RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 LINC00208Q96KT6 92 aa14.51□□□□□ -0.09
NDEL1-202ENST00000380025 A0A1B0GVY2 172 aa14.51□□□□□ -0.09
NDEL1-202ENST00000380025 DYNC1H1Q14204 4646 aaKnown RBP14.49□□□□□ -0.09
NDEL1-202ENST00000380025 H3BPC8 53 aa14.47□□□□□ -0.09
NDEL1-202ENST00000380025 TRAV22A0A0B4J277 110 aa14.46□□□□□ -0.09
NDEL1-202ENST00000380025 MRPL34Q9BQ48 92 aaKnown RBP14.45□□□□□ -0.1
NDEL1-202ENST00000380025 TP53AIP1Q9HCN2 124 aa14.45□□□□□ -0.1
NDEL1-202ENST00000380025 Q5XG85 94 aa14.44□□□□□ -0.1
NDEL1-202ENST00000380025 RYR2Q92736 4967 aa14.42□□□□□ -0.1
NDEL1-202ENST00000380025 PLA2G1BP04054 148 aaKnown RBP14.42□□□□□ -0.1
NDEL1-202ENST00000380025 C1orf64Q8NEQ6 169 aa14.4□□□□□ -0.1
NDEL1-202ENST00000380025 NDUFS5O43920 106 aa14.39□□□□□ -0.11
NDEL1-202ENST00000380025 C1orf195Q5TG92 126 aa14.38□□□□□ -0.11
NDEL1-202ENST00000380025 SMR3BP02814 79 aaPredicted RBP14.36□□□□□ -0.11
NDEL1-202ENST00000380025 TYMSOSQ8TAI1 123 aa14.34□□□□□ -0.11
NDEL1-202ENST00000380025 APOBP04114 4563 aaKnown RBP14.32□□□□□ -0.12
NDEL1-202ENST00000380025 C8orf87E5RJ46 101 aa14.32□□□□□ -0.12
NDEL1-202ENST00000380025 LIMD2Q9BT23 127 aa14.32□□□□□ -0.12
NDEL1-202ENST00000380025 KMT2CQ8NEZ4 4911 aaKnown RBP14.31□□□□□ -0.12
NDEL1-202ENST00000380025 CYP4F30PQ9H0H9 118 aa14.3□□□□□ -0.12
NDEL1-202ENST00000380025 PRR4Q16378 134 aa14.29□□□□□ -0.12
NDEL1-202ENST00000380025 SMIM26A0A096LP01 95 aa14.27□□□□□ -0.12
NDEL1-202ENST00000380025 C4orf48Q5BLP8 95 aa14.26□□□□□ -0.13
NDEL1-202ENST00000380025 SPANXA2-OT1Q8N9U9 137 aa14.25□□□□□ -0.13
NDEL1-202ENST00000380025 KRTAP10-4P60372 401 aaPredicted RBP14.24□□□□□ -0.13
NDEL1-202ENST00000380025 PRR26Q8N8Z3 221 aa14.24□□□□□ -0.13
NDEL1-202ENST00000380025 LINC00313P59037 77 aa14.24□□□□□ -0.13
NDEL1-202ENST00000380025 FP248Q71RG6 208 aaPredicted RBP14.24□□□□□ -0.13
NDEL1-202ENST00000380025 SPINK1P00995 79 aa14.23□□□□□ -0.13
NDEL1-202ENST00000380025 FAT1Q14517 4588 aa14.21□□□□□ -0.13
NDEL1-202ENST00000380025 C4orf26Q17RF5 130 aa14.19□□□□□ -0.14
NDEL1-202ENST00000380025 Q5W150 140 aa14.19□□□□□ -0.14
NDEL1-202ENST00000380025 KRTAP13-3Q3SY46 172 aa14.18□□□□□ -0.14
NDEL1-202ENST00000380025 PCOTHQ58A44 107 aa14.16□□□□□ -0.14
NDEL1-202ENST00000380025 LINC00304Q8N9R0 145 aa14.16□□□□□ -0.14
NDEL1-202ENST00000380025 Q8N9P0 234 aaPredicted RBP14.14□□□□□ -0.15
NDEL1-202ENST00000380025 KRTAP16-1A8MUX0 517 aa14.13□□□□□ -0.15
NDEL1-202ENST00000380025 IGLV7-46A0A075B6I9 117 aa14.1□□□□□ -0.15
NDEL1-202ENST00000380025 RPS29P62273 56 aaKnown RBP14.1□□□□□ -0.15
NDEL1-202ENST00000380025 SPAG11AQ6PDA7 123 aa14.09□□□□□ -0.15
NDEL1-202ENST00000380025 LOC101927531A0A1B0GV80 90 aa14.07□□□□□ -0.16
NDEL1-202ENST00000380025 PKHD1L1Q86WI1 4243 aa14.03□□□□□ -0.16
NDEL1-202ENST00000380025 FAM229AH3BQW9 127 aa14.02□□□□□ -0.17
NDEL1-202ENST00000380025 MPLKIPQ8TAP9 179 aa14.02□□□□□ -0.17
NDEL1-202ENST00000380025 RETNLBQ9BQ08 111 aa13.96□□□□□ -0.17
NDEL1-202ENST00000380025 RYR3Q15413 4870 aa13.92□□□□□ -0.18
NDEL1-202ENST00000380025 COA5Q86WW8 74 aa13.9□□□□□ -0.18
NDEL1-202ENST00000380025 Q1T7F1 81 aa13.88□□□□□ -0.19
NDEL1-202ENST00000380025 IGKV2-30P06310 120 aa13.86□□□□□ -0.19
NDEL1-202ENST00000380025 HSPG2P98160 4391 aa13.82□□□□□ -0.2
NDEL1-202ENST00000380025 HRES1P13985 223 aa13.8□□□□□ -0.2
NDEL1-202ENST00000380025 Q5VSD8 79 aa13.78□□□□□ -0.2
NDEL1-202ENST00000380025 IGKV2D-30A0A075B6S6 120 aa13.72□□□□□ -0.21
NDEL1-202ENST00000380025 SVIPQ8NHG7 77 aa13.72□□□□□ -0.21
NDEL1-202ENST00000380025 C9orf92A6NGG3 77 aa13.71□□□□□ -0.21
NDEL1-202ENST00000380025 V9GYY9 64 aa13.71□□□□□ -0.21
NDEL1-202ENST00000380025 RYR1P21817 5038 aa13.7□□□□□ -0.22
NDEL1-202ENST00000380025 FLG2Q5D862 2391 aaPredicted RBP13.7□□□□□ -0.22
NDEL1-202ENST00000380025 LRP1Q07954 4544 aaKnown RBP13.69□□□□□ -0.22
NDEL1-202ENST00000380025 Q8N1X5 172 aa13.69□□□□□ -0.22
NDEL1-202ENST00000380025 DMAC1Q96GE9 116 aa13.68□□□□□ -0.22
NDEL1-202ENST00000380025 TNXBP22105 4242 aa13.67□□□□□ -0.22
NDEL1-202ENST00000380025 PSPHP1O15172 72 aa13.67□□□□□ -0.22
NDEL1-202ENST00000380025 KRTAP10-8P60410 259 aa13.66□□□□□ -0.22
NDEL1-202ENST00000380025 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
NDEL1-202ENST00000380025 C20orf166-AS1Q96NR2 134 aa13.65□□□□□ -0.22
NDEL1-202ENST00000380025 A8MUU9 505 aa13.64□□□□□ -0.23
NDEL1-202ENST00000380025 ACYP2P14621 99 aa13.64□□□□□ -0.23
NDEL1-202ENST00000380025 A8MUN3 132 aa13.61□□□□□ -0.23
NDEL1-202ENST00000380025 FAT3Q8TDW7 4589 aa13.57□□□□□ -0.24
NDEL1-202ENST00000380025 C7orf65Q6ZTY9 151 aa13.56□□□□□ -0.24
NDEL1-202ENST00000380025 Q5VV11 94 aa13.54□□□□□ -0.24
NDEL1-202ENST00000380025 KIAA1109Q2LD37 5005 aa13.52□□□□□ -0.25
NDEL1-202ENST00000380025 BRK1Q8WUW1 75 aa13.52□□□□□ -0.25
NDEL1-202ENST00000380025 PRR15LQ9BU68 103 aa13.51□□□□□ -0.25
NDEL1-202ENST00000380025 LINC01558Q9Y6Z2 57 aa13.49□□□□□ -0.25
NDEL1-202ENST00000380025 PRO0628Q9UI54 55 aa13.47□□□□□ -0.25
NDEL1-202ENST00000380025 CHKB-CPT1BH3BT56 60 aa13.45□□□□□ -0.26
NDEL1-202ENST00000380025 Q75L30 129 aa13.42□□□□□ -0.26
NDEL1-202ENST00000380025 EPPK1P58107 5090 aaKnown RBP13.41□□□□□ -0.26
NDEL1-202ENST00000380025 MT1HL1P0DM35 61 aa13.37□□□□□ -0.27
NDEL1-202ENST00000380025 MYCBP2O75592 4640 aa13.34□□□□□ -0.27
NDEL1-202ENST00000380025 DMBT1Q9UGM3 2413 aaPredicted RBP13.34□□□□□ -0.27
NDEL1-202ENST00000380025 SPINK7P58062 85 aa13.3□□□□□ -0.28
NDEL1-202ENST00000380025 A6NED7 52 aa13.2□□□□□ -0.3
NDEL1-202ENST00000380025 XP32Q5T750 250 aa13.19□□□□□ -0.3
NDEL1-202ENST00000380025 A8MU10 97 aa13.18□□□□□ -0.3
NDEL1-202ENST00000380025 RPL37P61927 97 aaKnown RBP13.18□□□□□ -0.3
NDEL1-202ENST00000380025 KRTAP3-1Q9BYR8 98 aa13.18□□□□□ -0.3
NDEL1-202ENST00000380025 ATP11AUNQ6ZP68 121 aa13.18□□□□□ -0.3
NDEL1-202ENST00000380025 LCA10Q71F78 164 aa13.11□□□□□ -0.31
NDEL1-202ENST00000380025 A0A1B0GU69 56 aa13.1□□□□□ -0.31
NDEL1-202ENST00000380025 KRTAP4-5Q9BYR2 181 aa13.08□□□□□ -0.31
NDEL1-202ENST00000380025 COX6B2Q6YFQ2 88 aa13.04□□□□□ -0.32
NDEL1-202ENST00000380025 CDC42SE1Q9NRR8 79 aa13.04□□□□□ -0.32
NDEL1-202ENST00000380025 SPTSSBQ8NFR3 76 aa12.97□□□□□ -0.33
NDEL1-202ENST00000380025 TPRXLQ17RH7 258 aa12.92□□□□□ -0.34
NDEL1-202ENST00000380025 ABCA13Q86UQ4 5058 aa12.82□□□□□ -0.36
NDEL1-202ENST00000380025 SEC61GP60059 68 aa12.8□□□□□ -0.36
NDEL1-202ENST00000380025 UQCR11O14957 56 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms