0.55
EBF1-202ENST00000380654 A8MUN3 132 aa11.6□□□□□ -0.55
EBF1-202ENST00000380654 PKHD1P08F94 4074 aa11.59□□□□□ -0.55
EBF1-202ENST00000380654 Q8N9P0 234 aaPredicted RBP11.58□□□□□ -0.56
EBF1-202ENST00000380654 KRTAP13-3Q3SY46 172 aa11.56□□□□□ -0.56
EBF1-202ENST00000380654 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
EBF1-202ENST00000380654 C1orf195Q5TG92 126 aa11.53□□□□□ -0.56
EBF1-202ENST00000380654 V9GYY9 64 aa11.53□□□□□ -0.56
EBF1-202ENST00000380654 C8orf87E5RJ46 101 aa11.51□□□□□ -0.57
EBF1-202ENST00000380654 LINC00313P59037 77 aa11.51□□□□□ -0.57
EBF1-202ENST00000380654 Q5VV11 94 aa11.51□□□□□ -0.57
EBF1-202ENST00000380654 LOC101927531A0A1B0GV80 90 aa11.49□□□□□ -0.57
EBF1-202ENST00000380654 SACSQ9NZJ4 4579 aa11.49□□□□□ -0.57
EBF1-202ENST00000380654 HRES1P13985 223 aa11.47□□□□□ -0.57
EBF1-202ENST00000380654 RETNLBQ9BQ08 111 aa11.47□□□□□ -0.57
EBF1-202ENST00000380654 PRR15LQ9BU68 103 aa11.46□□□□□ -0.57
EBF1-202ENST00000380654 LIMD2Q9BT23 127 aa11.46□□□□□ -0.58
EBF1-202ENST00000380654 PLA2G1BP04054 148 aaKnown RBP11.42□□□□□ -0.58
EBF1-202ENST00000380654 A8MU10 97 aa11.41□□□□□ -0.58
EBF1-202ENST00000380654 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
EBF1-202ENST00000380654 KRTAP16-1A8MUX0 517 aa11.38□□□□□ -0.59
EBF1-202ENST00000380654 CHKB-CPT1BH3BT56 60 aa11.38□□□□□ -0.59
EBF1-202ENST00000380654 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
EBF1-202ENST00000380654 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
EBF1-202ENST00000380654 DYNC1H1Q14204 4646 aaKnown RBP11.34□□□□□ -0.59
EBF1-202ENST00000380654 C4orf48Q5BLP8 95 aa11.32□□□□□ -0.6
EBF1-202ENST00000380654 PRR26Q8N8Z3 221 aa11.31□□□□□ -0.6
EBF1-202ENST00000380654 Q75L30 129 aa11.3□□□□□ -0.6
EBF1-202ENST00000380654 LINC01558Q9Y6Z2 57 aa11.29□□□□□ -0.6
EBF1-202ENST00000380654 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
EBF1-202ENST00000380654 FAT1Q14517 4588 aa11.27□□□□□ -0.6
EBF1-202ENST00000380654 SMR3BP02814 79 aaPredicted RBP11.27□□□□□ -0.61
EBF1-202ENST00000380654 SPINK1P00995 79 aa11.26□□□□□ -0.61
EBF1-202ENST00000380654 ACYP2P14621 99 aa11.25□□□□□ -0.61
EBF1-202ENST00000380654 KRTAP21-3Q3LHN1 58 aa11.25□□□□□ -0.61
EBF1-202ENST00000380654 A6NED7 52 aa11.24□□□□□ -0.61
EBF1-202ENST00000380654 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
EBF1-202ENST00000380654 APOBP04114 4563 aaKnown RBP11.21□□□□□ -0.61
EBF1-202ENST00000380654 IGKV2D-30A0A075B6S6 120 aa11.21□□□□□ -0.62
EBF1-202ENST00000380654 LCA10Q71F78 164 aa11.21□□□□□ -0.62
EBF1-202ENST00000380654 LINC00304Q8N9R0 145 aa11.19□□□□□ -0.62
EBF1-202ENST00000380654 SPINK7P58062 85 aa11.14□□□□□ -0.63
EBF1-202ENST00000380654 PKHD1L1Q86WI1 4243 aa11.13□□□□□ -0.63
EBF1-202ENST00000380654 A0A1B0GVY2 172 aa11.1□□□□□ -0.63
EBF1-202ENST00000380654 SPTSSBQ8NFR3 76 aa11.1□□□□□ -0.63
EBF1-202ENST00000380654 KRTAP10-4P60372 401 aaPredicted RBP11.07□□□□□ -0.64
EBF1-202ENST00000380654 PMAIP1Q13794 54 aa11.07□□□□□ -0.64
EBF1-202ENST00000380654 CDC42SE1Q9NRR8 79 aa11.07□□□□□ -0.64
EBF1-202ENST00000380654 RYR2Q92736 4967 aa11.06□□□□□ -0.64
EBF1-202ENST00000380654 RPS29P62273 56 aaKnown RBP11.06□□□□□ -0.64
EBF1-202ENST00000380654 KMT2CQ8NEZ4 4911 aaKnown RBP11.05□□□□□ -0.64
EBF1-202ENST00000380654 C7orf65Q6ZTY9 151 aa11.03□□□□□ -0.64
EBF1-202ENST00000380654 C9orf92A6NGG3 77 aa11.02□□□□□ -0.65
EBF1-202ENST00000380654 ATP11AUNQ6ZP68 121 aa11□□□□□ -0.65
EBF1-202ENST00000380654 Q8N1X5 172 aa10.96□□□□□ -0.66
EBF1-202ENST00000380654 A0A1B0GU69 56 aa10.93□□□□□ -0.66
EBF1-202ENST00000380654 C20orf166-AS1Q96NR2 134 aa10.87□□□□□ -0.67
EBF1-202ENST00000380654 A6NN06 94 aa10.87□□□□□ -0.67
EBF1-202ENST00000380654 A8MUU9 505 aa10.87□□□□□ -0.67
EBF1-202ENST00000380654 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
EBF1-202ENST00000380654 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
EBF1-202ENST00000380654 TNXBP22105 4242 aa10.81□□□□□ -0.68
EBF1-202ENST00000380654 FAT3Q8TDW7 4589 aa10.78□□□□□ -0.68
EBF1-202ENST00000380654 HSPG2P98160 4391 aa10.77□□□□□ -0.69
EBF1-202ENST00000380654 KTN1-AS1Q86SY8 53 aa10.76□□□□□ -0.69
EBF1-202ENST00000380654 KRTAP3-1Q9BYR8 98 aa10.73□□□□□ -0.69
EBF1-202ENST00000380654 SPATA8Q6RVD6 105 aa10.71□□□□□ -0.69
EBF1-202ENST00000380654 UQCR11O14957 56 aa10.7□□□□□ -0.7
EBF1-202ENST00000380654 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
EBF1-202ENST00000380654 RYR3Q15413 4870 aa10.68□□□□□ -0.7
EBF1-202ENST00000380654 Q5VSD8 79 aa10.62□□□□□ -0.71
EBF1-202ENST00000380654 KRTAP10-8P60410 259 aa10.61□□□□□ -0.71
EBF1-202ENST00000380654 MYCBP2O75592 4640 aa10.6□□□□□ -0.71
EBF1-202ENST00000380654 SEC61GP60059 68 aa10.58□□□□□ -0.72
EBF1-202ENST00000380654 DMBT1Q9UGM3 2413 aaPredicted RBP10.58□□□□□ -0.72
EBF1-202ENST00000380654 RYR1P21817 5038 aa10.57□□□□□ -0.72
EBF1-202ENST00000380654 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
EBF1-202ENST00000380654 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
EBF1-202ENST00000380654 RBM12B-AS1Q9P1G2 102 aa10.49□□□□□ -0.73
EBF1-202ENST00000380654 KIAA1109Q2LD37 5005 aa10.47□□□□□ -0.73
EBF1-202ENST00000380654 ADM2Q7Z4H4 148 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms